KEGG   Candidatus Andeanibacterium colombiense: P0Y56_01245
Entry
P0Y56_01245       CDS       T09799                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
acob  Candidatus Andeanibacterium colombiense
Pathway
acob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P0Y56_01245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acob03019]
    P0Y56_01245
Messenger RNA biogenesis [BR:acob03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     P0Y56_01245
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 RNase_J_C HTH_71 DUF7205
Other DBs
NCBI-ProteinID: WEK46940
UniProt: A0AAJ5X6N3
LinkDB
Position
264846..266483
AA seq 545 aa
MKKDFTPERELLFLALGGSGEIGMNVNLYGCDGKWLMVDLGMSFGANEYPGTELVFADPA
FIEERLDDLIGIVLTHGHEDHIGAIPYFAADFGVPLYATPFTADLITRKLDEAGITDRVE
LNVVEDLDPFDLGPFEISYIPLAHSIAEGHALLIDTPYGRIFHTGDWKLDDEPLVGIPAT
AEELTKLGDQGILAMVCDSTNVFNPEASGSEGEVYRGLLKEAGRHAGKRLVVTTFASNVA
RLHTLGEVAKATGRELCVAGRSLDRIIEVGKANGYFTDLPPVIDFDRAMKLPRGKVLIVA
TGGQGEPRAALARMAEGEHPIELAEGDVVLFSSRQIPGNEIAIGRIQNVFAQKGIVMVTD
RQSPIHVSGHPGRPELEALYSWIRPEILVPVHGEIRHMAEQGRLGAKSGIPKQVVQKNGD
IVRLAPGKPGKIAETHTGRLILDGDIIVPADGDAITMRRRMARDGVVIVVLGSQGEISVQ
GIGLPLDEDYDAFVKEAVGDVRDALKRLRKRDDSEIRETARLAARRAALRWSGKKPQTRV
ILAGD
NT seq 1638 nt   +upstreamnt  +downstreamnt
ttgaagaaagatttcacacccgaaagggaattgctgtttctcgcgctcggtggatcgggg
gaaatcggcatgaacgtcaacctctacgggtgcgacgggaagtggctgatggtcgatctc
gggatgagtttcggcgctaacgaatatccgggtaccgaactggtattcgctgatcccgcc
ttcatcgaagagcggctcgacgatctgatcggcatcgtcctcacccacgggcacgaagac
catatcggcgcgattccctatttcgcggccgatttcggcgtgccgctttacgccaccccg
ttcaccgcggacctgatcacccgcaagctcgacgaggccgggatcaccgatcgggtcgag
ctgaacgtggtcgaggacctcgatcccttcgatctcgggccgttcgagatctcctacatt
ccgctcgcccactcgatcgccgaaggccacgcgctgctgatcgacacgccctacggccgg
atattccataccggcgactggaagcttgatgacgagccgctggtcggcattccggctacc
gccgaggagctgaccaagctcggcgaccagggcattctcgcgatggtgtgcgattcgacc
aatgtcttcaatcccgaggcttcgggatcggaaggcgaggtctatcgcgggcttctgaaa
gaggcagggcggcatgccggcaagcgcctggtcgtgacgaccttcgccagcaacgtcgcg
cggctgcatacgctcggcgaggttgccaaggcaaccgggcgcgaattatgcgtcgcaggg
cgctcgctcgaccggatcatcgaggtcggtaaggccaatggctatttcaccgatcttccg
ccggtcatcgatttcgaccgcgcgatgaaactgccgcgcggcaaggtgctgatcgtcgcg
accggcgggcagggcgagccgcgcgcggcgctcgcgcgcatggccgaaggcgaacatccg
atcgaactggccgagggcgatgtcgtgctgttttccagccgccagatccccggcaacgaa
atcgcgatcgggcgcattcagaacgtcttcgcgcaaaagggcatcgtgatggtgaccgat
cggcagagcccgatccacgtctccggccatccgggacggccggagctcgaagcgctctac
agctggatccggccagagatcctcgtgccggtccacggcgagatccgccacatggcggaa
cagggccggcttggcgcgaagagcggcattccgaaacaggtggttcagaagaacggcgac
atcgtccgcctcgcacccggaaagcccggcaagatcgccgagacccacaccggccgcctg
atccttgatggcgacatcatcgttccagccgatggcgacgcaatcaccatgcgccgccgg
atggcgcgtgacggtgtggtgatcgtggtgctcggatcccagggggaaatctcggtgcaa
ggcatcggcctgccgctggacgaggattacgatgccttcgtcaaggaggcggtcggcgat
gtccgcgacgcgctcaaacggctgcgcaaacgcgacgacagcgaaatccgtgaaactgcc
cggcttgccgcccgccgcgccgcattgcgctggagcggcaagaagccccagacacgcgta
atcctggcgggagactga

DBGET integrated database retrieval system