Candidatus Andeanibacterium colombiense: P0Y56_00740
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Entry
P0Y56_00740 CDS
T09799
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
acob
Candidatus Andeanibacterium colombiense
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acob03400
]
P0Y56_00740 (addA)
Enzymes [BR:
acob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0Y56_00740 (addA)
DNA repair and recombination proteins [BR:
acob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
P0Y56_00740 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WEK46846
UniProt:
A0AAJ5X707
LinkDB
All DBs
Position
151089..154538
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AA seq
1149 aa
AA seq
DB search
MSGKVYPLKGNQARAVDPRETVWLSASAGTGKTQVLSARVLRLLLQPDVAPGEILCLTFT
KAGAAEMATRVNEVLASWVRMDDTLLAQDLGHIGADIGPETRARARTLFASVLDCPGGGL
RIDTIHAFAQWLLSAFPEEAGLTPGTRAMEDRDRDLLAREVLAAMLVEADERGDRAMLDT
LADLSLKKGPDAVEAWLMTCAKARKAWFGPGRWEPPLRDRVNRLLGLAGDASEADAAALC
SDELFDVDALECCLAAYRQWNGKKGQEGRVVIADWLAAAPVERLAGLAELHKVLFTLKDT
VRDVPSLEKFESEFGYAAEQVLQSSLRVRELQVLLALSAWLTPALELGRKFALEWDEAKA
REGLIDFDDQIRQASDLLNRSDLGEWIRYKLDRRFDHILVDEAQDTNAEQWQIIDALTGD
FFAGLGQHGDKLRTLFVVGDYKQAIFRFQGTSPENFARARERVRQTMAGALEAALESRSR
GARELVDLGLGQSFRTAQPVLSFVDTAIGTIGYARFGLSDEPEPHVGEERPGLVTLWRPV
TAAPDEEEGEETWLSGSERRLADRIARQVRQWLDQGFALQKGSHRNAGPGDIMVLVRKRR
DLAGLIVARLHAAGVPVAGVDRLRLGAPLAVKDLMAALRFAAQPLDDLNLANLLVSPLIG
WSQKDLLDHAWRPEPEPNRRLPKLWEHLRQSSAPFVRDTLERLGQLLARADYEPPQALLH
WMLVGPWRGRRALVARLGHEANDPIDELLNAAFNYASAHTPSLQGFIRWFDVGEGELKRE
AGASEGLVRVMTVHGAKGLQAPIVILADAAGDPDKSPPRGLELAELDPGDRVMPLPGLTG
DERVGRIAEAESVTAAAEREEHWRLLYVAMTRAEEALFIGGSLGTREQEPAPDSWFARLR
PLFGEEAIEDRIWGEIRELGYRAAPVAGKAEAGLQVRIEVPDWAIRPIGPEPRPPRPLAP
SAAGEDAGAAPPLPPGALKEVARRGTLIHGLLERLPELPREARTAAAARWLARQAGDLPE
DERTKMVDAALRVLDTPDWAGIFGPDALAEVPLAATVAGRVIAGTADRLLVTKERVLLVD
FKTAARPPQNLEAIPLTTVRQMAAYVAALEAIYPGRPVEAAVLYTRTPQLFALPAALIEA
HKSVLSPAE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaggtttacccgctgaagggcaaccaggcgcgcgcggtcgatccgcgcgag
accgtgtggctctccgcttcggccggcaccggcaagacccaggtgctctcggcgcgggtc
ctgcggctgttgcttcagcccgatgtcgcgccgggcgaaatcctgtgcctgaccttcacc
aaggccggcgcggctgaaatggcgacgcgggtcaacgaagtcctcgcgagctgggtgcgg
atggacgacacgctgcttgcacaggacctcggccatatcggtgccgacataggcccggaa
acgcgcgcgcgcgcccgaaccctgttcgccagcgttctcgattgccccggcggcgggctg
cggatcgatacgatccacgctttcgcgcaatggctgctctcggcctttcccgaggaggcc
ggcctcacccccggcaccagggcgatggaggatcgcgaccgcgacctgctcgcgcgcgaa
gtgctcgcggcgatgctcgtcgaggccgatgaacggggcgaccgggcgatgctcgatacg
cttgccgatctgtcgctgaagaaaggtcccgacgcggtcgaggcctggctgatgacctgt
gcgaaggcgcgcaaggcgtggttcggtcccggccggtgggaaccgccgctgcgcgaccgg
gtaaaccggctgctcgggctggctggggatgcgagcgaggcggatgcggcggcgctgtgt
tcggacgagctgttcgatgtcgacgcactcgaatgctgcctcgcggcctatcgccaatgg
aacggcaagaaagggcaggaaggccgggtggtgatcgccgactggcttgccgccgcaccg
gtggagcggctcgccgggctggcggagttgcacaaggtcctgttcacgctgaaggatacg
gtgagggatgttccctcgctcgaaaagttcgaatccgaattcggctatgcggcagagcag
gtgctgcaaagctcgctgcgggtgcgcgaattgcaggtgctgctggcgctttcggcgtgg
ctgaccccggcgctcgaactcgggcgcaaattcgcgctggaatgggacgaggccaaggcg
cgcgaaggcttgatcgatttcgacgaccagatccgccaggcttccgacctgctcaaccgc
tccgacctcggcgagtggatccgctacaagctcgaccggcgcttcgaccatatcctggtc
gacgaggcgcaggacaccaatgccgagcaatggcagatcatcgatgcgctgaccggcgat
ttcttcgccggtctcggccagcatggcgacaaattgcgcaccctgttcgtggtcggcgat
tacaaacaagcgatcttccgtttccagggcaccagcccggagaatttcgcgcgggcgcgc
gagcgggtgcggcaaacgatggccggcgcgcttgaagctgcgctcgaaagccgctcgcgc
ggcgcgcgcgaattggtcgatctcggactcggacagagtttccgcaccgcgcagccggtg
ctcagcttcgtcgacactgcgatcggcaccatcggctatgcgcgcttcgggctctcggac
gaaccggagccgcatgtcggcgaagaacgcccgggcctcgtgacactgtggcgaccggtc
acggctgccccggatgaggaggagggtgaggaaacctggctctccggttccgaacgccgg
ttggccgaccggatcgcgcggcaggtgcgccagtggctcgatcagggctttgcgctgcaa
aagggcagtcatcgcaacgccgggccgggcgacatcatggtgctcgtccgcaagcgccgc
gaccttgccgggctgattgtcgcgcggctccatgcggcaggcgtgccggttgccggggtg
gaccggttgcggctcggtgcgccactggcggtgaaggatctgatggccgccttgcgcttc
gccgcgcagccgctcgacgatctcaaccttgccaatctgctggtttcgccgctgatcggc
tggagccaaaaggatctgctcgatcacgcgtggcggccggagcccgagccgaaccggcgc
ctgccgaaattgtgggaacacctgcgccagtcctccgcgccattcgtgcgcgacacgctc
gaaaggctcggccaattgctcgcccgcgccgattacgaaccgccgcaggcattgctgcac
tggatgctggtcgggccctggcgggggcgcagggctctggtcgcgcggctggggcacgag
gccaacgatccgatcgacgaattgctcaacgcagcgttcaactatgcttcggcgcatacg
ccgagcctgcagggctttattcgctggttcgatgtcggcgagggcgagctgaagcgcgaa
gccggcgccagcgaagggcttgtgcgggtgatgacggtccacggtgccaaggggctgcag
gcgccgatcgtgatccttgccgacgccgcgggcgatccggacaagtcccccccgcgtggg
ctggaactggcggaactggatccgggcgaccgggtgatgccgctccccggattgaccggc
gacgagcgggtcgggcgaatcgccgaggccgaatcggtgaccgctgcggccgagcgagag
gaacactggcgcctgctctatgtcgcgatgacccgcgcggaggaggcgctgttcatcggc
ggctcgctcggcacgcgcgagcaggaacccgcgcccgacagctggttcgcgcggctgcgt
ccgctgttcggcgaagaagcgatcgaggaccggatctggggcgagatccgggaactcggc
tatcgcgccgctcctgtcgccgggaaggcagaggcggggctgcaggtccggatcgaggtg
ccggattgggcgatccgcccgatcggccccgaaccgcgcccgccacggccgctcgcgcct
tccgccgcgggagaggacgccggcgcggcaccgccgctgccgcccggcgcgctcaaggaa
gtcgcgcggcgcggcacgctgatccacgggttgctcgaacgcttgccagaattgccgcgc
gaggcgcgcaccgccgcagcggcgcgctggcttgcgcggcaggcgggcgacctgccagaa
gacgagcgcaccaagatggtggatgcggcgctgcgggtgctcgacactcccgattgggcc
gggattttcggacccgacgcgctggccgaagttccgctggccgcgacggtcgcgggcagg
gtcatcgccggcaccgccgatcgcctgctggtcacgaaggagcgcgtgctgctggtcgat
ttcaagaccgccgcgcgtccgccacagaacctcgaagcgatcccgctcacgacggttcgg
cagatggcggcctatgtcgccgcgcttgaggcgatctatcccggcaggccggtcgaggcg
gcggtgctctacacccggacgccgcagcttttcgcgcttccggcggcgctgatcgaggcg
cacaaatcggtcttgtccccggcggagtaa
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