KEGG   Alterisphingorhabdus coralli: RB602_03815
Entry
RB602_03815       CDS       T10589                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
acoa  Alterisphingorhabdus coralli
Brite
KEGG Orthology (KO) [BR:acoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acoa03400]
    RB602_03815
Enzymes [BR:acoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RB602_03815
    5.6.2.6  RNA 3'-5' helicase
     RB602_03815
DNA repair and recombination proteins [BR:acoa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RB602_03815
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WOE75851
UniProt: A0AA97F7Z3
LinkDB
Position
833696..836128
AA seq 810 aa
MLDLDPPLPQAITQWFSERGWSPRRHQLEMVDVARQGRHALLVASTGAGKTLAGFLPSLA
ELIETPVHDGLHTLYVSPLKALAHDIQRNLTMPVEEMGLDIRVEARSGDTPSDRKKRQRE
KPPQILLTTPESLSLLLSYPESATLFASLKRVIVDEVHAFATGKRGDLLALSLARLRTLA
PDAQRVALSATVADPDGYRAWLAPHGDLDSVALVEGEAGADPDLDIMLPEGRVPWSGHSG
HYAIPQVLEEITRNRTTIVFCNTRFLAEFIFQRLWELNEDALPIGLHHGSLSVEARRKVE
GAMARGELRALVATASLDLGVDWGDVDCVIQMGAPKGSSRLLQRIGRANHRLDEPSKAVL
VPGNRFEYLEAQAAYDAVDAGQRDGEGFRPGGLDVLAQHVMAVACAGPFHEEALRDEVRS
ALPYSGYDDDAFARVLSFVENGGYALRAYDKFKRLRRDKDGVWHLAHPRFAAQHRLNAGT
IVDVPMLEVRFKNGRKLGKVEEMFAAQLSPGDTFFFAGMSLEVEQIKDLDLIVRASKNAA
QIPSYMGARMPLTTHLADRVRGLLTDRTGWVRFPDDVREWLEMQDWRSTLPEPGQLLVET
FPHRQRHYMVCYPFEGWNAHQSLGMLITRRMEDKGLQPLGFVANDYALAVYGLQPIRDPG
ALFSADILTDEFIQWVESSYLLKRAFREVAVISGLVERQHPGKRKTGKQVTFSTDLIFDV
LAKYEPDHVLMQAAWADARAKMTDVGRLGDLLDRAQETILHIDLDRVTPMAVPVLTMIGR
ESVAQGAADDALLLEAETLAATAMRGDVPE
NT seq 2433 nt   +upstreamnt  +downstreamnt
gtgcttgatctcgatcctcccttaccccaagccataacccaatggttttcggaacgcggt
tggtcgccgcggcggcaccagctggagatggtcgatgtggcgcggcaggggcgccatgcg
ttgctggtggcgtccaccggtgcgggcaagaccttggccggatttctgccctcgctggcg
gagctgatcgagacgcctgtccatgacggcctacacaccctctacgtctcgccgctcaaa
gcattggcccatgatattcagcgcaaccttaccatgccggttgaggaaatgggccttgat
atccgtgtcgaggcacgcagcggggatacgccttcggatcgcaaaaaacgccagcgcgaa
aagccgccgcagatattgctgacgacgccggaatcgctgagccttttgctgagctatccc
gagagtgcgacgctgtttgccagcctcaaacgcgtgatcgttgatgaggtccatgctttt
gccaccggtaagcgcggcgatctgctggcattatcgctggcgcggttgcgtacccttgcg
ccagacgcacagcgcgtcgccctgtccgctaccgtggccgatcccgatggctatcgcgcc
tggcttgcgccgcatggtgatctggacagtgtggcgctggttgaaggtgaggcgggcgcc
gatcccgacctcgatatcatgctgcctgagggccgggtgccctggtcgggccatagcggc
cattatgccattccgcaggtcttggaagaaatcacccgcaaccgcaccaccatcgtcttt
tgcaatacgcgctttctcgcagagtttatctttcagcggctttgggagttgaatgaggac
gcgctacccattggcttgcaccatggctcgctctcggttgaggcgcggcgtaaggtggaa
ggcgcgatggcgcgtggcgaattgcgcgctctggtggcgaccgccagcctcgatcttggc
gttgattggggcgatgtcgattgcgtcatccagatgggtgcgcccaaaggctcctcgcgc
ctgttgcaacgtatcggccgcgccaatcaccggcttgatgaaccgagcaaggcggtattg
gtcccggggaaccgcttcgaatatctcgaagcccaagccgcctatgatgcggtggatgcg
ggtcagcgtgatggcgaaggctttcgccccggcgggctcgatgtgctggcgcagcatgtg
atggcagtggcctgtgccggtccgtttcatgaggaggccttgcgcgatgaggtgcgctcg
gcgctgccttattctggctatgatgatgacgcctttgcccgggtgctgagctttgtggaa
aatggcggctatgcgctgcgtgcctatgacaagttcaagcggctacggcgcgataaggat
ggcgtctggcatctggcgcatccgcgtttcgcggcgcagcatcggctcaatgcgggcacg
attgtcgatgtgccaatgctggaagtgcggttcaaaaatggccgcaaactgggcaaagtc
gaagagatgttcgccgcgcaactgtcgccgggcgatacgtttttctttgccggtatgagc
ctcgaggtcgagcagatcaaagatctcgacctgatcgtccgtgccagcaagaacgcggcg
cagatccccagctatatgggcgcgcggatgccgctgaccacgcatcttgctgatcgggtg
cgcgggctgctgaccgaccgcaccggctgggtgcgcttccccgatgatgtgcgcgaatgg
ctggagatgcaggattggcgctcaaccttgcccgagccgggacagctattggttgagacc
ttcccgcaccgccagcgccattatatggtgtgctacccctttgaaggctggaacgcgcat
caatcgctcggcatgcttattacccgccggatggaggataagggcctgcagcctttgggc
tttgttgccaatgattatgcgctggcggtctatgggctgcagccgatccgcgatccgggg
gcgctgttttccgcagatatcctcacagatgaattcatccaatgggtcgagagcagctat
ttgctcaaacgcgcctttcgtgaggtggcggtgatatccggtctggtagagcgtcagcat
ccgggcaaacgcaaaaccggtaaacaggtgaccttctcgaccgacctgatcttcgatgta
ttagccaaatatgagcccgatcatgtgctgatgcaggcggcatgggccgatgcacgcgcg
aagatgaccgatgtcgggaggctgggtgacttgctcgatcgggcgcaggagacgatcctg
catatcgaccttgaccgggtgacgcccatggcggtgccggtgctgacgatgatcgggcgt
gaatctgtggcgcagggcgcggcggatgatgctctgctgctggaggcggaaacactggcg
gcaaccgcgatgcgtggggatgtaccagaataa

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