Aminobacterium colombiense: Amico_1688
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Entry
Amico_1688 CDS
T01202
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aco03000
]
Amico_1688
Transcription factors [BR:
aco03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Amico_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_5
HTH_24
MarR
MarR_2
HTH_11
HTH_DeoR
Fe_dep_repress
TrmB
Rrf2
HTH_23
HTH_20
Dimerisation
HTH_27
HTH_34
TFIIE_alpha
DUF7343
HTH_AsnC-type
HTH_29
AprA_N
DUF742
HTH_Crp_2
HTH_9
Penicillinase_R
HTH_28
Sigma70_r4
HTH_69
Ribosomal_S25
Motif
Other DBs
NCBI-ProteinID:
ADE57804
UniProt:
D5EGX2
LinkDB
All DBs
Position
1730905..1731699
Genome browser
AA seq
264 aa
AA seq
DB search
MEQAKKNPPVLSVIKALKILELLNEKGTLTISEISASLKINKSTVSRLLSTLSEGGYTKR
ISRNTGYVNTLKLFEMGNREVERLGIWQMAQPYLKHLACETRETINLAILSGASLIYIDK
IESPDAVRVGLGSSKRVPAYCTGLGKAMLAFMEKEKVKKILSTVDFVHFTPTTITSPELL
FKNFEEIRERGVAYDDCEYEEGLACVAAPIINARNEVVASMSIAYPRSRYGKNSSEERAF
SNLIRNVTHSFSLDLRYMGDNLIF
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttggaacaagctaaaaaaaacccaccagtactctccgtaataaaagccttgaaaattctg
gaactccttaatgaaaagggcacacttactatatcggagatcagtgcctccttaaagata
aataaaagcactgtttccaggcttctatctactctttccgaggggggatatacaaaaagg
atttctcgcaataccggctacgttaacaccttgaaattattcgaaatgggaaacagagaa
gttgaacgccttggcatatggcaaatggctcaaccttatcttaagcatttagcatgtgaa
accagggaaaccataaacctggctattttatcaggagcctcactaatatatattgataag
atcgaaagccctgatgcagtgcgagtagggctcggctccagcaaaagggttcccgcatac
tgcacaggccttggcaaagccatgctcgcatttatggaaaaagaaaaggttaagaaaata
ttgagcacggtggattttgtgcattttacacctacaaccatcacttcacccgagctcctt
ttcaagaattttgaagagataagagaacgaggtgttgcctacgacgactgcgagtacgaa
gaaggactagcctgtgtcgctgctcccataatcaacgcaagaaacgaagtggttgcatcc
atgagcatagcgtaccctcgctctcgctatggaaaaaacagctcagaagagagggctttt
tctaatcttattcgtaatgtaacacattctttttctctggatctcagatatatgggggat
aatctgatcttttaa
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