Aminobacterium colombiense: Amico_1516
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Entry
Amico_1516 CDS
T01202
Name
(GenBank) GTP-sensing pleiotropic transcriptional repressor CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aco03000
]
Amico_1516
Transcription factors [BR:
aco03000
]
Prokaryotic type
Helix-turn-helix
Other families
Amico_1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_Crp_2
GntR
HTH_11
Rrf2
Ribosomal_S25
TrmB
MarR
HTH_20
MarR_2
GAF_2
SoFic-like_C
HTH_24
HTH_36
HTH_27
Motif
Other DBs
NCBI-ProteinID:
ADE57633
UniProt:
D5EGF1
LinkDB
All DBs
Position
complement(1547404..1548189)
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AA seq
261 aa
AA seq
DB search
MKDLLDKTRQVGRALQSRREGTKPDYSKLAKLLCEFSTANVYIINREGRILVHSWVSEYH
SEAVANFLERGYMPESFVEKMNQHRESILSETDGYLFDDEVASKEAPEKHLLYVPIYSAA
ERLGTLLLVRFFNPFYMKDLILAEYLATLVGIEILHDRTRSIEERARERLVVQMAMRALS
YSEVESVKHIIAELGTYEGVVIASKVADRVGVTRSVIVNALRKLESAGIIESRSLGMKGT
FIKILSPLFIEELGMVLTQNN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgcttgataagactcgccaggtaggcagggcccttcagagtcggcgggaa
gggacgaaaccagattatagcaaactggcaaaacttctttgtgaattctcaacagccaat
gtctatatcattaacagagaagggcggatactagtgcattcatgggttagcgagtatcat
tcagaagcagtggcgaatttccttgaaaggggatatatgccagaaagttttgtggaaaaa
atgaaccagcacagagagtccattttgagtgaaacagatggatatcttttcgatgatgag
gtcgcctcgaaggaagctccagaaaagcatctattgtatgttcctatctatagcgcggca
gaacggctggggacattgcttctcgtaaggttcttcaaccccttctacatgaaagatctc
attttggcagaatatcttgccactctcgtaggtatcgaaatactccatgatcgaacacga
agtatagaagaacgggcgagagaacgccttgtggtacagatggctatgcgtgctctatcc
tactccgaagtagagtctgtaaagcatatcatcgcagagcttggaacttatgaaggagtc
gtcattgcaagcaaagtggcggatcgtgtgggagttacaagaagtgtcattgtaaatgcc
ttgagaaagctggaaagcgctgggattatcgaaagcagaagccttggcatgaaaggaacc
tttattaagatattaagtcctctttttatagaagaacttgggatggttcttacccagaat
aattaa
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integrated database retrieval system
