Alterisphingorhabdus coralli: RB602_14125
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Entry
RB602_14125 CDS
T10589
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
acoa Alterisphingorhabdus coralli
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoa03032
]
RB602_14125
03036 Chromosome and associated proteins [BR:
acoa03036
]
RB602_14125
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_14125
DNA replication proteins [BR:
acoa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RB602_14125
Chromosome and associated proteins [BR:
acoa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RB602_14125
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RB602_14125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
ClpB_D2-small
HMG_box
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WOE76677
UniProt:
A0AA97FBM7
LinkDB
All DBs
Position
complement(3028934..3029212)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELLQKLADENPELKPDEIEKIVDIFFNQIIQQLAEDGRVELRGFGAFSTRKREPRK
GRNPRTGEAVDVPAKRVPYFKPGKEMRERLNS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttccgagttgttgcagaaactggctgatgaaaatcccgaactgaaaccggac
gagatcgagaagatcgtcgatatcttctttaaccagatcatccagcaactggccgaggat
ggccgggtcgaactgcgcggctttggtgctttctcaacccgcaagcgcgaaccacgcaag
ggccgcaatccgcgcaccggcgaggcggtggatgtgcctgccaagcgcgttccctatttc
aaacctggcaaggaaatgcgcgagcggctgaatagctga
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