Alterisphingorhabdus coralli: RB602_03525
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Entry
RB602_03525 CDS
T10589
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RB602_03525 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_03525 (uvrB)
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB602_03525 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB602_03525 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
AAA_16
DUF87
SWI2_SNF2
FATC
Kinesin
AAA_22
AAA_33
SRP54
Microtub_bd
eIF3_p135
Flavoprotein
Motif
Other DBs
NCBI-ProteinID:
WOE75797
UniProt:
A0AA97I184
LinkDB
All DBs
Position
complement(768474..770657)
Genome browser
AA seq
727 aa
AA seq
DB search
MSELIIRRGLDEPNTSGEFVPHKPARPEKAEGGQPFKLVSDYAPAGDQPAAIAELVETAR
EGEKDQVLLGVTGSGKTFTMAKVVEELQRPALVLAPNKILAAQLYGEFKQFFPDNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRSLLERDDVLIVASVSCLYGIG
SVETYSAMIFEIKKGETVDQRELIRKLVALQYKRNDAAFARGTFRVRGDNLEIFPSHYED
MAWRISFFGDEIEEIAEFDPLTGKKGTKLDKVKVFANSHYVTPGPTMKQATEAIKFELAE
RLKELETEGRLLEAQRLEQRTHFDLEMIGATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTIPQVGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VCVSATPGSWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEEQVDDLINEARLTAEKGYRT
LVTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRVTGSMERALNETS
RRREKQLAFNEEHGITPQTIKKNIGDIVGHVTNQDSVTVDTGDEETPHLVGHNLRAYIEE
LEKRMRDAAADLEFEEAGRLRDEIRRLEADELGLPEGEHKAPMKGRATEGKPGTRKMRYG
RTQRKMG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttgattatccgacgcgggctggatgagcccaataccagtggcgaatttgtg
ccgcacaaacctgcccggccggaaaaggccgagggcgggcagccgttcaagctggtcagc
gattatgccccggcgggtgaccagccggccgcgattgccgagctggtggagacggcgcgc
gaaggcgagaaggaccaggtgctgctcggtgtcactggatcgggcaagaccttcaccatg
gccaaggtggtcgaggaattgcagcgtccggcgctggtgctggcgccgaacaagattctc
gctgcgcagctttatggcgagttcaaacagttcttccccgacaatgcggtcgaatatttc
gtcagctattatgactattatcagcccgaagcctatgtgccgcgctctgacacctatatc
gagaaggaaagctcggtaaacgaggcgattgaccggatgcgccactccgccactcgctcg
ctgctcgagcgcgatgatgtgctgatcgtcgcctcggtctcctgcctttatggtatcggc
tcggttgagacctattcggcgatgatcttcgagatcaaaaaaggcgagacggtcgaccag
cgcgagctgatccgcaagctggtggccttgcagtataagcgcaatgacgctgcctttgcg
cgcggcaccttccgagtgcgcggcgacaatctggagattttcccgtcgcactatgaggac
atggcatggcgcatttcctttttcggcgatgaaattgaggagattgccgagtttgatccg
ctgaccggcaaaaagggcaccaagctcgacaaggtcaaggtgttcgccaattcgcactat
gtgacaccggggccgacgatgaaacaggcaaccgaagcgatcaaattcgagttagcggag
cggttgaaggaactcgaaaccgagggcagactgcttgaggcgcagcgtctggaacagcgc
acccatttcgatctggagatgattggggccaccggttcctgcgccggtattgaaaactat
tcccgcttcctcactggccgtctgcccggcgagccgccgccgactttgttcgaatatctg
cccgacaacgccctgctgttcgtggacgaaagccaccagacgattccgcaggtcggcgca
atggcgcggggcgaccatcggcgcaagatcacgctcgccgaatatggcttccgcctgccc
agttgcatcgacaatcgaccgctgcgtttcaatgaatgggacgcgatgcggccacaaacg
gtatgtgtctcggctactcccggaagctgggagatggagcaaaccggcggcgtattctcc
gaacaggtgatccgccctactggcctgatcgacccgccggtcgagatcaagccggtcgag
gagcaggttgatgacctgatcaacgaagcacggctaaccgccgagaaaggctatcgcacg
ctggtgacgacgctgaccaagcggatggccgaagacttgaccgaatttatgcacgaggcg
ggcatcaaggtgcgctatatgcactcggacgtcgagacgctggaacgtatcgagctgatc
cgtgatttgcgccttggtgtttatgatgtgctggtcggcatcaacctgctgcgcgagggg
ctggatattcccgaatgcgggctggtcgccattctcgatgccgacaaggaaggctttcta
cgctccgaaacctcattgatccagaccattggccgcgccgcgcgcaatgttgatggccgg
gtgatcctctatgccgaccgcgtcaccggcagcatggaacgcgcgctcaacgaaaccagc
cgccgtcgcgaaaagcagctcgcctttaacgaagaacacggcatcacgccgcaaacgatc
aagaagaatatcggcgatattgtcggccatgtgaccaatcaggacagcgtgaccgtcgac
accggcgatgaagaaacgccgcacctagtcggccacaatctgcgcgcctatatcgaggaa
ctggaaaaacgcatgcgcgatgcggcggcagacctggagttcgaggaagcgggccggtta
cgcgatgagatccggcggcttgaagcggatgagcttggcttacctgaaggtgagcataaa
gcgcctatgaaaggccgcgcgaccgagggcaagccgggcacacgcaagatgcgctatggg
cggacgcagcggaagatggggtga
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