Alterisphingorhabdus coralli: RB602_06010
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Entry
RB602_06010 CDS
T10589
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03018
RNA degradation
Brite
Enzymes [BR:
acoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RB602_06010
Messenger RNA biogenesis [BR:
acoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RB602_06010
Ribosome biogenesis [BR:
acoa03009
]
Prokaryotic type
rRNA processing factors
RB602_06010
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GFIT
Other DBs
NCBI-ProteinID:
WOE76266
UniProt:
A0AA97F9Y7
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Position
complement(1288029..1290689)
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AA seq
886 aa
AA seq
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MTTRMLIDARHQEETRVAVTKGNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPKEDKDKLLAEEAEHAAEEAALRAAEEERGETGEDDDGD
YSRAFADELAEDHGMLDEKAEEKLSEPEAPELPDDDDDDADGESSDEEAEAKGEDDSEGD
KAEGGKKRRRGGRSRRGNRRGKGAARASDEVRSKRMALRRRYKIQDVIHRRQVVLVQVMK
EERGNKGAALSTYLSLAGRYCVLMPNSAHGGGISRKISSAGDRKRLKGIIAELNLPSSMG
CIVRTAGLSRTKTEIKRDFDYLARLWDGIRENTLKASAPAQIHSDSDLIKRAIRDIYNRE
IEEVMVEGDDGYRAAKDFMKLLMPSHARRVKHYADPIPLFQRYGAEDQLNAMYEPMVQLK
SGGYLVINPTEALVSIDINSGRSTREHGIEATAVNTNLEAAREIARQLRLRDMAGLVVID
FIDMERSGNIRKVEKAMRDALKSDRARIQVGRISGFGLLEMSRQRLRTGVLEASTRVCPH
CDGTGFVRTASSSGLAALRLLEEEAAKGKGSQLVLRTSQEASIYVLNHKRAGIGEIEERY
GVTIEVLPTDDIEGAKMTVEVSGPKPTVTVDYAPIIDPVEEEEEEQTVENREEDEDRPKR
KRRRRRRGKRGGENRDKRDDQQDEASPADSDAPAENADDEGEVKDEKPKRKRRSRRRKSD
DEAVNEGEATEQSEADTAEDSDAEEKPKKRTRRRKSEAAKADDTDDSTSVEAPEADTEEK
PKRRKRKTAAEKRAEEAGAENAEPDAIEADDKPKASKPRKARTSAAKSADAEEKPSTAKK
PRKAAAKESADEAAPQEAANDRNGDSAESAGDEKPKKGWWQRTFGN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcgtatgctgatcgatgcgcgccaccaggaagaaacccgggtggcggtaacc
aagggaaaccgcattgaagaattcgactttgagtcggcagaacacaagcaaatcaaaggc
aatatctatcttgccaaagttacccgggtagagccttcactacaggcagcttttgtagat
tatggcggcaatcgccatggcttccttgccttttccgagatccacccggactattatcag
atccccaaggaagacaaggacaagctgctggcggaagaggcagagcatgctgctgaagaa
gccgctctgcgcgccgccgaggaagaacgcggcgaaaccggcgaggatgatgacggcgat
tacagccgtgcctttgctgatgagctagccgaagatcatggcatgctcgatgaaaaggcc
gaagaaaagctgagcgagccggaagcgcctgaactgcccgacgacgatgatgatgacgca
gatggcgaatcatcggacgaagaagccgaagccaagggcgaagacgatagcgaaggcgac
aaagccgagggcggcaagaaacgccgtcgcggtggtcgctcgcgtcgtggcaatcgtcgc
ggcaaaggcgcagcccgcgccagcgatgaagtgcgcagcaagcgcatggcgctgcgtcgc
cgctacaagattcaggatgtaatccatcgccgccaggttgttctggtgcaggtgatgaag
gaagagcgcggcaataaaggcgcggcgctcagcacctatctctcgctcgccggacgctat
tgcgtattgatgccgaacagcgcccatggcggcggtatcagccgcaaaatctccagcgcc
ggtgaccgcaagcgccttaaaggcattatcgccgaactcaacctgccgagcagcatgggc
tgtatcgttcggaccgcaggcctgtcgcgcaccaagaccgagatcaagcgtgactttgat
tatctcgcccgcctctgggacgggattcgtgagaacaccctcaaggcgtctgccccggca
caaattcacagcgatagcgacctgatcaaacgcgcgatccgcgatatctataatcgtgag
attgaagaggtgatggtcgagggcgatgacggctatcgcgccgccaaggactttatgaag
ctgctgatgcccagccatgcgcggcgggtgaagcattatgccgatccgatcccgctattc
cagcgctatggtgccgaggatcagctcaacgccatgtatgagccgatggtacagctcaaa
tccggcggctatctggtgatcaacccgaccgaggcactggtctcgatcgacatcaactcg
ggccgctcgacgcgtgaacacggtattgaggcgactgcggtcaacaccaatttggaagcc
gcgcgcgagattgcccgccagttgcgcctgcgcgatatggccgggctggtggtcatcgac
tttatcgacatggagcgcagcggcaatatccgcaaagtcgaaaaggcaatgcgcgatgcg
ctgaaatccgaccgcgcgcgcattcaggtgggccgcatatcgggcttcggcctgctggag
atgagccgacagcgcctgcgcaccggcgtgctggaagcctcaacccgtgtttgcccgcat
tgtgacggcaccggttttgtccgtaccgcatcatcctctggtcttgcggcactgcgcctg
ctcgaggaagaagcggccaaaggcaaaggctcgcaactggtcctacgcaccagccaggaa
gccagcatctatgtcctcaaccataagcgtgcaggcattggcgagatcgaagaacgctat
ggcgtaacaatcgaggtcttgcccacggatgatattgaaggcgcgaaaatgaccgttgag
gtcagcggtcccaagccaactgttaccgtagactatgccccgattatcgatccggtcgag
gaagaggaagaagagcagaccgtcgaaaaccgcgaggaagacgaggatcgacccaagcgc
aaacgtcgccgccgtcgtcgcggcaagcgtggcggtgaaaatcgcgataaacgcgatgat
cagcaagacgaagcttcaccggctgactcagacgctcctgcagaaaatgcggatgatgaa
ggcgaagtcaaagacgagaagccgaagcgcaaacgtcgcagccgtcgtcgtaagagtgat
gatgaagcagttaacgagggcgaagcgacagaacagtccgaagcggacactgctgaagat
agcgacgctgaggaaaagccaaagaaacgcacacgacgtcgcaaatccgaggctgcaaaa
gcagatgatactgatgacagtacatcagtagaagcccctgaggccgataccgaagagaag
cccaaacgtcgtaagcgcaaaaccgctgcggagaaaagggctgaagaagctggcgctgaa
aatgctgagccggacgctatcgaagcagacgataaacccaaggctagcaaaccgcgcaaa
gctcgcaccagcgcagccaagtctgccgatgctgaagaaaagccaagcacagcaaagaaa
ccgcgcaaggctgctgccaaggaaagtgctgatgaagcggcaccgcaggaagcggccaat
gaccgcaatggtgacagcgcagaaagtgccggtgacgaaaagcccaaaaagggctggtgg
cagcggacattcggtaactga
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