Alterisphingorhabdus coralli: RB602_07450
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Entry
RB602_07450 CDS
T10589
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa02024
Quorum sensing
acoa03060
Protein export
acoa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RB602_07450 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RB602_07450 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB602_07450 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
acoa02044
]
RB602_07450 (ffh)
Enzymes [BR:
acoa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RB602_07450 (ffh)
Secretion system [BR:
acoa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RB602_07450 (ffh)
Eukaryotic Sec-SRP protein
RB602_07450 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_30
Zeta_toxin
AAA_19
AAA_16
AAA_33
DnaB_C
ABC_tran
AAA
AAA_31
AAA_28
cobW
APS_kinase
AAA_17
AAA_5
AAA_14
Thymidylate_kin
6PF2K
TctA
AAA_24
KTI12
ResIII
NACHT
NPHP3_N
AAA_18
YqeC
Motif
Other DBs
NCBI-ProteinID:
WOE76541
UniProt:
A0AA97F9C5
LinkDB
All DBs
Position
1572533..1573984
Genome browser
AA seq
483 aa
AA seq
DB search
MFDSLSDRLGGIFDRLKGRGALNEDDVRAAMREVRIALLEADVALPVVRGFIDKVTDKAI
GQEVLKSVTPGQQVIKIVNDALVEMLGSDVSEIDLATTPPAIIMMVGLQGSGKTTTTAKI
AKMLTEKERKKVMMASLDVNRPAAQEQLATLGEQTSVATLPIIAGQQPVEIAKRAIQAAK
LQAFDVLLLDTAGRLHVDQQLMDEMRAVSAEAQPKETLLVVDSLTGQDAVNVAQNFSEQV
DLTGVVLTRMDGDARGGAALSMRAVTGRPIKFVGTGEKMDALELFHPDRVANRILGMGDV
VSLVERAAETVKAEDAEKLAERMSKGQFDMNDLRTQLQQMTKMGGLGVLAGMMPGMKKAK
AAMEASGMDDKVLVHMDAIIGSMTIEERAKPALLNAKRKRRVAMGSGTTVQDVNKLIKMH
KEMAGAMKKIRKMGGLKGLAAMFGGGGADPADLLGGPGGPGAGQLPPGLPGLPGGMPPGP
FKK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagcttatcagatcgccttggcggcatatttgatcgccttaaaggccgtggt
gcgcttaatgaggacgatgtccgcgcagcgatgcgcgaggtgcggattgcgctgctcgaa
gccgatgttgcgctgccggtagtccgcggctttatcgacaaagtgaccgacaaggcgatc
ggtcaggaagtgctgaaatcggtcacgccaggccagcaggtgatcaagatcgtcaatgac
gcgctggtcgagatgctgggcagcgatgtcagcgagattgatctggcgaccacgccaccc
gccatcatcatgatggtcggcctgcagggttcgggtaaaaccaccaccaccgccaaaatc
gccaagatgctgaccgagaaggaacgtaaaaaggtgatgatggcgtcactcgacgtcaat
cgcccggcagcgcaggagcagttggcgacattgggtgaacagacgtcggtcgcgacgtta
ccgatcattgccgggcagcagccggtggaaatcgccaagcgcgctattcaggcggcgaag
ctgcaagcctttgacgtgctgctgctcgataccgcaggccgtctgcatgtcgatcagcag
ttgatggacgagatgcgcgccgtctccgccgaggcgcaaccgaaagagaccctgctggtg
gtggactcgctgaccggtcaggatgcggtcaatgtggcgcagaatttctccgagcaggtt
gatctcaccggcgttgtgctcacccgtatggatggtgatgcccgtggcggtgcggcgctt
tcgatgcgtgcggtcaccggtcgtccgatcaaatttgtcggcactggcgagaagatggac
gcgctcgagctgttccatcctgatcgtgtcgccaatcgtattctcggtatgggcgatgtc
gtcagcctggttgagcgcgcggcggaaacggtcaaggccgaagatgccgagaagcttgcc
gagcgcatgtccaaggggcagttcgatatgaacgatctgcgcacccagttgcagcagatg
accaagatgggcggtctcggcgtgctggcgggcatgatgcccggcatgaaaaaggccaag
gcggcgatggaagccagcggcatggacgacaaggtgctggtccatatggatgcgatcatc
ggctcgatgaccatagaggaacgcgccaaaccggctctgctcaacgccaagcgcaagcgt
cgcgtcgccatgggctcgggcaccacggtgcaggacgtcaacaaactcatcaaaatgcac
aaggaaatggccggagcgatgaagaagatccgcaaaatgggcgggcttaaaggtctggcc
gcgatgtttggtggtggcggtgctgatcctgcggatttactcggcgggccgggcggtccg
ggtgcggggcaattgccaccgggcctgcccggattaccgggcggcatgccgccggggccg
ttcaagaaatag
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