Alterisphingorhabdus coralli: RB602_01690
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Entry
RB602_01690 CDS
T10589
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB602_01690 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoa03021
]
RB602_01690 (rho)
03019 Messenger RNA biogenesis [BR:
acoa03019
]
RB602_01690 (rho)
Transcription machinery [BR:
acoa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RB602_01690 (rho)
Messenger RNA biogenesis [BR:
acoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RB602_01690 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
Spore_III_AA
AAA_22
S1CSD-TOTE-2
ATPase_2
Fungal_virus_P2_C
AAA
AAA_25
GpA_ATPase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WOE75452
UniProt:
A0AA97I0X2
LinkDB
All DBs
Position
complement(363917..365173)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKELKQKTPAELVSMAEELGVEGASTMRRQDLMFGILKQLAEDGEQIMGLGTIEVLSD
GFGFLRSPEANYLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRGPRDGERYFALTKLTEVN
FEDPQAVRTRVNFDNLTPLYPDQKLSLDTLDPTVKDKSARVIDIISPQGKGQRALIVAPP
RTGKTVLLQNIAKAITDNHPEVYLLVLLIDERPEEVTDMQRSVNGEVISSTFDEPASRHV
QVAEMVIEKAKRLVEHKHDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEEILVEKDTLSKMWVLRRILMQMGTIDAMEFLLDKMKDSKTNEDFFDSMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaaagaactaaaacagaaaacccctgctgaactcgtctccatggcggaagaa
ctgggggttgaaggcgcctcaaccatgcggcgtcaggatctgatgtttggcattctcaaa
caactggctgaggatggcgagcagattatgggtctcggcacgattgaagtgctgtccgat
ggctttggctttttgcgctcacccgaagccaattatcttgccggccccgatgatatctac
gtatcccccaatcaggttcgcaaattcggtctgcgcaccggtgatacggtagagggcgaa
attcgcgggccgcgtgatggcgagcgctattttgctctgaccaagcttaccgaagttaat
tttgaagatccgcaggcggtccgcacccgtgttaacttcgacaatttgaccccgctttat
cccgatcagaagctgtcgctggatacgcttgatccgacggtgaaggacaaatcggcgcgg
gtgatcgatatcatctcgccccagggtaaaggccagcgcgcactgatcgtcgcgccgccg
cgtaccggtaaaacggtgctgttgcagaatattgccaaggcgattaccgacaatcacccc
gaggtctatctgctggtgctgctgattgacgagcgcccggaagaagtgaccgatatgcag
cgctcggtcaatggcgaggtgatcagctccacctttgatgagcccgccagccgccacgta
caagtcgctgaaatggttattgaaaaggccaaacgcctagtcgagcataagcatgatgtg
gtcatcctgctcgactcgattacacgactgggccgcgcctataatacagtggtccccagc
tcgggcaaggtgctgaccggcggtgtcgatgccaatgccttgcaacgccccaagcggttc
tttggcgcagcgcggaatattgaagagggcggttcgctctcgattatcgcaaccgccctg
atcgatactggcagccgcatggacgaggtgatctttgaggaattcaagggcaccggcaac
agcgagatcgtgctcgatcgcaaggttgctgacaagcgcatcttcccggcgctcgatgtc
ggcaagtccggcacgcgtaaggaagaaattctggtcgagaaggatacgctcagcaagatg
tgggtcttgcgccgcatattgatgcagatgggcaccatcgacgcgatggaattcctgctc
gacaagatgaaggattccaagaccaacgaagatttcttcgatagtatgaaccagtaa
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