KEGG   Alterisphingorhabdus coralli: RB602_05940
Entry
RB602_05940       CDS       T10589                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
acoa  Alterisphingorhabdus coralli
Pathway
acoa00010  Glycolysis / Gluconeogenesis
acoa00020  Citrate cycle (TCA cycle)
acoa00260  Glycine, serine and threonine metabolism
acoa00280  Valine, leucine and isoleucine degradation
acoa00310  Lysine degradation
acoa00380  Tryptophan metabolism
acoa00620  Pyruvate metabolism
acoa00630  Glyoxylate and dicarboxylate metabolism
acoa00640  Propanoate metabolism
acoa00670  One carbon pool by folate
acoa00785  Lipoic acid metabolism
acoa01100  Metabolic pathways
acoa01110  Biosynthesis of secondary metabolites
acoa01120  Microbial metabolism in diverse environments
acoa01200  Carbon metabolism
acoa01210  2-Oxocarboxylic acid metabolism
acoa01240  Biosynthesis of cofactors
Module
acoa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
acoa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
acoa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
acoa_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:acoa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RB602_05940 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RB602_05940 (lpdA)
   00620 Pyruvate metabolism
    RB602_05940 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RB602_05940 (lpdA)
   00640 Propanoate metabolism
    RB602_05940 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RB602_05940 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RB602_05940 (lpdA)
   00310 Lysine degradation
    RB602_05940 (lpdA)
   00380 Tryptophan metabolism
    RB602_05940 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RB602_05940 (lpdA)
   00670 One carbon pool by folate
    RB602_05940 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoa04147]
    RB602_05940 (lpdA)
Enzymes [BR:acoa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RB602_05940 (lpdA)
Exosome [BR:acoa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RB602_05940 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 FAD_binding_2 GIDA NAD_binding_8 HI0933_like AlaDh_PNT_C FAD_binding_3 Thi4 40S_S4_C DAO
Other DBs
NCBI-ProteinID: WOE76252
UniProt: A0AA97FAG8
LinkDB
Position
complement(1272821..1274227)
AA seq 468 aa
MSNEFDYDVLVIGSGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHAS
ELYEEAHSGALEKFGIKLTGAKLDLNQMMAEKDEAVSGLTGGIEFLFKKNKVTWLKGHAS
FEDANTVKVGDETVRAKNIIIATGSSVTPLPGVEVDNGKGIVVDSTGALSLPKVPDHLVL
IGGGVIGLELGSVWRRLGAKVTVVEYLDQILPGMDGEVRKESAKLFKKQGFDIKTGTKVT
GVTVKGKKATVSIEPAAGGDTETLSADAVLVCIGRSPNTEGLALEKAGLATNNRGQIEVG
HDFATSVSNIYAIGDVIPGPMLAHRAEDEGIAVAENIAGQTGIVNHDLIPGVVYTHPEIA
NIGKTEEELKEAGVKYKKGKFPFMGNSRAKTNRDTDGFVKVLADAETDRVLGVHIISSLA
GTMIAQVVQAMEFGATSEDIAYTCHAHPTHSEAVKEAAMAVTGKPIHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagcaacgaattcgactatgatgtactggtaatcggctccggccccggtggctatgtc
gccgccattcgtgctgcacagctcgggctgaagaccgcctgtgccgaaagccgcgagacg
ctgggcggtacttgcctcaatgtcggctgcatcccttccaaagcgctgctccacgcttct
gaactgtatgaagaagcccatagcggcgcgcttgagaaatttggcatcaagctcaccggt
gccaagctcgatctcaaccagatgatggccgagaaagacgaagccgtgtctggcctcacc
ggcggcatcgaatttctgttcaagaagaacaaggtgacctggctcaaaggccatgccagc
tttgaagatgccaacacggtcaaggtcggcgacgagacagtgcgcgccaagaatatcatt
atcgctaccggctcatcggtcacgcccctgcccggcgtcgaggtcgataatggcaaaggc
attgtcgttgattccaccggagcgctgtcattgccaaaagtgcctgaccatctggtgctg
atcggcggtggcgttatcggcctggaactcggcagcgtctggcggcgtctcggtgccaag
gtcactgtagtcgagtatctcgatcaaatcctgcccggcatggacggcgaagtgcgcaaa
gagtcggccaagctgttcaagaaacagggctttgacatcaaaaccggcaccaaggtgaca
ggcgttaccgtaaagggcaaaaaggcgacggtcagcatcgagccggctgcaggtggcgac
actgaaacactgtccgctgatgcggttctggtgtgcattggccgcagcccgaacaccgag
gggctggcactggaaaaagccggtctggccaccaataatcgcggtcagattgaggtcggt
cacgactttgcgaccagcgtttccaatatctacgccattggcgatgtaatcccggggccg
atgctggcgcaccgtgccgaggatgaaggcattgcggttgcggaaaacattgcgggccag
acgggtatcgtcaatcacgacctcatccctggcgtcgtctatacccatccggaaatcgcc
aatatcggcaagaccgaagaagagctgaaagaggcgggcgttaaatacaaaaagggtaaa
ttccccttcatgggcaatagccgcgccaagaccaatcgcgacactgacggcttcgtcaag
gttctggccgatgccgaaaccgaccgggttctcggcgtgcatatcatctcctcgctcgcg
ggcacgatgatcgcacaggtcgttcaagcaatggaattcggcgcaacatccgaggacatc
gcctatacctgccacgcccacccgacgcacagcgaagcggtgaaagaagcggcgatggcg
gtgaccggcaaaccgatccatatctga

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