Alterisphingorhabdus coralli: RB602_09660
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Entry
RB602_09660 CDS
T10589
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acoa Alterisphingorhabdus coralli
Brite
Enzymes [BR:
acoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB602_09660 (addB)
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RB602_09660 (addB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOE74122
UniProt:
A0AA97F6E9
LinkDB
All DBs
Position
complement(2082900..2085908)
Genome browser
AA seq
1002 aa
AA seq
DB search
MADRAQPSIYTILPHRGFADALATGLVNRYKNRADGLASVTLLLPNQRARRSMMDAFVRQ
SDSGLLLPKMVAIGDMELGESVGAALDPVGQDDIPAAMDPLHRQFVLAGLIRDYQGREKR
EISLAESFRLARQFAVMLDQLAVEEHDFAALSVMAEDQRAELATHWQVTLDLVNHVAQQW
QDYLTQLQRLDAASRRNLLFAQAAESIRNRTSGDIIAAGIATPAPAVARLLRAVAFADGG
SVILPGLDLNLDEDIWQDLMPPKSDDDALDDNEAAHQINHPQYHMRLLLERMSIRRDEVR
NWHRSGEAASAPVISRTISNIFLPARHSGRWRDLESAERRLPNVRLIECDTIGEEAQTIA
LLVRQALETPEKRVAVVTPDRVLARRVAKHLARWDIVADDSAGRPLGETPPGSLFLSIAE
CLASSFSPVALLDMLKHPLVTGEDLRGEWLTKVRALDLALRGPRNGLGLEAITRQINRHF
ADRGQQDSKKGETVAALWEQLQSSDLAPLSALSTASDYPLTLLLAAARDCADRLTQSAIW
QGQAGRALADALSALEGEAEQASLTCAADDMPLLLRGFFSESAIRPGYGQHPRVAILGLL
EARLQRADLMICAGLNAGKWPQQTQPDPFIPPVLRRKLNMPTAEYSNGLSAHDLAAALGA
PECVLTRSARDGEGITIASPFLRRLQAMLGDRLQRDTETLAIARNLDRQLPPVRIGTPAP
APSAERRQVTLAATDLDRLRGAPFAFYAGKILRLRSIDAPDARPTAAWRGIAVHAILEDW
VKLDNSDPALLSKRLDRFWQEQIDFPILRAVWRPRIDAAMQWIADETERLRAEGRTVLAA
EATGRIDYHDITLKGTADRIDRTADNGLIIIDYKTGQPPTARQVETGYAMQLGVLSLIAE
CGGFEGITGRIESVEYWSLARNKADGFGYRDQPLKVGKKRSGLAPDEFMPEMVRYIDDAL
DRWIFGDEPFTAEVNPDYPGFNDYDDLSRLDEWYSRGRESSA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgcgcgcagccatcaatctacaccatattgccgcatcgcggctttgctgat
gccctcgcgaccggtctggtcaaccgctataaaaaccgcgccgatggtctggcttcggtc
acattattgcttcctaatcagcgtgcccgccgttccatgatggacgcctttgttaggcag
tccgatagcgggctgttgctgcccaaaatggtcgcgattggcgatatggaacttggagaa
tcggtcggcgctgcgctcgatccggtagggcaggacgatattcccgccgccatggacccg
ctgcatcggcaatttgtgttggcgggcctgatccgcgactatcaggggcgagaaaagcga
gagatcagtctcgccgagagttttcgtctggcacggcaatttgccgtcatgctcgaccag
cttgcggtggaagagcatgattttgcagcactgtcggtcatggccgaggatcagcgtgca
gagctggcgacgcactggcaggtgacgcttgatctggtgaaccatgttgcgcagcaatgg
caggattatctgacacagcttcaaaggctggatgcggcttcccgacgcaatctgttattc
gcacaggcggctgaatccatccgcaatcgcacatcgggagatattatcgccgctggtatt
gcgacacctgcacctgcggtggcgcggctgttgcgcgcggtggcctttgcggatggtggc
agtgttattctaccggggctcgacctcaatctggatgaggatatctggcaagacctcatg
ccgcctaagtcagatgatgacgctttggatgacaatgaggcggcacatcagatcaatcac
ccgcaatatcatatgcggctgctgctcgagcggatgagcattcgccgagatgaggtgcgc
aactggcatcgatcgggcgaagcagcctctgcgcccgtcataagtaggacgatcagcaat
atcttcctgcccgcccggcacagtggacgctggcgcgatctggagagtgccgagcggcga
ctgcccaatgttcggctgatcgaatgcgataccattggtgaagaagcccagacgattgcg
ctactggtgcggcaggcattagagacgcccgaaaagcgtgtagcagtggtgacacccgac
cgggtattggcgcgccgcgttgccaagcatctggcgcgctgggatattgttgccgatgac
agtgctggtcgcccgctgggtgaaacacctccgggcagcctgtttctctctatcgccgaa
tgtctggcaagcagcttttcgccggttgccttgctcgatatgctgaaacatccgctggtg
accggcgaggacttgcgcggagaatggctgaccaaggtccgggcgctagacttggcttta
cgcggcccgagaaatggccttgggcttgaagcaattacccgtcagatcaatcgacacttt
gctgatcgcggccagcaggacagcaagaagggagagactgttgccgcgttgtgggagcag
cttcagtcgagtgatctcgcaccactgtcagccctttcgaccgcaagtgattatccacta
accctattgcttgccgctgcgcgcgactgtgcggatcgattaacacaatcggctatctgg
caggggcaggcgggcagggcgctggcggatgcgctttccgcacttgagggcgaggctgag
caggcttctctgacctgtgcagcagatgatatgccgttgctgctgcgcggcttcttcagc
gaaagcgctatccgtccgggctatggccagcatccgcgcgtggcgatattgggcttgctc
gaagcgcgattgcagcgggccgatctgatgatctgcgccggtttgaatgcaggcaaatgg
ccgcagcaaacacaacccgatccgttcatcccgccggtgctgcgccgcaaactgaatatg
ccgactgcagagtacagtaacggcctcagcgcgcatgatctggcagccgctttgggcgca
ccggaatgtgtgctgacccgctcggcgcgcgacggtgagggtatcactattgcatccccg
tttttgcgacgtttgcaggcgatgctgggggatcggctacagcgggatacagagacgctg
gccatagcgcgcaatcttgatcgacaattgccgccggtcaggattggcacaccggccccg
gctccctccgcagagcggcgacaggtgacactggccgccaccgatcttgaccggctgcgt
ggcgcgcccttcgccttttatgctggcaagattttgcgactgcgctcgatagatgcgcct
gatgccagaccgacggcggcatggcgcggcattgcggtgcatgcgatattggaagactgg
gtcaagctggacaatagtgatcccgcgctgctgtcgaagcgtcttgatcgcttctggcaa
gaacagatcgatttcccgatcctgcgcgcggtctggcgtccgcgtatcgatgcggcgatg
caatggattgctgatgaaaccgagcgactgcgtgctgaaggccgtaccgttctcgctgcc
gaagcaaccggccggatcgattatcatgatattacgctcaaaggtacggcggatcgtatc
gatcgcactgccgataacggcctcatcatcatcgactacaagaccggccagccgcccaca
gcgcggcaggtggagaccggctatgccatgcaattgggcgtgctgtcactgatcgctgaa
tgcggcggttttgagggaataacgggacggattgaaagcgtcgaatattggtcattggcg
cgtaacaaggctgatggatttggctatcgcgaccagccattgaaagtgggcaagaaacgc
tccgggctggcaccggacgagtttatgcccgaaatggtccgctatatcgatgacgcgctc
gatcgctggattttcggtgatgagcctttcactgctgaagtgaatcccgactatccgggc
tttaatgactatgatgatctcagtcgtcttgatgaatggtatagcagagggcgggagagc
agcgcgtga
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