Alterisphingorhabdus coralli: RB602_05760
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Entry
RB602_05760 CDS
T10589
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa00300
Lysine biosynthesis
acoa00470
D-Amino acid metabolism
acoa01100
Metabolic pathways
acoa01110
Biosynthesis of secondary metabolites
acoa01120
Microbial metabolism in diverse environments
acoa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB602_05760 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB602_05760 (lysA)
Enzymes [BR:
acoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RB602_05760 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOE76216
UniProt:
A0AA97F971
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All DBs
Position
1237845..1239104
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AA seq
419 aa
AA seq
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MDHFQLKNGVLHAEDIPLTELAEIYGTPVYIYSAATLRRHAQVFREALKPAGRVHLAFAV
KANPNLAVLNILADEGYGADVVSAGELNRALQAGVAPEDIVFSGVGKTADEMRHGLQTGI
GQFNIESAEEGHELAAIAAEMGQTPAIALRVNPDVDAATHAKISTGKAENKFGVAIDQAP
ALYAELSAKPSLNMRGIAVHIGSQLLSLDPLEQAFGKVGDLVQTLRGQGLTVSHVDLGGG
LGVPYAPGEVPPSPADYGAMVARVTRDWDVTLMFEPGRVIAGNAGVMLTRVIRVKQALGN
PFVVVDGAMNDLARPALYDAWHDFVAVQPNGETMAAHIVGPVCETGDTFARDREIDAVAA
GDLAIFRTAGAYGATLASTYNSRALVPEVLVDGSNHALVADRIDPATIMAAERVPEWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttcagttgaagaacggtgtgctccacgccgaagatattcccctgaccgaa
ttggccgagatttacggcacgccggtctatatctattccgccgcaacgctgcgtcgccat
gcccaggttttccgagaggcgctaaagcctgcgggccgggtgcaccttgcctttgcggta
aaggccaatcccaatttggcggtgctgaacatccttgctgatgaaggctatggcgccgat
gttgtctccgctggcgaattgaaccgcgctctacaggcgggggttgcacccgaagatatt
gtcttttccggcgtcggcaaaaccgccgatgagatgcgccatgggctgcaaaccggtatt
ggtcagttcaatattgagtcggccgaagaagggcatgagcttgccgccattgccgccgag
atggggcagacgcctgcgattgcgttgcgggttaatcccgatgtggacgctgccacccat
gccaaaatctcgacgggcaaagcggagaacaagtttggcgtggcgatagatcaggcgccg
gcgctttatgccgaactgtcggccaagccatcgctcaatatgcgcggcatcgcggtgcat
attggcagccaattgctgtcgctcgatccgctggaacaggcttttggcaaggtcggcgat
ctggtgcagacgctgcgtgggcaaggtctcacggtaagccatgtcgatctcggcggtggt
ctgggcgtaccctatgccccgggcgaggtgccaccatcgcctgccgattacggcgccatg
gtcgcccgcgttacccgtgactgggatgtgacgctaatgttcgaaccgggccgggtgatt
gccggtaatgccggggtgatgctgacacgggtcatccgggtgaagcaggcgctgggcaat
ccattcgtggtcgtggatggcgcgatgaatgatctggctcggcctgcactttatgacgct
tggcatgattttgtcgcggtacagcccaatggcgaaacaatggccgcgcatattgtcggc
cctgtctgcgagactggcgataccttcgcccgcgatcgcgagattgatgccgtggctgct
ggcgatctcgctattttccgcaccgccggggcctatggcgcaacattggccagcacttat
aacagtcgcgcgcttgtgccggaggttttggtcgatggcagcaatcacgcgctggttgcg
gatcgcatcgacccggccaccatcatggccgctgagcgcgtacccgaatggctcaaataa
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