Candidatus Andeanibacterium colombiense: P0Y56_11925
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Entry
P0Y56_11925 CDS
T09799
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P0Y56_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acob03400
]
P0Y56_11925
Enzymes [BR:
acob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
P0Y56_11925
DNA repair and recombination proteins [BR:
acob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P0Y56_11925
BRITE hierarchy
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
WEK48449
LinkDB
All DBs
Position
2418929..2420311
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AA seq
460 aa
AA seq
DB search
MLAQAISVTLERPDDFDGWRDAARACLMAGLPPDAVSWAGDLFASAAPIPPPAPDAEQPK
VSRAFLQLAQTALIHSEPQRFDLLYRLLWRLQRDPRLLEDHADLLIRRLEALAREVRRDI
HKMRAFVRFRAVEDEWGERFVAWFEPEHHILRRNAGFFVNRFASMRWSILTPRGSLDWDG
EILREGPPARRGDAPQGDPTEALWRDYYAATFNPARLKIGAMLKEMPRKYWKNMPETALI
PQLVAGARARELAMVDAGSDLFADAERAETLDGIAEAIQRCRRCPIGCNGTNAVGGEGTA
GAALMVVGEQPGDVEETQGRPFVGPAGRVLMEHLDHAGIDRAQAYVTNAVKHFKFEQRGK
RRLHKTPTAKEIDICRFWLDGERALVKTRVILALGASAARGVLGKTVSLEAMRGAAHKLD
DGSELWVTNHPSYLLRLQDGVRHEAEQRFAADLAKVAGRL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcacaggcgatctcggtcacgctcgaacggcccgacgacttcgacggctggcgc
gatgcggcgcgcgcctgtctgatggccggtctgccgcccgatgcggtgagctgggccggc
gatctgttcgcgagcgccgcgcctatcccgccgcccgcgcccgatgccgaacagcctaaa
gtttcgcgcgcctttctccagctcgcccagactgctctgatccattctgaaccccagcgc
ttcgatctgctctaccgcctgctgtggcgcctccagcgcgacccgcggctgctggaagac
catgccgatttgctgatccgccggctcgaagctttggcgcgcgaagtgcggcgcgacatc
cacaagatgcgtgccttcgtccgcttccgtgcagtcgaggacgagtggggcgagcgtttc
gtcgcatggttcgagcccgagcatcacatattgcgccgcaacgccgggttcttcgtcaac
cgcttcgccagcatgcgctggtcgatcctcaccccgcgcggctcgctcgactgggatggc
gagattttacgcgaaggccctccggcgcggcgcggcgatgcgccgcaaggagatccgacc
gaagcgctttggcgcgattactatgcggccactttcaatcccgcgcgtttgaagatcggc
gcgatgctcaaggagatgccgcgcaaatattggaagaacatgcccgagaccgcgctgatc
ccccagctggtcgcgggcgcacgagcaagggagctggcgatggtcgatgccggaagcgat
ctgtttgccgatgcggagcgggccgagacgctggacggcatcgccgaggcgatccagcgc
tgccgtcgctgcccaatcggctgcaacggcacgaacgcggtcggcggcgagggcacggcg
ggtgcagcgcttatggtagtcggcgagcagccaggcgatgtcgaggaaacccaagggcgg
ccgttcgtcggtccggccggtcgggtgctgatggagcatctcgatcacgccgggatcgac
cgggcacaggcctatgtcaccaatgcggtcaagcatttcaagttcgagcagcggggcaag
cggcggctgcacaagaccccgaccgcgaaggaaatcgacatctgccgcttctggctcgac
ggtgagcgcgcgctggtgaagacgcgcgtgatcctcgcgctcggcgccagcgcggcgcgc
ggggtgctgggcaaaacggtcagcctcgaagcgatgcgcggcgcggcgcacaaactcgac
gacggcagcgaactatgggtgacgaaccacccgtcctatctgctgcgcctgcaggacggc
gtccggcatgaggccgaacaacgcttcgccgcagacctggcgaaggtggccgggcggctc
taa
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integrated database retrieval system
