Aminobacterium colombiense: Amico_1259
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Entry
Amico_1259 CDS
T01202
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aco
Aminobacterium colombiense
Pathway
aco03030
DNA replication
aco03410
Base excision repair
aco03420
Nucleotide excision repair
aco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amico_1259
03410 Base excision repair
Amico_1259
03420 Nucleotide excision repair
Amico_1259
03440 Homologous recombination
Amico_1259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aco03032
]
Amico_1259
03400 DNA repair and recombination proteins [BR:
aco03400
]
Amico_1259
Enzymes [BR:
aco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amico_1259
DNA replication proteins [BR:
aco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Amico_1259
DNA repair and recombination proteins [BR:
aco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Amico_1259
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amico_1259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
HHH
DNA_pol_lambd_f
MinC_N
Lymphostatin_GT-II
Motif
Other DBs
NCBI-ProteinID:
ADE57380
UniProt:
D5EFP8
LinkDB
All DBs
Position
complement(1281679..1284243)
Genome browser
AA seq
854 aa
AA seq
DB search
MNTLKDKTVLLVDGHALAFRAFYALPELTAPDGTPTNAILGFINMMFKTIDDCHPDMTAV
VFDAPGATFRHEIYPEYKMGRRPTPEEYKVQVPLLQQVVRAMGIKVVVKEGVEADDVIAS
AVCGAARLGVKVIALTSDKDILQVLQPGVRIIRPIKGVSTFTEYNEASFEEEWGFPPTVM
PDYLALLGDAVDNIPGVPGVGEKTAKKLLSQYVSLEDIYDHLDELKPGLQKKFIEAKETA
FKSRELIRLKCDLPLTVEEFTQTEVNFESFEELCRRLGLHKILERVRKSGEYETTKEEVQ
LEIGEAVEGNLAEILHEKELAFYCLPEGFYPMKLEKARIALRAQSGSYWHGVVNAHAAPA
SLLEWLKTGNVITSDYKMMQGFFKEDAPLSDRVWDAQIAHYLLHPDAKSHGPESWAAESI
ADPVEIAGQLWRVKNDLSSNIAQYQGLDKLMRDVEIPLIPVLWRMETWGIGLNRESFNGL
DSDLEIRIVEIEDTIAEKGGERINLNSPKQVAWLLFEKLNMPPIKETKTGYSTDVTVLEE
LVKMGLPEKEVPELILEHRELSKMRSGFVHPLVSAADENTDLIHGTFESTSTGTGRLSSR
DPNLQNLPAFGQWSTRLKEGLVPHKDGNIFVAADYSQVELRVLAHLCDEKRLKEAFEARR
DIHTETASWIFNVNPQMVTPELRRFAKVVNFGLLYGMSSFGLASRLGIGQQEAGDIINRY
FRALPKVRDYIEKSYQDARKRGYAVTDFGRIRPLDEVSVNPRDRGALKRIAVNTPIQGTA
ADIARMAMIKFYKHFEKRQNVHLVLQIHDSLVCECAAEEKEAVVKDLTDIMESAATLSVP
LKVEATWGHSLAEV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccctgaaagataaaacggtacttcttgtagacggccatgcccttgcctttcgt
gccttttatgcattgcctgaactgacggcgccagatggaacgccaacaaacgcgatcctt
ggctttatcaacatgatgttcaaaactatagatgactgccaccctgacatgacagccgtt
gttttcgacgctccaggagctacgttcaggcacgagatctacccggaatataaaatggga
cgtcgccctacacctgaagagtacaaggtgcaagttcccttgctgcagcaagtggtacgg
gctatgggcattaaagtagtggtgaaagaaggggtagaggctgacgatgtcatcgcctcg
gcggtgtgcggcgccgcaaggcttggtgtaaaggttatcgctcttacttcagataaggat
attcttcaggtgcttcagcctggagttcgaatcatccgccccataaaaggggtctcgact
tttacggaatacaatgaggcctcctttgaagaggaatggggtttccctcccactgtcatg
ccagactacttagcccttctaggtgacgcagtggataatataccgggagttccgggagtg
ggagaaaaaacagcaaaaaaactactctcacaatacgtatcactcgaagatatttatgac
caccttgatgaactaaagccagggctgcaaaaaaagtttatagaagcgaaggaaacggcg
tttaaaagtcgcgagctgatacgtttaaagtgcgatctccccttaactgtggaagagttc
acgcagacagaagtgaactttgaatcctttgaagagctctgccggcgtctgggcctgcac
aagattctggagcgggttagaaaatcgggggaatacgaaacaacgaaggaagaggttcag
cttgaaataggcgaagcagtggagggcaacctggcggaaatcctgcatgaaaaagaattg
gccttttactgtcttcctgagggtttttaccccatgaagctggaaaaggcccgtattgcc
ctgcgggcccagagcggaagctactggcatggcgtcgtaaatgctcatgccgcaccagct
tcccttcttgagtggctaaagacaggtaatgtcataacttctgattataaaatgatgcag
ggtttttttaaagaagacgctcctttaagtgaccgtgtgtgggatgcccaaatcgcccac
tatttactgcaccccgacgcaaaatcccacggtccagaaagctgggccgcagaaagcata
gcggatccagtggaaatcgcagggcagctctggagagtaaaaaatgacttaagcagcaat
atcgctcagtatcaaggcctggataagctcatgcgagatgttgagatcccacttattcca
gtgttatggcgtatggaaacgtgggggataggccttaatagagaatccttcaatggtctg
gattcagaccttgaaataagaattgttgaaatagaagataccatagcagaaaagggcgga
gaacggataaatctcaactcgccgaaacaggtggcctggcttctttttgaaaaattgaac
atgccgcctataaaagaaacaaaaacagggtactccaccgacgttaccgttcttgaagaa
cttgttaaaatggggctccccgagaaagaagtgccggaacttatacttgaacaccgcgag
ctttctaaaatgcgatctggctttgttcatccccttgtgagtgccgctgatgaaaataca
gacctgatccacggtactttcgaatccacttctaccggaacaggacgcctgagcagccga
gaccccaacctgcagaacctgccagcctttggacaatggtccacccgtcttaaagagggg
ctcgttcctcataaggacggaaacatatttgtagccgcagactattctcaggtggaactt
cgagttttagcccatctctgtgatgagaaacgtttaaaagaagcctttgaagcacggcgt
gatatccatacagaaacagcatcctggatctttaatgtaaatccccagatggtaacgccg
gaacttcgccgtttcgcgaaagttgtaaacttcggccttctttatggcatgagttctttt
ggcctggcaagccgcctaggcatcggacagcaagaggcaggagatattattaacaggtac
tttagggccctcccgaaggttcgggattatattgaaaaaagctatcaggacgccaggaaa
cgtggttatgctgttacagacttcggcagaatccgtccgctggatgaagtttctgtgaac
ccgcgggatcgaggagccttgaaacgtatcgcagtaaacacccctattcagggaacagct
gctgatattgccagaatggccatgatcaaattttataagcattttgagaaacggcagaat
gttcatcttgttttgcaaattcacgactctctcgtttgtgagtgtgcagcagaagaaaaa
gaagctgtcgtaaaagatttgacagacattatggaatcagcggccacgctatctgtaccc
cttaaagtagaagcaacctgggggcattctctggcagaagtctag
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