Alterisphingorhabdus coralli: RB602_09900
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Entry
RB602_09900 CDS
T10589
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RB602_09900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_09900
Enzymes [BR:
acoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB602_09900
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RB602_09900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Flavi_DEAD
Zn_ribbon_6
AAA_22
Ligase_CoA
SLFN-g3_helicase
PIF1
AAA_16
Zn_ribbon_12
Zot
Motif
Other DBs
NCBI-ProteinID:
WOE74167
UniProt:
A0AA97F6H9
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All DBs
Position
2129592..2131808
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AA seq
738 aa
AA seq
DB search
MASTAPSMQKPGQTTGRKQRVRVVLLTAVIGPLDYAVPQGMTLTPGDIVTVPLGPRQLTG
VVWEDERAETEDVEDSKLRPVIAKAGLPPLSDEMRRLAEWASDYYLASLPNVLRMAIPGS
AALKEAREITEYSLKDEQPDRMTDARKQAYERLEGRQGTVRELAAAAEVSEGVIRGLVNG
GFADTHLVPTDAPFDPPDPDADQVDLSDTQQDVANQLVDAIKEKSFAPILLDGVTGSGKT
EVYFEAVAEAIRQGRQCLVLLPEIALTQPFLERFAKRFGTRPVAWHSGLRQSERRRAWQA
IANGSAHVIVGARSSLFLPYQNLGLIIVDEAHETSFKQEDGVRYNARDVAVMRAHMERFP
VILASATPAIESHHMAEIGQYQRLSLPARFGGAIMPDITPVNLIETPPERNHWIAPPLVE
ALEETLERGEQSLLFLNRRGYAPLTLCRNCGHRIECPNCSAWMVEHRLTHRLACHHCGHV
MPMLDSCPECGAEDSLVACGPGVERIADEVAARLPDARSIVVTSDTIWSPAKAEEFVQQV
TNNMVDIIIGTQLVTKGYHFPNLTLVGVIDADIGLEGGDLRAAERSFQQISQVAGRAGRA
EKPGRVLVQTRNPEAPVIAALIAGDRDAFYAAELASREMAMMPPFGRLGALIISSEDQAE
ANEAARMIGHSAPDFDGFTVYGPAPAPLSMLRGRYRFRLLVHARRTVPMQKAIRDWLDPI
KLPQGVRVALDVDPYSFV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccgctccctcaatgcaaaaacccggccagaccacaggccgcaaacagcgc
gtgcgcgtggtccttttgaccgcggtgatcggcccactcgactatgcggtgccacagggc
atgacgctgaccccgggggatattgtcacagtgccgctggggccgcgccaattgaccggt
gtggtgtgggaagatgagcgcgccgaaaccgaggacgtagaggacagcaagctgcgcccg
gttatcgccaaggccggtctgccgccgctttccgatgaaatgcgacgcctcgctgaatgg
gccagcgactattatctcgcttcgctacccaatgtgctgcgcatggccatcccgggttcg
gcagcgctgaaagaggcgcgcgagattaccgaatatagcctgaaagacgagcagcccgac
cgcatgaccgatgcgcgcaaacaggcctatgaacggctggaaggacggcaaggcacagtg
cgcgaactggcggcggcggcagaggtctccgaaggggtgatccgcggtctggtgaatggc
ggttttgccgacacgcatctcgtgccgaccgatgcaccatttgatccgcccgaccctgat
gccgatcaggttgatctttccgatacacagcaggacgttgccaatcagctcgttgatgcc
atcaaagagaaaagctttgccccgatcttgctcgatggtgtcacgggctcgggcaaaacc
gaggtctattttgaagcagtggccgaagccatacggcaaggcaggcaatgtctggtgctg
ttgcccgagatcgccctcacccagcctttcctcgaacgcttcgcaaaacgctttggtaca
cgcccggtcgcatggcattccggcctgcgccaatcggagcgccgccgtgcctggcaggcg
attgccaatggcagtgcgcatgtcattgttggcgcacgttcttcactgtttctgccctat
caaaatctcggcctgatcatcgttgatgaagcgcatgaaaccagtttcaaacaggaggac
ggggtgcgctacaatgcccgtgatgtcgcggtaatgcgcgcacatatggaacgctttccg
gtcattctcgccagcgccaccccggcgattgagagccaccatatggccgaaatcggtcaa
tatcagcgactgtcactgcccgcgcgttttggcggggcgatcatgcccgatatcacgccg
gtcaacctcatcgaaaccccgcccgaacgtaaccattggatcgcgccacctctggttgaa
gcgctcgaagaaacgctggagcgcggcgagcaatcgctgctgttcctcaaccggcgtggc
tatgcaccgctgaccctgtgccgcaattgtggtcatcgtatcgaatgccccaattgcagc
gcctggatggtcgaacacaggctgacgcaccgcctcgcctgccatcattgcggccatgtg
atgccgatgctcgatagctgccccgaatgcggcgcggaggacagcctcgtcgcgtgcggc
cccggcgtcgagcgtatcgccgatgaggtggcggcgcgattgcccgatgcgcgcagcatt
gtggtgacgtcggatactatatggtcgcccgccaaggccgaggaatttgtccagcaggtc
accaacaatatggtcgatatcatcatcggcacccagctggtgaccaagggctatcacttc
cccaacctcacactggtgggcgtgattgatgccgacattggtttggaaggcggtgatttg
cgggcagccgaacgcagcttccaacagatatcgcaggtcgccggacgcgccggacgagcg
gagaagccaggccgcgtattggtacagacccgcaacccggaagcaccggtgatcgccgcg
ctgatcgccggcgaccgcgatgccttttatgcggccgaactggcctcgcgcgaaatggcg
atgatgccgccctttggccgtttgggcgcgctgattatctcatccgaggaccaggccgaa
gccaatgaagctgcgcggatgatcggccatagcgcgcccgattttgatggattcaccgtc
tatggccccgcccctgccccactttccatgctgcgcgggcgctatcgtttccggctgctg
gttcatgcccgccgcacggtgccgatgcagaaggctatccgcgactggctcgatcccatc
aaactgccacaaggcgtgcgggtcgcgctggatgttgatccctatagctttgtttaa
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