Aminobacterium colombiense: Amico_1611
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Entry
Amico_1611 CDS
T01202
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aco
Aminobacterium colombiense
Pathway
aco00061
Fatty acid biosynthesis
aco00071
Fatty acid degradation
aco01100
Metabolic pathways
aco01212
Fatty acid metabolism
aco02024
Quorum sensing
aco04146
Peroxisome
Module
aco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Amico_1611
00071 Fatty acid degradation
Amico_1611
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Amico_1611
09145 Cellular community - prokaryotes
02024 Quorum sensing
Amico_1611
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aco01004
]
Amico_1611
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aco04147
]
Amico_1611
Enzymes [BR:
aco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Amico_1611
Lipid biosynthesis proteins [BR:
aco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Amico_1611
Exosome [BR:
aco04147
]
Exosomal proteins
Exosomal proteins of breast milk
Amico_1611
Exosomal proteins of breast cancer cells
Amico_1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DsbA_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADE57727
UniProt:
D5EGP5
LinkDB
All DBs
Position
complement(1645259..1646749)
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AA seq
496 aa
AA seq
DB search
MVIRLENAIWDRLQEDWDKPVLWWSEEWWTGQKLGELTIECKKKLEDEGFGKGHRLAVMM
PNSPMVLALSLAVWSLGGAIVPINTKAGVPTSIGILELVDPFAVVLGAEMEDLEQALTEH
SLTWCLSPLDAPFTAIAGRPSLAGKEDLAVIFATSGTTGLPKAVPLSHGNLMHNAQTVFK
ELTELKEGDILLNVLPNFHSFGFTVAGLMPLICGMKQTVLPSFMPPHKTLETICVSQTNV
LIIVPTMLTFLTSSIDHGAPCPKGVKLIVSGGDRLNVQLDKKVKDYFGVGALEGYGLTEC
SPVVCVNPSYERRKLGTVGPFISGYEWRLTNEAKEDVTLKREGILWVRGASVTSEYFRDP
DKSADRFDGDWFNTGDYVRIDNEGYVQILDRVTDIIIVGGFNVYPQEVEAILQTHPAVEQ
AIVVGIPHQVNGEVPKAFVKKTQGMDLTQREVIEFCKKHLAHYKVPRSVEFMDTFPLSNT
GKVLRRLLKKEACTRS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggttataaggttagaaaatgcaatatgggacaggcttcaagaagattgggacaaaccg
gtcttgtggtggagcgaagagtggtggacaggccagaaacttggggaattgacaattgag
tgtaagaaaaaacttgaagatgagggttttggcaagggtcatcgtttggcagtgatgatg
ccgaactctcctatggttttggcactttcccttgcagtgtggtctttagggggagctatt
gttcccattaatacaaaagccggagttcctacttccataggaattctagagcttgtagat
ccctttgctgttgtgcttggtgccgaaatggaggatttagagcaagcccttacagaacat
tccctaacctggtgtctctctcctctcgacgcgccctttacggctattgccgggcgtcct
tctctggctggaaaagaagaccttgccgtaatttttgccacgtcagggactacaggcctt
cccaaggcggtccccctttctcatgggaaccttatgcataatgctcagactgttttcaag
gagctgacagaactgaaagaaggggatatccttttgaatgtcctccccaatttccattcc
tttggtttcacggtggcagggcttatgccccttatctgcggcatgaaacagacagtattg
ccttctttcatgccccctcataaaactcttgagactatatgtgtgtctcagaccaatgtg
ttgatcattgttcctacaatgttaaccttccttacctcttccattgatcatggagctcct
tgcccaaagggtgtgaagcttatcgtaagcggaggagacagactcaacgtccagctggat
aaaaaagtgaaggattactttggtgtcggggcccttgaagggtacggcctgacagagtgt
tctccagttgtttgtgtcaatccatcttatgagcggcgcaagctcgggacagtggggccc
tttatctctggttacgaatggcgtttgactaacgaagcaaaagaagatgtaacgttaaaa
agagaggggatcctatgggttagaggggcttcggtgacgtctgagtactttagagatccg
gataaatccgcagatcgctttgacggcgactggttcaacacgggagactatgtgcgtatt
gataacgaagggtatgtacagatccttgatcgtgtgacggatattatcattgttgggggt
tttaatgtatatcctcaggaggtagaggctattctgcaaactcatcctgccgttgaacag
gcaattgttgtgggtattcctcaccaggtcaatggagaagtgcccaaggcgtttgtaaaa
aaaacccaggggatggatctgacccaaagagaagttattgaattctgcaagaaacatctt
gcccactataaagtgccaagaagcgttgagtttatggatacttttcctctttccaacacg
gggaaggtgttacgccgtcttctaaagaaagaagcttgtacccgatcataa
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