Alterisphingorhabdus coralli: RB602_14415
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Entry
RB602_14415 CDS
T10589
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB602_14415 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoa03400
]
RB602_14415 (mutM)
Enzymes [BR:
acoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RB602_14415 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RB602_14415 (mutM)
DNA repair and recombination proteins [BR:
acoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB602_14415 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WOE75010
UniProt:
A0AA97F9L2
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All DBs
Position
3092050..3092871
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AA seq
273 aa
AA seq
DB search
MPELPEVETTVRGLAAVLDGARLTAVTPRRADMRYPIPADLRQRMTGATVTGLGRRAKYG
LIDTDRGDTMIFHLGMSGRWRIDPEALDKHDHLLLETESGHQLALNDPRRFGSVDLVTTD
ALDDFPAFAKMGPEPLSDEFDGAHLAAAFAGRMRPVKALLLDQHVVAGLGNIYVCEALNI
ARISPNRKGAFIGRQRINALVDAIKAVLEKAIADGGSTLRDYARPDGELGYFSTQWRAYG
REGEPCPCGRPGVTIRRIVQSGRSTFYCPHCQR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacccgaagttgaaacaacagtgcgcggtctggccgccgtactggacggc
gcgcgcctgacagcagtgacgccgcgccgggccgatatgcgctatccgattcccgccgat
ctgcgccagcggatgacgggcgcgaccgtgaccggtcttggtcgccgggcgaaatatggc
ctgatcgatactgatcgcggcgacaccatgatctttcatcttggcatgtcggggcgctgg
cggattgaccccgaagcactcgacaagcatgaccatttgctgctcgagaccgagagcggg
catcaattggcgctgaatgatccacgccgctttggttcggttgacctggtaactaccgat
gctctcgatgatttccctgctttcgccaaaatgggtccggaacccttgagcgatgagttt
gacggcgcgcatctcgccgccgcctttgccggacggatgcggccggtcaaggcgctattg
ctcgaccagcatgtcgtggcggggctgggcaatatctatgtgtgcgaggcgctgaatatc
gcgcgcatatcacccaaccgcaaaggggcgtttatcgggcggcagcggatcaacgcgctg
gtcgatgcgatcaaggcagtgctggaaaaagcgattgccgatggcggctctaccctgcgc
gactatgcccggcctgatggcgaactcggctatttctcgactcaatggcgtgcctatggg
cgggaaggcgagccatgcccctgtggccgccccggtgtgacgatacggcgcattgtccag
tcgggccgctccaccttttattgcccgcattgccagcgataa
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