KEGG   Candidatus Andeanibacterium colombiense: P0Y56_16880
Entry
P0Y56_16880       CDS       T09799                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
acob  Candidatus Andeanibacterium colombiense
Pathway
acob03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    P0Y56_16880 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acob03400]
    P0Y56_16880 (uvrB)
DNA repair and recombination proteins [BR:acob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P0Y56_16880 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      P0Y56_16880 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H DUF87 AAA_22 AAA_19 SRP54 Microtub_bd
Other DBs
NCBI-ProteinID: WEK46657
UniProt: A0AAJ6BN24
LinkDB
Position
complement(3484735..3486924)
AA seq 729 aa
MPELVIRRGLEEPDTSGTFTPHRPERPEKAMGGKPFKLVSEYEPAGDQPAAIAELVAGAK
LDDKTQVLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERHDVIIVASVSCLYGIG
SVETYSAMIFDLKKGATTDQGEIIRKLVALQYKRNDTAFTRGCFRVRGDSLEIFPSHYED
MAWRVSFFGDEIEEISEFDPLTGTRGASLDTVRVYANSHYVTPGPTMKQAAAAIRFELTE
RLKELEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGNWEMEQSGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCINECRLTAEKGYRT
LVTTLTKRMSEDLTEFMHEAGLRVRYMHSDTETLERIELIRDLRMGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADRITGSMERAMAETD
RRREKQRAYNEEHGITPETIKRGIQDIVAHTASRDGVLVEIEAEDGRNNLVGHNLRAYIE
ELERKMRAAAADLEFEEAGRLRDEIRKLEADELGLPGEPSHAPLVGRSNEGKPGTRKTRY
GKTQRKWGR
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgcccgaattggtgatcagacgcggacttgaagagccggatacctccggcacgttcacc
ccacaccggcccgagcggcccgagaaggcgatgggcggcaagccgttcaagctggtctcc
gaatacgaaccggccggcgaccagccggccgcgatcgcggaactcgtcgcgggcgcgaag
ctcgacgacaagacccaggtactgctcggcgtcaccggcagcggcaagaccttcaccatg
gccaaggtgatcgagacgctgcagcgcccggcactgatcctcgcgcccaacaagatcctc
gccgcgcagctctatggcgagttcaagagcttcttccccgagaatgcggtcgaatatttc
gtcagctattacgattactaccagcccgaggcatacgtcccccgcagcgacacttacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccattcggccacccgcgcg
ctgctcgaacgccacgacgtgatcatcgtcgcatcggtctcctgcctctacggcatcggc
tcggtcgaaacctattcggcgatgatcttcgacctcaagaagggcgcgaccaccgatcag
ggcgagatcatccgcaagctcgtggcgctgcaatacaaacgcaacgataccgccttcacc
cgcggctgcttccgcgtgcgcggcgacagtctcgagatattcccgagccattacgaagac
atggcctggcgggtcagcttcttcggcgacgagatcgaggagatcagcgaattcgatccg
ctgaccggaaccaggggcgcgagcctcgacacggtgcgggtctacgccaattcgcattat
gtgacccccggcccgacgatgaagcaggcggccgcggcaatccgcttcgagctgaccgag
cggctcaaggagctggaagcggaaggcaagttgctcgagcaccagcggctcgaacagcgc
accaatttcgaccttgagatgatcgcggcgaccggcagttgcgcggggatcgagaactat
tcgcgcttcctcaccggccgcctgccgggcgaaccgccgccgacattgttcgaatatctg
ccggagaacgcgctgctgttcgtcgatgaaagccaccagaccgtgccgcagatcggcgcg
atgtcgaagggcgaccaccggcgcaagattaccctcgccgaatacggcttccgcctgccg
agctgcatcgacaaccgcccgctgcgcttcaacgaatgggatgcgatgcgcccgcagacc
ttcgcggtctcggccacgccgggcaattgggagatggagcaatcgggcggcgtgttcgcc
gaacaggtgatccgcccgaccgggctgatcgatccgccggtcgaaatccgcccggtcgag
gaccaggtgcaggattgcatcaacgagtgccgcctgaccgccgagaagggctatcgcacg
ctcgtcaccacgctgaccaagcgcatgtccgaagaccttaccgagttcatgcacgaggcg
ggactgcgcgtgcgctacatgcattcggataccgagacgctcgaacgcatcgagctgatc
cgcgacctgcgcatgggcgtgtatgacgtgctggtcgggatcaatttgctgcgcgaaggg
ctcgacattcccgaatgcgggctggtctgcatcctcgatgcggacaaggaagggttcctg
cgctccgaaacttcgctggtccagacgatcggccgcgccgcgcgcaatgtcgacggcaag
gtgatcctctatgccgaccggatcaccggcagcatggaacgcgcgatggccgaaaccgac
cgtcgccgcgagaagcagcgcgcctataacgaagagcacgggatcaccccggagacgatc
aagcgcggcatccaggacatcgtcgcccacaccgccagccgcgacggtgtgctggtcgag
atcgaggcggaggacgggcgcaacaacctcgtcggccacaatttgcgcgcctatatcgag
gagctggagcgcaagatgcgcgcggcggcggccgatctcgaattcgaggaagccgggcgc
ctcagggacgagatccgcaagctggaagccgacgagctcggcctcccgggcgaaccctcc
cacgccccgctggtcgggcggagcaacgagggcaagccgggcacccgcaagacccgctac
ggcaagacgcagcggaagtggggccgctga

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