Candidatus Andeanibacterium colombiense: P0Y56_16880
Help
Entry
P0Y56_16880 CDS
T09799
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P0Y56_16880 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acob03400
]
P0Y56_16880 (uvrB)
DNA repair and recombination proteins [BR:
acob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P0Y56_16880 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P0Y56_16880 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
AAA_19
SRP54
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WEK46657
UniProt:
A0AAJ6BN24
LinkDB
All DBs
Position
complement(3484735..3486924)
Genome browser
AA seq
729 aa
AA seq
DB search
MPELVIRRGLEEPDTSGTFTPHRPERPEKAMGGKPFKLVSEYEPAGDQPAAIAELVAGAK
LDDKTQVLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERHDVIIVASVSCLYGIG
SVETYSAMIFDLKKGATTDQGEIIRKLVALQYKRNDTAFTRGCFRVRGDSLEIFPSHYED
MAWRVSFFGDEIEEISEFDPLTGTRGASLDTVRVYANSHYVTPGPTMKQAAAAIRFELTE
RLKELEAEGKLLEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGNWEMEQSGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCINECRLTAEKGYRT
LVTTLTKRMSEDLTEFMHEAGLRVRYMHSDTETLERIELIRDLRMGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADRITGSMERAMAETD
RRREKQRAYNEEHGITPETIKRGIQDIVAHTASRDGVLVEIEAEDGRNNLVGHNLRAYIE
ELERKMRAAAADLEFEEAGRLRDEIRKLEADELGLPGEPSHAPLVGRSNEGKPGTRKTRY
GKTQRKWGR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattggtgatcagacgcggacttgaagagccggatacctccggcacgttcacc
ccacaccggcccgagcggcccgagaaggcgatgggcggcaagccgttcaagctggtctcc
gaatacgaaccggccggcgaccagccggccgcgatcgcggaactcgtcgcgggcgcgaag
ctcgacgacaagacccaggtactgctcggcgtcaccggcagcggcaagaccttcaccatg
gccaaggtgatcgagacgctgcagcgcccggcactgatcctcgcgcccaacaagatcctc
gccgcgcagctctatggcgagttcaagagcttcttccccgagaatgcggtcgaatatttc
gtcagctattacgattactaccagcccgaggcatacgtcccccgcagcgacacttacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccattcggccacccgcgcg
ctgctcgaacgccacgacgtgatcatcgtcgcatcggtctcctgcctctacggcatcggc
tcggtcgaaacctattcggcgatgatcttcgacctcaagaagggcgcgaccaccgatcag
ggcgagatcatccgcaagctcgtggcgctgcaatacaaacgcaacgataccgccttcacc
cgcggctgcttccgcgtgcgcggcgacagtctcgagatattcccgagccattacgaagac
atggcctggcgggtcagcttcttcggcgacgagatcgaggagatcagcgaattcgatccg
ctgaccggaaccaggggcgcgagcctcgacacggtgcgggtctacgccaattcgcattat
gtgacccccggcccgacgatgaagcaggcggccgcggcaatccgcttcgagctgaccgag
cggctcaaggagctggaagcggaaggcaagttgctcgagcaccagcggctcgaacagcgc
accaatttcgaccttgagatgatcgcggcgaccggcagttgcgcggggatcgagaactat
tcgcgcttcctcaccggccgcctgccgggcgaaccgccgccgacattgttcgaatatctg
ccggagaacgcgctgctgttcgtcgatgaaagccaccagaccgtgccgcagatcggcgcg
atgtcgaagggcgaccaccggcgcaagattaccctcgccgaatacggcttccgcctgccg
agctgcatcgacaaccgcccgctgcgcttcaacgaatgggatgcgatgcgcccgcagacc
ttcgcggtctcggccacgccgggcaattgggagatggagcaatcgggcggcgtgttcgcc
gaacaggtgatccgcccgaccgggctgatcgatccgccggtcgaaatccgcccggtcgag
gaccaggtgcaggattgcatcaacgagtgccgcctgaccgccgagaagggctatcgcacg
ctcgtcaccacgctgaccaagcgcatgtccgaagaccttaccgagttcatgcacgaggcg
ggactgcgcgtgcgctacatgcattcggataccgagacgctcgaacgcatcgagctgatc
cgcgacctgcgcatgggcgtgtatgacgtgctggtcgggatcaatttgctgcgcgaaggg
ctcgacattcccgaatgcgggctggtctgcatcctcgatgcggacaaggaagggttcctg
cgctccgaaacttcgctggtccagacgatcggccgcgccgcgcgcaatgtcgacggcaag
gtgatcctctatgccgaccggatcaccggcagcatggaacgcgcgatggccgaaaccgac
cgtcgccgcgagaagcagcgcgcctataacgaagagcacgggatcaccccggagacgatc
aagcgcggcatccaggacatcgtcgcccacaccgccagccgcgacggtgtgctggtcgag
atcgaggcggaggacgggcgcaacaacctcgtcggccacaatttgcgcgcctatatcgag
gagctggagcgcaagatgcgcgcggcggcggccgatctcgaattcgaggaagccgggcgc
ctcagggacgagatccgcaagctggaagccgacgagctcggcctcccgggcgaaccctcc
cacgccccgctggtcgggcggagcaacgagggcaagccgggcacccgcaagacccgctac
ggcaagacgcagcggaagtggggccgctga
DBGET
integrated database retrieval system