Candidatus Andeanibacterium colombiense: P0Y56_04575
Help
Entry
P0Y56_04575 CDS
T09799
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob00300
Lysine biosynthesis
acob00470
D-Amino acid metabolism
acob01100
Metabolic pathways
acob01110
Biosynthesis of secondary metabolites
acob01120
Microbial metabolism in diverse environments
acob01230
Biosynthesis of amino acids
Module
acob_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P0Y56_04575 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P0Y56_04575 (lysA)
Enzymes [BR:
acob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
P0Y56_04575 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WEK47574
UniProt:
A0AAJ6BNN6
LinkDB
All DBs
Position
complement(912408..913667)
Genome browser
AA seq
419 aa
AA seq
DB search
MDHFELRNGELYAEDVPLARIAAEVGTPVYVYSRATLERHARVFREGLSGLDRVHLAFAV
KSNPNLAVLRVLQREGYGADVVSGGELERALRSGMAAEDVVFSGVGKTARELARGLDAAV
GQFNIESEEEGRELAAIAEARGQIARCALRVNPDVDAGTHEKISTGKKDNKFGVAIDEAP
GIYARLSALPGLDMRGVAVHIGSQLADLAPLEKAFIRLGVLIADLRAAGLKVTHADLGGG
LGVPYKAGEVMPSPAAYGAMVARVTAGWDVTLMFEPGRVIAGNAGVLLTTVIRVKRNGNR
DPFVIVDAAMNDLARPALYGSWHDFDAVRPTDRRMTANIVGPICETGDTFAMGRDIEALE
AGELAVFRTAGAYGATMASSYNSRGFVPEVLVDGDRYAIVADRIAPEAITDAERVPDWL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcgaactgaggaacggcgagctttacgccgaggacgtgccgctcgcccgc
atcgcggcggaagtcggcacgcctgtctacgtctattcgcgcgccactctggagcgccat
gcgcgggtgttccgcgaaggcctgtcgggcctcgaccgggtgcacctcgccttcgcggtg
aaatccaatcccaacctcgcggtgctgcgggtgctgcagcgcgaaggctatggcgccgat
gtcgtctcgggcggcgagctggagcgcgcgctgcgttcgggcatggcggcggaagacgtg
gtattctccggcgtcggcaagaccgcgcgggaacttgcccgcgggctcgacgcggcggtc
ggccagttcaacatcgaatccgaggaagagggccgcgagttggccgcgatcgccgaagca
cgcgggcagatcgcccgttgcgccttgcgggtgaacccggacgtcgatgccggcacgcat
gagaagatctcgaccggcaagaaggacaacaagttcggtgtcgcgatcgacgaggcgccg
ggaatctatgcgcggctttcggcgctgcccggcctcgatatgcgcggcgtcgcggtccac
atcggcagccagctggcggatctcgcgccgctggagaaggccttcatccgcctcggggta
ctgatcgccgatctgcgcgcggcgggcctgaaggtcacccatgccgatctcggcggcgga
ttgggcgtgccctacaaggccggagaagtgatgccgagccccgccgcctacggcgcgatg
gtcgcgcgggtgaccgcgggctgggatgtcacgctgatgttcgaaccgggccgggtgatc
gcgggcaatgccggggtgctgctgaccacggtgatccgggtgaagcgcaacggcaaccgc
gacccgttcgtgatcgtcgatgccgcgatgaacgatctcgcgcgcccggcgctctacggc
tcgtggcacgatttcgacgcggtgcgcccgaccgaccgccggatgaccgcgaacatcgtc
ggcccgatctgcgaaacgggcgacactttcgcgatggggcgcgacatcgaggcactcgaa
gccggtgagctggcggtgttccgcactgctggagcttacggtgcgacgatggcctccagc
tacaacagccgcggcttcgtgcccgaagtgctggtcgatggcgaccgctacgcgatcgtc
gccgaccgcattgccccggaagcgatcaccgacgccgagcgggttccggactggctctga
DBGET
integrated database retrieval system