Candidatus Andeanibacterium colombiense: P0Y56_05750 Help Entry P0Y56_05750       CDS       T09799                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism acob  Candidatus Andeanibacterium colombiense Pathway acob03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:acob00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     P0Y56_05750 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:acob03400]     P0Y56_05750 (ligD) Enzymes [BR:acob01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      P0Y56_05750 (ligD) DNA repair and recombination proteins [BR:acob03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      P0Y56_05750 (ligD) BRITE hierarchy Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S RNA_ligase BT4734-like_N Motif Other DBs NCBI-ProteinID:  WEK47798 LinkDB All DBs Position complement(1148842..1151379) Genome browser AA seq 845 aa AA seqDB search MAAPDLLAEYNRKRDFKKTAEPAGKRETSKSGQIFIVQKHDATRLHWDFRLEAEGVLKSW AVTKGPSPDPEIKRLAVRTEDHPMAYARFEGIIPEAEYGGGSVMLWDQGTWEPVPGKSAK DIEKGHLHFVLHGERMKGEWLLIRLKPRPGEKRENWLLRKLDDAFAEPGDPLVERGLTSV LTGRSMAEIAGDTKGSHSLKGKRGKAFAAEMEAAAGYNATTAKARSKPAPRGSKAPTFRP PQLATLVDAVPAGNQWMHEIKFDGYRALVAAAGDKVTVYTRSGKDWTDKFGPLAEAIRAL DLPPSLIDGEIVAYDADGNPDFSSLQKVLKRGHGSQTANDALAFHAFDLLELNGEDLTEQ PNIERRERLEALLKQAQPPIHVADHVIGAGEKLYRAMCAAGQEGIISKRIDAPYKSRRTQ SWVKVKCTLRQEFVIAGWAKSSAKGRPFRSLALAQHEDGKLVYKGKVGTGFDADALDDLA KRFAKLEGGTPPEGVERAEARGVTWIKPELVAEIAFAEITADGHVRHGSYLGLRGDKKAK DVAPETAKEAPVDEPAVTITSRDRVIFPGDGYTKGDLADYYTEMAPLMLAFMARRPISLI RCPEGRAKQCFFQKHDSGGMGPHVRHVPIREKDGSMEDYLYVEDAAGILSCVQFGSIEFH GWQCRSTDVEAPDRMIFDLDPDEGLDFGDVKQAAEDIRDRLSEIGLTSFAMLSGGKGVHV VVPLTNPGGSEGHSWDEHKDFAKRFAEALSMAEPERFIATMSKAKRKGKIFIDWLRNQRG ATAVMPYSARAREGAPVAVPIAWGELGGMKDAHPFSIGDAKKLLAHAMGKGLAGWGFVEQ SLPEI NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt atggccgcgccggaccttcttgccgaatataaccgtaagcgcgatttcaagaaaaccgcc gagcctgcaggcaagcgcgagacgagtaaatcgggccagatcttcatcgtgcagaagcac gatgcgaccagattgcattgggatttcaggctcgaagctgaaggtgttctgaagagttgg gcagtcaccaagggtccgtcgcccgatcccgagatcaaacggttggcagtccggaccgag gaccatccgatggcttatgcccggtttgagggaatcattcccgaggccgaatatgggggc ggatcggtgatgctgtgggaccagggtacctgggagcctgtacctggcaaaagcgccaag gatatcgagaaaggccacctccatttcgtgctccacggggagcggatgaagggcgagtgg ctgctgatccggctcaagccgcgacccggagagaagcgtgagaactggctgctgcgcaag ttggacgacgcattcgcagagccgggcgatccgctggtcgagcgcgggctgacgagtgtg ctgaccggccgttcgatggccgaaatcgccggagatacaaagggttcacactcactcaag ggaaagcgcggcaaggctttcgcggccgaaatggaggccgcggcgggctataacgcaacg acggccaaggcgcgttcaaagcccgccccgcggggttcaaaggcccccaccttccgtcca ccgcagcttgcgaccttggtagacgcggttcctgccggcaaccagtggatgcacgagatc aagttcgacggataccgcgcgctggtcgcggcagcgggcgacaaggtcaccgtctacacc cgctcgggcaaagactggaccgacaagttcggcccgctcgccgaagcgatccgcgcgctc gatttgccgccctcgctgattgacggcgagatcgtcgcctacgatgcggatggcaatccg gatttctcctcgcttcagaaagtgctcaagcgcgggcacggctcgcagaccgccaacgac gcgctcgccttccacgctttcgatctgctggaactcaatggcgaggatctgaccgagcag ccgaacatcgaacggcgcgagcggcttgaggcgctgctcaagcaggcgcagccgccgatc catgtcgccgaccatgtgatcggcgcaggcgagaagctttaccgcgcgatgtgcgcggcg gggcaggaggggatcatctcgaagcggatcgatgcgccttacaagagccggcggacgcag tcgtgggtcaaggttaaatgcaccctgcgccaggaattcgtgatcgccggctgggccaag agttcggcgaagggacgtccgttccgttcgctcgcgctggcacagcacgaggacgggaag ctggtctacaagggcaaggtcgggaccggcttcgacgccgatgcgctcgacgatctcgcg aagcggttcgccaagctcgaaggtggaaccccacccgaaggcgttgagcgggccgaggcg cgcggggtcacctggatcaagccggaactggtggcagagatcgccttcgctgaaatcacg gccgatggccatgttcggcacggctcgtatctgggtctcaggggtgacaaaaaggcgaag gatgtggctcccgagacggccaaggaggcgcccgtggacgaacccgccgtgaccatcacc agccgcgaccgggtgatcttccccggcgacggctacaccaagggcgaccttgcagactac tataccgagatggcgccgctgatgctggcgtttatggcgcggcgcccgatcagcctgatt cgctgccccgagggccgcgccaagcaatgcttcttccagaagcacgacagcggcgggatg ggtccgcatgtgcgccacgtccctatccgcgagaaggacgggagcatggaggattacctc tatgtcgaggacgccgccggaatcctctcctgcgtccagttcggctcgatcgaattccac ggctggcaatgccgcagcaccgatgtcgaagcacccgaccggatgatcttcgatctcgat cccgacgaaggtctcgattttggcgatgtgaaacaggcggccgaggacattcgcgatcgc ctgtccgaaatcggcctgaccagcttcgcgatgctttcgggtggaaagggcgtgcacgtg gtcgtgccgctgacgaatcccggcggatcggaagggcattcgtgggatgaacacaaggat ttcgcgaagcgcttcgccgaggcgcttagcatggccgagcccgagcgcttcatcgcgacg atgagcaaggccaagcgcaagggcaagatcttcatcgactggctgcgcaatcagcgcggc gcgaccgcggtgatgccctattcggcgcgggcccgcgaaggcgcgccggtcgctgtgccg atcgcttggggcgaactcggcggaatgaaggacgcgcatccgttctcgatcggcgatgcg aagaaactgctcgcacatgcaatgggcaagggcctcgcgggctggggcttcgtggagcag agcctgccggaaatctga

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