Alterisphingorhabdus coralli: RB602_14035
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Entry
RB602_14035 CDS
T10589
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03030
DNA replication
acoa03430
Mismatch repair
acoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB602_14035
03430 Mismatch repair
RB602_14035
03440 Homologous recombination
RB602_14035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoa03032
]
RB602_14035
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_14035
Enzymes [BR:
acoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB602_14035
DNA replication proteins [BR:
acoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RB602_14035
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RB602_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WOE74940
UniProt:
A0AA97I159
LinkDB
All DBs
Position
3008199..3008906
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AA seq
235 aa
AA seq
DB search
MSLAGSLGLPGWLAEPLWQRQWKKVVAEAKGTAMQGYYAAPQLAPDTPLGDVSIIALDFE
SDGLAEDAALLEVGWVTLRSGGIALSGARRRRIHVTKGLEAKAVTIHQITDSAAAEGAPE
AEVLGELLEALNGAVVLAHFAQIEAQFLNTACQRQFGVPFLGRFICTKHLEEHWFPKVRA
ADGLRLGKLRAQYGLPWYRAHDGLTDAIACAELFLAQLARKDAPSLTLGDVLCPM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttgccgggtctttggggctgcccggctggctggccgagcctttatggcagcgg
caatggaaaaaagtggtggctgaagcaaagggcaccgcgatgcaaggctattatgccgcg
ccgcagctcgcgccggatacgcccttgggcgacgtgtcgattatagcgctggattttgaa
agcgatggactggctgaggatgcggcgctgctggaggtgggatgggtaacgctgcgcagc
ggcggcattgctctctccggcgcacgcagacggcgcatccatgtcaccaaggggctcgaa
gcaaaagcagtgaccatccaccagattaccgacagtgccgccgctgaaggcgcgcccgag
gccgaggtgctgggtgaattgctggaggcgctgaatggtgcggtggtgctggcgcatttc
gcgcagattgaggcgcaatttctcaacaccgcctgccaacggcaatttggtgtgccgttt
cttggacgcttcatctgtaccaaacatctggaagaacactggtttccgaaagtgcgcgcc
gctgacgggctgcgtctcggcaagctgcgggcccaatatggcctgccctggtatcgcgcg
catgacggcctgaccgatgcgatcgcctgtgccgagctgttcctggcgcaattggcgcgc
aaggatgcgccttcgcttacactgggtgatgtgctgtgtccgatgtga
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