Alterisphingorhabdus coralli: RB602_07185
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Entry
RB602_07185 CDS
T10589
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB602_07185 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoa03019
]
RB602_07185 (pnp)
03016 Transfer RNA biogenesis [BR:
acoa03016
]
RB602_07185 (pnp)
Enzymes [BR:
acoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RB602_07185 (pnp)
Messenger RNA biogenesis [BR:
acoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RB602_07185 (pnp)
Transfer RNA biogenesis [BR:
acoa03016
]
Prokaryotic type
tRNA degradation factors
RB602_07185 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
CSD
DUF2152
Ycf1
DUF3016
Motif
Other DBs
NCBI-ProteinID:
WOE76489
UniProt:
A0AA97I189
LinkDB
All DBs
Position
1511010..1513301
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AA seq
763 aa
AA seq
DB search
MFDVKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAQSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINCICQVLSF
DGETEADIVAMIAASAALTISGVPFMGPIGAARVGFIDGEYVLNPKQETALEDGRLDLVV
AATQDAVMMVESEAKELTEDEMLGAVLFAHNEIKTVVGAIIDLAEQAAKEPWELDQVEDK
AARMDELRGLIGDDLAAAYKITDKQARQDAINVAREKAREHFEALKEEDPAEYLGVLKLV
KKLEASIVRGAILKDGQRIDGRKTNEVRPIDSMVGFLPRTHGSALFTRGETQAICTTTLG
TKDAEQMIDGLDGLTYSNFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPD
AEEFPYTIRILSDITESNGSSSMATICGGCLSMMDAGVPIERPVSGIAMGLILEGDEFAV
LSDILGDEDHLGDMDFKVAGTENGITTMQMDIKIAGITEEIFKTALNQAKEGRAHILGEM
TKALGASRTEMSQHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGLIKI
SSSDGAQIDAAKAWIEGIVEEAEVGKIYTGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNE
RVEKVSDELSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPRENKRGGRGPR
RDGDGGGRGRGRGRGRGRGGDNEGGDKDGSDAPLPDFIKGDED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtgaaaactgtatctctggaatggggcggaaaaaccctcactctggaaacg
ggccgtattgcccgtcaggccgatggtgccgtgctggcgacctatggcgaaaccgttgtt
ctgtgtgcagtaacggctgcacaatcggtcaaggaagggcaggacttcttcccgctgacc
gtccactatcaggaaaaattctctgctgccggccgtatccccggtggctttttcaagcgt
gagcgcggtgcgaccgagaaggaaacgctgaccagccggttgatcgaccgtccgatccgt
ccgctcttccctgaaggtttctacaacgaaatcaactgtatctgccaggtgctcagcttc
gacggtgagaccgaggccgatatcgtggcgatgatcgcagcgtctgcggcgctgaccatt
tccggtgtgccgtttatgggcccgatcggtgcagcgcgtgttggctttatcgatggcgaa
tatgtcctcaatccgaagcaggaaaccgctctggaagacggtcgtctcgatctggttgtt
gccgctacgcaagacgcggtgatgatggtcgagtccgaagccaaggaactgaccgaagac
gagatgctcggcgcggttctgtttgcgcataacgaaatcaagaccgttgtcggcgcgatc
atcgatctggctgaacaggctgccaaagagccttgggaactggatcaggttgaagataag
gccgctcgcatggacgagctgcgtggtctgatcggcgatgatctggctgcggcttacaag
atcaccgacaagcaggcgcgtcaggatgcgatcaacgtcgcgcgtgagaaagcgcgtgag
cattttgaagcgctgaaggaagaagacccggcggaatatctcggtgtcctcaagctggtg
aagaagctcgaagccagcatcgttcgcggcgctatcctgaaagacggtcagcgtattgat
ggtcgtaagaccaacgaagtgcgtccgattgattccatggtcggcttcctgccgcgtacc
catggttccgcgctgttcacccgtggcgagacgcaggcaatctgcaccacgactttgggc
accaaggatgccgagcagatgatcgacggtctcgatggtctcacctatagcaatttcatg
ctgcactataacttcccgccttactcggtcggtgaagtcggtcgcttcggcgcgccgggc
cgtcgtgagatcggtcatggcaagctggcatggcgggcgctgcatccggttctgcccgat
gctgaggaattcccgtacaccatccgcatcttgtcagacattaccgagtccaacggttcg
tcctcgatggcaaccatttgtggcggctgtctgtcgatgatggatgccggtgttccgatc
gagcgtccggtttccggcatcgccatgggtctgatccttgaaggcgatgaatttgcggtt
ctttccgatattctcggtgatgaagatcatctcggcgatatggacttcaaggtggccggt
accgaaaacggcatcaccaccatgcagatggatatcaagattgccggtatcaccgaggaa
atcttcaagaccgcgctcaaccaggccaaggaaggccgggcgcacattctgggtgagatg
accaaagctcttggcgcctcgcgcaccgaaatgtcgcagcacgcaccgcgtatcgaaacg
atgcagatcgacaaatcgaagatccgcgacgttatcggcaccggcggcaaggtgatccgc
gagatcgtcgccgaaaccggcgccaaggtcgatatcgacgatgaaggtctgatcaagatt
tcctcgtccgacggcgcacagatcgatgctgccaaggcatggattgaaggcattgtcgag
gaagccgaagtcggcaaaatctacaccggcaaggtcgtcaatctggttgatttcggcgcg
ttcgtgaacttcatgggcggcaaggacgggctggtgcacgtttccgaaatcaagaatgag
cgtgtcgagaaggtctctgacgagctgtccgaggggcaggaagtcaaggtcaaggttctc
gagatcgaccagcgcggcaaggtccgcctgtcgatgcgcgttgttgatcaggaaaccggt
gaagagctggaagacacccgcccgccccgcgaaaacaagcgcggtggtcgtggcccacgt
cgcgacggtgacggcggtggtcgcggacgtggccgaggccgtggacgtggtcgcggcggt
gataatgaaggcggtgacaaggacggcagcgatgcgccgctgcccgacttcatcaagggt
gatgaggactga
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