Alterisphingorhabdus coralli: RB602_13175
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Entry
RB602_13175 CDS
T10589
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
acoa Alterisphingorhabdus coralli
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoa02000
]
RB602_13175
Transporters [BR:
acoa02000
]
Other transporters
Pores ion channels [TC:
1
]
RB602_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
Motif
Other DBs
NCBI-ProteinID:
WOE74782
UniProt:
A0AA97F7N9
LinkDB
All DBs
Position
complement(2820395..2827957)
Genome browser
AA seq
2520 aa
AA seq
DB search
MRVRLLSSTILSACALATASAVLLTPEPAQAEDCLLDRNDNGIADPGDNDGGANSNGDND
SLACGVGADATGNNATAIGASATATGNNATALGNGATADSNGATALGSNADALAEGALAM
GRNSLAEGENALAIGPQSTASRENAIAIGDASRAEAVDTVAIGNASVASGNRSVAIGDDA
DAIGTAAIALGREADAGGIASLSVGDRSEATENRAIAIGGDGGDDGNVGAQALAAEAIAI
GTDTAANADEAIAFGSNATANGLASVALGAGSFADRDNTVSVGSAGSERQIVNVAAGTQD
TDAVNLAQLNAATASAAYLDVNSTGTLPTASGLDAIALGVGASAINLESIAIGQEANTMG
AFGIALGRSATTVGSNAISLGTRASAQTDGTVAVGADSLATGFAAVALGQQSGATNSGSI
AIGGDLSDGNTLGAQASGAETIAIGGDAVASNPEAISLGAGAIASGQESLAIGDSAVASN
TLSIAVGDQANSSGVSAVAIGHDAVARADGGLAIGDNAAADAINATAIGVRATAADSRAT
AIGNDSLASGPSSAAFGRRANAGGEASLAMGFDARAAGGDSISIGSASSSAGLEGIALGR
SANASGVFAVAVGTGSQASGLSAQAFGSGAQAPGANSLAFGTGSFATGINASAMGNNAFA
NADNASALGTNAFADANNAIAIGNNSIATDEGNVAIGGDSSGLDGLGAQATGGLATAIGA
DAVASATGAVAVGQLAVATLTGATSVGTEASATGASSVAFGTLAVASGGDTVAIGGIAQA
TGRQAVAVGRASDATADGAIAIGGDGEDSGTDGAQALGVSAIAIGRDATSSGSNSIALGR
LSTSDGTGAMAIGSGTVATSFGALAVGNSADAMGFQATAIGSSAIAEADNATAVGDDANA
QGSNSTALGSQALAVADNSVALGGDAEANASLSVALGRASIADRANTVSVGSAGSERQIV
NVAAGTEDTDAVNLAQLNAATTDDDYLDVNSTARQPIASGLNAIALGPQAEASGAQSQAF
GFGAIAEANFATAIGPNARSTASGAIAIGQLSEATGPGGIAIGPGSIASGTTATAIGTGA
NAAGVEATALGDGASAEADEAIAIGKRSIAQAENSASFGSNALAAAENSLAFGADTAANA
VGSVALGANAIADRENTISVGAAGSERQIVNVAAGTEDTDAVNLAQLNAATADDDYLDVN
STGAQPSATGDDAIALGEDAQAIGAQSLAVGTLSSAAGEAAIASGFGSSASGNSAIAVGI
DALANASDAIALGSLTQATGLNAIAIGDGAQASELNAVAIAELSRASALNAVAIGVEANA
SDTNAVAIAVGSQASASNSVAISSGANASASNAVAIATSANASASNALAIGVSSNAGGRD
SVALGIQANSSGASALSLGAESIAGADSAVAIGRLTSATAENAIALGANAQANLVNSVAL
GAASVADRANTVSVGSAGSERQIVNLAAGTEDTDAVNLAQLNSAISGVSAGADSDYIVAN
STGAQPVALGEDAVAIGELSQANAINSVALGANAVADRANTVSVGAVGSERQIANVASGT
QGTDAVNLTQLDGVQAIADAAQLDATQALSDAAAAQTSANTAQGDADQALINAASAQGDA
TQALADAATAQTTADGAQSDATQALSDASDAQASANAAQSDATQALADAADAQADADSNA
AELAFFAANGTGAASVTGANSVAIGAGSIADQDNTVSVGAAGNERRIVNVAGGTDDNDAA
TIGQLNTAIANVSTGGNAFIAINSTGLAASAVGADAVAIGRASDASADNSVALGNGSVAN
RINSLSVGAVGSERQITNVAAGTQGTDAVNLAQLDGVQMIADAAQLDATQALADASDAQM
SADAAQSDATLALDNAADARLVADAAQSDANQALVDAADAQSAAQDAQTDADANAVQLAY
FDVNSTETGALASGDGSIAIGPNALVGAGGTNSIAFGNGANVGMGVVNSVALGAGSVADR
ANSLSIGSPGNERQIVNVASGVQDSDAANVAQLKAVQGSASAAQAAADAAQSDASQALSD
AANAQTSADDALAHNLVQDGLIAGNSAAAASAQNDASQALSDAAAAQSTAYSAITNAASA
QSTADNALADANTALAQNQAQDDLIANNAAAAANAQGDATQALADAAAAQARADDAFANA
ATAQQTADQARDEARDAMMTATQAGADSAEALQQADAAFERAVEAQADADTARSEAMQAQ
LDADAALALAETNSEELEYLAVNSTGAGASAAGMDAVALGGESNAAGDRSVAIGYQAMAQ
DGQAVSIGYSNMASGDGAVAIGNPNTATGTGAVALGATNSANGTGAVAIGNLNVANGNGA
VALGNGAMATADGAVAIGTGAVADRPNLIALGSEVSTYRAAGITSDASNAAQQGAVSLVT
TDAMGNLGTSSLSLASLGQLDGRVATLEGQMVAAFDLANTVDRDAQRGIAAIAAQANPHF
PSEVGKTSYASNFAVYRGEVGFSLGLMHRLDSETPFAVTAGVSYAGGNSTAVRAGIAGEF
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtccgtcttctcagctctacgattctttctgcctgtgctctggccacagcatcc
gctgtgctgctcacaccagagcctgcacaggcggaggactgtttgcttgatcgcaatgac
aatggcatcgcagacccgggcgacaatgatggcggcgccaattcgaacggtgacaacgac
tccttggcttgcggcgtcggggccgatgcaaccggaaataatgcaaccgctataggggct
tctgccaccgcaacgggaaacaatgcaacagctcttggtaatggtgcgacagcagacagc
aatggcgcaaccgctctgggttccaatgcagacgcgctggcagaaggcgctctcgctatg
gggcgcaactcgttggctgagggtgagaacgcgttggcaattggcccgcaatcaacggcg
agccgagaaaatgcgatcgccatcggcgatgcctccagagcagaagctgttgacacagtt
gccattggtaatgcctctgttgcgtctgggaaccgaagcgttgccataggtgatgatgcg
gatgccattggaaccgccgccatcgcactgggccgagaggctgatgcgggcggcattgct
tcactcagtgttggtgatcgctccgaggcaaccgagaacagggcgattgctattggcggt
gatggtggtgacgacggcaatgttggcgctcaggcgctggcggccgaggccatcgcgatt
ggtacggacaccgccgccaatgccgatgaagccatcgccttcgggtcgaatgctaccgca
aatggtctcgcatcggtcgcgctcggcgcgggctccttcgctgaccgcgacaacacggtc
tctgtgggctctgccggaagtgagcgccagatcgtcaatgtcgcagcgggaacccaggac
acagacgcggtcaatctcgcccagctcaacgccgcaaccgcaagtgccgcctatctcgac
gttaattccaccgggacgctgccgacggccagcggattggatgcgattgcgctcggtgtt
ggagcatctgcgataaacctggaaagcatcgccatcggccaagaggccaacacaatggga
gcgtttggcatcgcattgggacggtcggccactactgttggatcaaacgccattagcttg
ggcaccagagcgagcgcacaaaccgacggaactgttgcagtgggcgcggattccttggct
accggcttcgccgcagttgccctggggcagcaaagcggtgcgaccaattccggttctatc
gcaataggcggcgatctttcagatggtaatactctgggcgcgcaggcttctggtgccgag
acgattgcgattggcggcgatgctgtcgcttccaatcccgaagcgatcagcctgggcgcg
ggcgcaatcgccagtgggcaagaatcgctggcaatcggcgatagcgcagttgccagcaat
accctttcgattgctgtgggagaccaggccaacagttctggcgtttcggcggtggcgatt
ggccacgacgccgtcgcgcgcgctgatggcggccttgcgatcggtgataacgctgctgcc
gatgcgatcaacgcaacggccataggcgtccgcgcgaccgcagccgatagtcgcgcaacc
gctatcggcaacgattccttggcgagtgggccttcatcagcagcctttggtcggcgggcc
aatgccgggggcgaggcatcgcttgccatgggcttcgatgcaagagcggcaggcggcgat
tccatcagcattggatccgcttcgtcgtccgctggcttagaaggtatcgcgcttggccgg
agtgccaatgcgagcggagtattcgccgttgcggtcgggaccggctctcaagccagcggc
ctctccgctcaggcctttggctcgggcgcccaagctcctggtgccaattcactggcgttc
ggcacagggtctttcgccactgggatcaatgcaagcgcgatgggcaacaatgcctttgcc
aacgcggacaatgcgagcgctctgggcaccaacgcctttgccgatgccaacaatgccatc
gccatcggcaataacagcatcgctacagatgaaggtaacgtcgccatcggcggcgacagc
tctggtctcgacggtctgggcgctcaggcaacgggcgggttggcgaccgccatcggggct
gatgctgttgccagcgccaccggagctgtggctgtcggccaattggccgtggcaactttg
acgggtgcgaccagtgtcggcacagaagcgagtgcgaccggcgcatcaagtgtcgctttc
ggcacccttgcggtagcaagtggaggcgatacagttgccattggcggcatcgcgcaagct
acagggcgacaggcagtggccgtaggtcgcgcgtccgacgccaccgcggatggcgccatt
gctattggcggtgatggcgaagacagcggaacagatggcgcgcaggcgcttggagtaagt
gccatcgccatcggccgtgatgcaacaagcagtggctcaaactccatcgcactggggcgt
ctcagcacatcggatgggactggcgctatggccatcgggtctggaaccgttgctaccagc
tttggagctcttgctgttggcaacagcgctgatgcaatgggcttccaggcaactgctatc
ggcagctcggccatcgccgaagcagacaatgcaacggctgttggtgatgatgccaatgcg
cagggcagtaattcgactgcgctcggctctcaagcgctggctgtggcggataactctgtg
gcgcttggtggagatgcggaggcaaatgcttcattatcggtcgcactggggagggcctca
atcgcagaccgggcgaacacggtctcagtcggctctgcaggtagcgagcggcagatcgtc
aatgtcgccgccggcaccgaagataccgatgcggtcaatctcgcccagctcaacgctgct
accacagatgacgactatctcgacgttaattctaccgcgaggcagcccatagccagtggt
ctcaatgcgattgcgctgggtccgcaggccgaggcaagcggagcgcagtcgcaagctttt
ggtttcggggcgatcgccgaagcgaatttcgccactgctatcggtccgaatgcgcgaagc
accgcttccggggcgattgcaattggccaattaagtgaagcaactggacctggcggtatt
gctatcgggccaggaagcatcgcttcaggaaccactgcaactgctatcggcactggcgct
aacgcggcgggagtcgaagcaactgcccttggggatggtgcatctgccgaagcagacgag
gctatcgcaatcggcaaaaggtctatcgctcaagcagagaattcggccagtttcggctcc
aatgccctggctgcggcggagaactctttggcgtttggcgcagatacagctgccaatgcc
gtgggatcagtcgcactcggtgcaaatgccatagctgaccgcgagaacacaatctctgtc
ggcgccgcaggcagcgagcgccagatcgtcaatgttgccgcgggaaccgaagacaccgac
gcggtaaatcttgcccagctcaacgctgcgaccgccgatgacgactatctcgatgtcaat
tccaccggggcgcagcccagcgcaaccggcgatgatgccatcgcgctgggcgaggatgca
caggcgatcggtgctcagtcattggctgttggaacgctgtcgtcggctgctggcgaagcc
gcaatcgctagtggctttggctccagcgcgagcggcaactctgccatcgcggttggcatc
gatgcattggcaaacgcgtccgacgctatcgccctgggatcattgacccaagcgacgggg
ctgaatgcgattgccattggtgatggggcgcaagcgtcagagctaaatgccgtggccatc
gcggaattatcgcgggcaagcgcgctaaacgcggtcgccattggggttgaggcgaatgca
agcgataccaatgccgtagcaattgcggttggatcgcaggcaagcgcctcaaattcggtg
gcaatttcgtctggtgctaatgctagcgctagcaatgccgtagcgattgcgacgtccgcg
aatgcaagcgctagcaatgccttggcaattggggtctcgtcgaatgcaggtggtcgcgac
tcggtcgctcttggcattcaagctaatagctcaggcgccagcgcgctgagtttgggtgcg
gaaagcatagctggagcggatagcgctgtggccatcggtcgattgaccagcgctacggct
gaaaatgccattgccttgggcgcaaatgcgcaagccaatttggtcaattcggttgccctg
ggcgctgcttcggtggctgaccgcgccaacaccgtttccgttggcagcgccggaagcgag
cgtcagattgtcaatctggcagccggcacagaggatacagatgccgtcaaccttgcccag
ctcaacagcgcgatctcgggcgtttcggctggagcggatagcgactatatcgtggccaac
tcgacgggcgcacagcctgtggcattgggcgaggatgcggtggcgattggcgagctgtca
caggccaatgccatcaattctgttgctcttggcgccaacgctgtcgcagatcgggccaac
accgtctcggtcggggctgtcggcagcgagcggcaaattgccaatgttgcttccggtaca
cagggcaccgatgcagtcaatctgacccagcttgacggtgtgcaggccatcgccgatgcc
gcgcagctggacgcgacacaggcgttgagcgatgcggccgccgcgcaaaccagcgcgaac
actgcccaaggcgatgccgatcaggccctaattaatgcagcaagcgcgcagggagatgca
acccaggctctcgcagatgcggcaacagcgcaaaccactgcggacggcgcccaaagcgac
gcgacacaggcgctctccgatgcttctgatgcacaagccagcgccaatgcagcgcagtcc
gatgcaacacaggctttggcggatgcggccgatgctcaggcagatgcggatagcaatgcg
gctgagctggctttcttcgccgccaatggcacaggcgcggcgagcgtaaccggcgcaaac
tctgttgccatcggcgccggttccatagccgatcaggacaatacggtctccgtcggcgca
gcgggcaatgaacgccggatcgtcaacgtcgcaggcggcacggatgataatgacgcggcc
actatcggacagttgaatactgcgattgccaatgtctcgaccggcggcaatgcctttatc
gcgattaacagcaccggccttgccgccagtgcagttggtgcagatgctgtagccattggg
cgcgctagcgatgcctccgccgacaactccgtggctctgggcaatggctcggtagccaat
cgcataaacagcctctcggttggcgcagtcggcagcgagcggcagatcactaatgttgcg
gcaggcacacagggcacggatgccgttaatcttgctcagctggatggcgtgcaaatgatt
gccgacgccgcgcagctggatgcgacacaggcattggccgatgcctcggatgcgcaaatg
agcgcagatgcagcccagtcggacgcgactctggccttggacaatgcggctgacgcacga
ctggtggcagatgcggcgcaaagcgatgccaatcaggcgctggtcgatgcggcggatgcg
cagagcgcggcccaagatgcgcagaccgatgccgatgcaaatgccgttcagctcgcctat
tttgatgtaaactcgaccgagaccggcgcgctggcgtccggagatggcagcattgcgata
ggaccaaatgctctggtcggcgctggcggtacaaacagtatcgcttttggcaatggcgcg
aatgtcggcatgggtgtcgtcaattcggtcgcgctgggggcgggttctgtggctgatcgt
gccaatagtctttcgattgggtcaccgggcaatgaacgacagattgtcaatgtggcctcc
ggggtgcaagatagcgacgcggccaatgtggcacagcttaaggcggtgcagggctcggcc
agcgcagctcaggctgctgccgatgcggcacaaagcgatgcgagccaggcgttgtccgat
gcggcgaatgctcaaaccagtgctgacgacgccttggcacataatctcgtgcaggatggc
ctcattgctggcaacagcgcggccgccgcaagcgcgcaaaatgatgccagtcaggcgctg
tccgatgcagcggctgcgcaatcgaccgcgtatagtgcgatcaccaatgcggcctctgcg
caatctactgccgataatgcgctggcggacgcgaatacggcgctggcgcaaaatcaggct
caagacgaccttatcgccaacaatgccgctgccgctgccaatgcgcaaggcgatgcgacc
caggcgctggcggacgccgctgcagcgcaggcgcgggccgatgatgcctttgccaatgct
gccaccgcgcagcagacagccgatcaggcgcgcgatgaagcacgggatgcaatgatgacg
gcaacccaggctggcgcggactctgctgaagcattgcaacaggctgacgccgcctttgag
cgtgctgtcgaagcgcaggccgatgccgatacggcacgcagtgaagccatgcaggcacaa
ctggacgcggatgcagcgctggcactggcagagaccaatagcgaagaactggagtatctc
gcggtcaactccaccggcgccggagccagcgccgccggcatggatgcggtcgcactggga
ggcgagagcaatgcagcaggcgatcgttccgtggcaatcggctatcaggccatggcacag
gacggccaggccgtctcaatcggctatagcaatatggccagcggtgatggtgctgttgct
atcggcaatcccaataccgcaaccggcactggagccgttgctctgggcgccaccaacagc
gccaacggcacgggtgcggtggcgatcggcaaccttaatgtcgccaacggcaatggcgct
gttgctttaggcaatggtgccatggcgacagccgatggtgcggttgccattggtaccggt
gctgttgcggatcggcccaacctgattgccttaggttcagaggtctccacctatcgcgcg
gcgggcatcacgtctgatgccagcaacgcggcgcaacaaggcgctgtcagcctggtcacc
accgatgccatgggcaatttggggacaagcagcctcagcctggcctctctgggccagctg
gacggacgcgttgctacgctggaagggcagatggtcgcggcctttgatctcgccaatacc
gtcgacagagacgcacagcgcggaattgcagcgatagcagcacaggcaaacccgcatttc
ccgagtgaggtaggaaagacaagctatgccagcaacttcgcggtctatcgtggagaagta
ggtttctccctcggcctgatgcatcgcctcgatagcgaaacaccgttcgctgtcaccgct
ggcgtcagctatgccggcggcaattccactgcagttcgcgccggtattgcaggagaattc
taa
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integrated database retrieval system