Alterisphingorhabdus coralli: RB602_13260
Help
Entry
RB602_13260 CDS
T10589
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa00521
Streptomycin biosynthesis
acoa00523
Polyketide sugar unit biosynthesis
acoa00541
Biosynthesis of various nucleotide sugars
acoa01100
Metabolic pathways
acoa01110
Biosynthesis of secondary metabolites
acoa01250
Biosynthesis of nucleotide sugars
Module
acoa_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RB602_13260 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RB602_13260 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RB602_13260 (rfbC)
Enzymes [BR:
acoa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RB602_13260 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF5473
Motif
Other DBs
NCBI-ProteinID:
WOE74797
UniProt:
A0AA97F7Q1
LinkDB
All DBs
Position
2842002..2842547
Genome browser
AA seq
181 aa
AA seq
DB search
MNIIDTLIPGPKIIEPRLFGDERGFFMETWNAASFAEAGFDMTWVQDNHSHSQKGVLRGL
HFQNPGPQGKLVRVARGSVFDVAVDLRRSSENFGKWVGVELSETNKRMFWVPEGFAHGFL
TLEDDTDFLYKCTAPFAPQSEHTLAWDDPAVGIEWPVADLDPIISEKDAFGLSLTDVKAF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgacactcttattcctggacccaagatcattgagccacgcttgttcggc
gatgagcggggcttcttcatggaaacctggaacgcagctagctttgccgaggccggcttt
gatatgacctgggtgcaggacaatcacagccactcgcaaaaaggcgtgctgcgcggactg
cattttcagaaccctgggccacagggcaagctggtgcgtgtagcacgcggttctgttttt
gacgttgcggttgatctgcggcgctcgtcggagaattttggcaaatgggtcggtgttgaa
ctgagtgagacgaacaagcggatgttctgggtacccgaaggctttgcgcatggcttcctc
acacttgaggacgacaccgatttcctttacaagtgcactgctcctttcgcgccgcaatcc
gagcacacattggcttgggatgatccagcggtgggcatcgaatggccggtggctgatctt
gatccgattatctccgagaaagacgcttttggtctttcgctaaccgacgtcaaggcgttc
gactga
DBGET
integrated database retrieval system