Alterisphingorhabdus coralli: RB602_00095
Help
Entry
RB602_00095 CDS
T10589
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB602_00095 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoa03019
]
RB602_00095 (recQ)
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_00095 (recQ)
Enzymes [BR:
acoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB602_00095 (recQ)
Messenger RNA biogenesis [BR:
acoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RB602_00095 (recQ)
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB602_00095 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOE75155
UniProt:
A0AA97I1W2
LinkDB
All DBs
Position
complement(14753..16528)
Genome browser
AA seq
591 aa
AA seq
DB search
MTATTITDPQEILRQTFGFSGFRGKQEAVVSRVLRGENTLAVMPTGAGKSLCYQLPALAR
SGTAIVISPLIALMHDQIRAAKAVGIRAAAMTSADHDNAATADRLRRGELDLLYIAPERA
TMGAFQNLLSAIDISLFAIDEAHCVSEWGHDFRPDYRLLRPLLDQFQHVPRLALTATADK
VTREDILHQLGIPLEGLVLAGFDRPNIRYAITPRKNAGKQIIDFLARNPGAGIVYAPSRK
KTETIAAQIAATGRPVGVYHAGLPPEQRAAAQAEFVRSEDMVMVATIAFGMGIDKPDVRF
VIHAGLPKSLEAYYQETGRAGRDGDPAEAQLFWGATDFAQARQWLGEIEENRLAAERARL
NALAALVETPGCRRAILLKHFGEDPPETCDNCDNCDNPPTVLNVSEMAQKLLSAVYRTGQ
SFGIMHLEKVLTGQPDDKVLARGHDRLSVFGIVSAEDAPLLRPVMRTLMAHEMLVTTDHG
GLALGPTARPVLRGEQRVSIAEPPKKKPRNRVRSQTPNPVGDPLFDALRAKRTELAQERN
VPPYVIFHDSVLRAMASDRPVSPMEMAQISGVGTKKLEAYGDAFLDVIRRF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaccaccataaccgatccgcaggagattctgcgtcagacctttgggttttct
ggctttcgcggcaagcaggaagcggtggtcagtcgggtattgcgcggtgagaatacgctc
gcggtgatgcccaccggcgcggggaaatcgctgtgttatcagctccctgcattggcgcga
tccggcaccgcgattgttatctcaccgctgattgcgctgatgcatgatcagatccgcgcg
gccaaggcagtggggatcagagcagcagcgatgacctctgccgatcacgataatgcggcc
actgcggaccggttacgccgcggtgaactggatctgctctatatcgcccccgaacgagcc
acaatgggcgcatttcagaacctgctgtctgccatagacatctctctatttgctatcgac
gaggcgcattgtgtctctgaatgggggcatgatttccgccccgattatcgcctgctgcgt
ccgctgcttgaccagttccaacatgtgccaaggctggcgctgacggcgacggcagataag
gtaacgcgcgaggatattctgcatcagctcggtatcccgctagagggcctggtgcttgcc
gggtttgaccgccccaatatccgctacgccatcaccccgcgcaaaaatgccggtaagcag
attatcgactttctcgcccgtaatccgggtgccgggattgtctatgcaccaagccgcaaa
aagaccgagacaattgccgcgcagatcgccgccaccggtcgcccggtgggcgtctatcat
gccggtcttccgccggagcagcgcgctgcggcgcaggcggaatttgtgcgttcagaagat
atggtgatggtcgccaccatcgcttttggcatggggatcgacaagcccgatgtgcgcttt
gtgattcatgctggcctgcccaaatcgcttgaggcctattatcaggaaaccgggcgcgcg
ggccgcgatggtgatccggcagaggcacagcttttctggggtgcgaccgattttgcccag
gcgcggcaatggctcggcgagattgaggaaaaccgtctggcggccgagcgggcgcggctt
aatgcgctggcggcattggtcgaaacaccgggttgccgccgtgcgatattgctcaagcat
ttcggtgaagacccgcccgagacctgtgacaattgtgataattgcgacaatccgcccact
gtactcaatgtctccgagatggcgcaaaagctgttaagcgccgtctatcgcaccgggcag
agctttggcattatgcatctggaaaaggtgctgaccggtcagccggatgacaaggtgctg
gcgcgcgggcatgatcggctatcggtgttcggcattgtcagcgccgaggacgcgcctctg
ctgcgtcccgtcatgcggacgttgatggcgcatgaaatgctggtgactaccgatcatggc
gggcttgctttggggccaacggcgcggccggtgctgcgcggtgagcaacgggttagcatc
gcagaaccgccaaagaaaaagcctcgcaatcgcgtgcgctcacagacacctaatccagtt
ggcgatccgctgtttgatgctttgcgcgccaaacgcaccgaactggcgcaagagcgcaat
gtgccgccctatgttatctttcacgacagcgtgctgcgcgctatggccagcgaccggcct
gtctcgcccatggaaatggcgcagatttccggcgttggtacgaaaaagctggaggcttat
ggtgatgcgtttctggatgtgatccggcggttttag
DBGET
integrated database retrieval system
