Atta colombica: 108684214
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Entry
108684214 CDS
T11098
Name
(RefSeq) muscle calcium channel subunit alpha-1 isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoc04040
]
108684214
Ion channels [BR:
acoc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108684214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
T4SS_pilin
DUF8620
Motif
Other DBs
NCBI-GeneID:
108684214
NCBI-ProteinID:
XP_018043903
LinkDB
All DBs
Position
Unknown
AA seq
2170 aa
AA seq
DB search
MSAGGDGGSVLGPSARLPGAQPIAATPYIAIPPNAGQQPNVGGAMDATQLANMQPPPSQM
GPGAAGAVSKSAQKKPVRRGAKPPPDRPVRALFCLALTNPVRKLCIKVVEWKAFEYLILM
TIFANCVALAVYTPYPCSDSNLTNQYLEKIEYVFLVIFTVECVMKIIAYGFVAHPGAYLR
NGWNLLDFTIVVIGMVSTVLTILMKEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILR
AMVPLLHIALLVLFVIIIYAIIGLELFSGKMHKTCRHNITDEIMENPIPCGSGGFQCSQS
YYCSKQFWEGPNYGITNFDNFGLSMLTVFQCITLEGWTDVLYNIEDAMGNSWQWIYFISM
VILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEDDLRGYLDWITQAEDIE
PETDEPKMLQDGKTKQQNEIESTDQLEGDEEGVQQESIYKKKKRDLERVNRRMRRACRKA
VKSQVFYWLIIVLVFLNTGVLATEHYDQPKWLDHFQEITNMFFIVLFSMEMILKMYSLGF
QGYFVSLFNRFDCFVVVGSITEMILTHTHVMPPLGVSVLRCVRLLRVFKVTKYWRSLSNL
VASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFSDMEEKTRHNFDSFWQSLLTV
FQILTGEDWNAVMYIGILAYGGVAGIGVLACVYFIILFICGNYILLNVFLAIAVDNLADA
ESLTAIEKEAEEEEKNKSRSGSPARDEVSGEVGDDGGEGTGGEDEGAGTDLEHDPNETME
DYEAALDTETSEKSEDMNTHKVRLNVESDEEVEEEEEEEDEPEEMQDEEQEVTARPRRMS
EYNTATKKEPIPAGSAFFIFSSTNRFRVFCHWFCNHNYFSNVILICIMISSAMLAAEDPL
STTSERNQILNCFDYFFTAIFTIEICLKMISYGFIIHEGAFCRSAFNLLDLLVVCASLVS
MTVKAGAFSFIKVLRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTSLLQFVF
AVIGVQLFKGKFFYCTDASKMSEEDCQGTYLEFENSNIDKPIVKHREWQQHRFHFDNVAK
AMLTLFTVSTFEGWPSLLEWSIDSNEEKKGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVG
FVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKHRIQYKVWWFVTSQPFEY
TIFTLIMINTVTLAMKFYRQPQVYTDVLDVLNMIFTAVFALEFVFKLAAFRFKNYFGDAW
NVFDFVIVLGSFIDIVYSELKPGSSIISINFFRLFRVMRLVKLLSRGEGIRTLLWTFIKS
FQALPYVALLIIMLFFIYAVIGMQVFGKIAIDDDTAINRNNNFQSFPQAVLVLFRSATGE
AWQEIMMDCSSQPSVKCDSNSDEHNNKTLNNICGSDIAFPYFISFYVLCSFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLC
PHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWK
RTSPKLLDQVVPPPGVDDEVTVGKFYATFLIQDYFRRFKKRKEQEMKDGDRDCHNTVTLQ
AGLRTLHEAGPELKRAISGNLEELLDDNPEPMHRRNHSLFGSVWSSMRKGHHFHRAKSLK
VNSTAAKASPTNSIDFLPYASLRRTAVTDVTRQIAQQIVPNIAGGLSDGAMNQLGTDLRL
AVEENIPLRPLAVFGNPAQQTSYKVVDLQDGIERQLTPPTPPPRRNAPSSSTGTPIIGTV
GAVHTPVVTAAATAATAATAAASAAAGTTSGSSVATTTITTSCTTSANTSTTATSSSPAS
SSNGTNCYYTYASRGCCVDCAVWSNHAIDDCDDEDTSTGSGSSDSGKWNPHSEGGVARGT
TGKPHVTVLGGRSSKHRAKARHDAATAGGKSAPASFRSRDEAAAAATAGAASSSGPGSRT
VANGLKMAQNQAIAVAGFLADVDSRQWRVCASCLSHRASSYHGRERLSHSMPGSPADRKP
NFEVIGSAESLVGRVLVEQGLGKFCDPDFVRYTSREMQEALDMTREEMDQAAHQLLLQER
RGQPLTYELQQGAEQQQLQPWSTQQQTTTGIGYQPLQEQPPSQPVYRQLHSSSYRRSSNR
QQQQQRQSPS
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggggggggatgggggctcggtcttgggcccatctgctcggctgccgggggcc
cagccgattgccgcgaccccctacatcgcaatcccccccaacgccggccagcaacctaac
gtcggtggtgcgatggatgcaacgcaattggcgaacatgcagccgccgccatcgcagatg
ggccccggggccgccggcgctgtctccaaatcggcccagaagaaacccgtcagacggggg
gctaaaccgccacctgatagacccgttcgggcgctcttctgtctggccctcacgaaccct
gttaggaagctatgtatcaaggtcgtcgaatggaaagcctttgaatatctcatccttatg
acgatatttgcaaactgcgtcgcgttggctgtttatacgccgtatccttgtagcgattct
aatctgaccaaccaatatttggagaagatagagtacgtttttcttgtgatttttacggtg
gagtgcgtgatgaagatcatagcttatggcttcgtcgcgcatccaggagcttacctccgt
aatggctggaacttgctggatttcacgatagtcgtgatcggaatggtaagcacggtgttg
acgatacttatgaaggagggtttcgacgtcaaggccttaagggcgtttcgtgttttacgt
cctcttaggctggtttccggtgttccaagtcttcaggtagtcctaaactccattttaagg
gcgatggtaccacttttgcacattgctttgttagttctcttcgtcatcatcatttacgcc
atcatcggcctcgagctattctccgggaaaatgcacaaaacatgccggcacaacataacc
gacgagataatggagaatccgataccatgcggctccggaggcttccagtgcagtcagtcc
tactactgcagcaaacaattttgggagggccctaattacggcatcacaaattttgacaat
tttggactgtccatgctcacggtcttccaatgcattaccctcgaaggctggacggacgtg
ctttacaatatcgaggatgcgatgggaaattcgtggcaatggatatacttcatttcaatg
gtcatcctaggggctttcttcgtgatgaatctaattctcggtgtgttgtccggtgaattt
tctaaggagagagagaaagcaaaggcgcgcggcgacttccacaagctcagggaaaaacag
cagatcgaggacgatcttaggggttacctcgactggataacgcaagccgaggatatcgag
ccagaaaccgatgaaccaaaaatgttacaagatggaaaaactaagcagcaaaatgaaata
gaaagcacagaccaattggagggtgacgaggaaggggtccaacaagagtccatttacaaa
aagaaaaaacgagatttagaaagagtcaacaggcggatgcgaagagcctgtagaaaggct
gtgaagtcccaggtcttctattggctcatcatagttctagtcttcttgaatactggtgtt
ctcgccacagagcactacgatcagccaaaatggttggaccactttcaagaaatcacgaac
atgtttttcatcgtgctgttctccatggagatgatattaaaaatgtacagtttaggcttt
cagggttatttcgtctcgttgttcaatcgtttcgattgcttcgtcgtagtcggttcgatc
accgaaatgatacttacacatacacatgtaatgccgcctcttggcgtttccgtacttcgt
tgcgtccggctgctcagggtattcaaagtaacgaaatattggagatcactgtcgaattta
gtggcctctttattgaactcgatacaatcgattgcctcgctgttgctcctgcttttcctt
ttcatcgtgatcttcgctcttctgggcatgcaggtcttcggtggaaagttcaatttcagt
gatatggaggaaaagacgcgccataattttgatagcttttggcagagtttactcaccgta
tttcagatattaaccggtgaggattggaatgctgtgatgtacatcgggattctagcttat
ggtggcgtcgccggtatcggcgtactcgcctgtgtttatttcattattctcttcatatgc
ggtaattatatcctcttgaacgtgttcttggctatcgccgtcgacaatctcgctgatgca
gagtccctgactgccatcgaaaaggaagccgaggaggaggagaaaaataaatctcgcagc
ggctcgccggcaagggacgaagtcagcggcgaagttggtgatgatggtggtgaggggacc
ggtggagaagacgagggcgccggcacagatctcgaacatgatcctaacgagacaatggag
gactatgaggctgcactcgataccgaaacatcagagaaaagtgaagatatgaatacgcat
aaagtgcgactcaacgttgagtccgacgaagaagttgaagaagaggaagaagaggaagac
gagccagaagaaatgcaagatgaggagcaggaagtgacagctagaccgcgaagaatgtcc
gagtacaatacggccaccaagaaggaaccgatcccggctggttcggcattctttattttt
tcaagcactaataggtttcgtgtgttctgccactggttctgcaatcataattatttcagc
aacgtgatactgatttgcattatgatttcctctgccatgttggccgccgaagacccactg
tcaaccacgtctgagagaaatcagatattgaattgctttgactacttcttcactgctatt
ttcacaatcgaaatctgccttaaaatgatttcatatggcttcattatccatgaaggcgcg
ttttgtcgatcagctttcaatttgctcgatcttctcgtcgtttgcgcttctctcgtttcc
atgacagtcaaagctggcgcattttctttcatcaaagtgctccgagtgctccgtgtactg
aggccgctacgtgccattaatcgcgctaaaggattgaagcacgtagtacagtgcgtcatc
gtagcggtaaagactatcggaaacatagtcctcgtcaccagcctcctgcagttcgtgttc
gccgtcattggcgtacagctctttaagggcaagtttttctattgtaccgatgcatcgaaa
atgtcggaggaagattgtcagggtacttatttggaattcgaaaacagtaatattgacaag
ccgatcgtaaaacatagagagtggcaacaacatcgttttcatttcgataatgttgccaag
gcgatgttgaccctctttacagtctcgactttcgaaggttggccatcactgttagagtgg
tcaatcgactcgaacgaagaaaaaaaaggaccaattcataactttcggccaatagtggcc
gcctattacatcatctacatcattattatcgcattcttcatggtgaacatcttcgtcggt
ttcgttattgtcaccttccagaatgagggcgagcaagagtacaaaaactgcgagctcgat
aaaaatcagagaaattgcatcgagttcgcgttgaaagctaagcctgtgcgccgatatata
ccgaagcatcgaatacaatacaaagtctggtggttcgtcacctcccaaccattcgagtat
acaatattcacgttaattatgatcaacactgtgacactcgcgatgaaattttatcgacaa
ccgcaggtctacacggatgtcctggatgttctcaatatgatcttcaccgctgtgttcgct
ctcgagtttgtgtttaagttggccgcatttcgatttaagaattacttcggcgatgcgtgg
aacgtatttgactttgttatcgtgctcggaagtttcatcgatatcgtttattcggaactt
aaacccggatccagcattatttccattaatttctttagactgtttcgtgtaatgagattg
gtcaagttattgagcagaggggagggtatccgaacacttttatggacgtttatcaagtct
tttcaggccttgccctatgtcgctcttctcattataatgctctttttcatttacgctgta
ataggcatgcaggtctttggaaagatcgcgatagacgacgatacggcgataaatcgcaat
aacaatttccaatcctttccgcaagctgtattggttttgtttagatcagcaacaggtgag
gcgtggcaagaaataatgatggattgttcatcgcaaccaagtgtcaaatgtgattctaac
agcgacgaacacaacaacaagacactcaacaacatctgcgggtcggacattgcatttcct
tacttcatatccttctatgttctctgttcatttctcatcattaaccttttcgtcgccgtt
attatggacaatttcgactacttaacgagagactggtcgattctcgggccgcaccacttg
gacgagtttattcgcctgtggtccgagtatgatcccgacgctaagggtcgaattaaacat
ctcgacgtggtaacgttactaaggaaaatatcgccacccttgggtttcggaaagttgtgt
ccccatagggtagcttgcaagagactcgtctcaatgaacatgccgctcaacagtgacggc
actgtattgttcaacgcgactttatttgccgtcgtgagaacttcactaaggataaagacg
gagggcaacattgatgacgcaaatgccgaacttagggcggtaatcaagaagatctggaag
aggactagtccaaagcttttagatcaagttgtaccaccacctggagtggacgacgaggtg
acggtcggtaaattttacgcgaccttccttattcaggattatttccgtcgattcaagaaa
cgtaaagaacaggaaatgaaggacggtgatagagattgtcacaacaccgtgactcttcaa
gccgggttgagaacgttacacgaagctggccctgaattaaaacgcgcgatttccggtaat
ttagaagaactcctcgacgacaatccggaacctatgcacagaagaaatcactcgctcttt
ggcagcgtatggtccagcatgcgaaaaggacaccactttcatagagcgaaatcgctgaag
gttaattctaccgctgcgaaggcttctccgaccaattccatagattttctaccgtatgcc
tcgttacggagaaccgccgtcacggatgtcaccagacaaatcgctcagcaaattgtgcca
aatatagcaggtggtttaagcgatggcgcgatgaatcagttgggaactgatttgcgactg
gcagtcgaagagaatatacctctaagaccactcgctgtcttcggtaatccggcacaacaa
acgtcttacaaagtggtcgatcttcaggacggaatcgagcggcagttgacgccacccacg
cctccaccgcgacggaacgcaccgtcctcgtccaccggtactccgatcatcggcaccgtc
ggcgccgtgcacacccctgtcgtcacagcggcagcaacggcagcgacggcagccaccgca
gcagcatctgcggcggccggcacgacgagcgggtcgagcgtcgcgacgacgacgatcacc
acgtcgtgtaccacgagcgcgaacacctcgaccaccgcgacgagctcaagccccgcttcc
tcgtcaaacgggacgaactgttattatacctacgcgtcgcgaggctgctgcgtcgattgc
gcagtctggagcaatcacgccatagacgactgtgacgatgaggacacgtcaaccggaagc
ggatcgagtgattccggcaagtggaacccgcactcggagggtggcgtggcgcgaggcacg
acagggaaaccccatgtcaccgtgttgggcggccggtcgtcgaagcaccgggctaaggcc
cgtcatgatgctgcgaccgccggtggcaagtcggctccagcgagcttccggtcgcgggat
gaagccgctgcagccgccacggccggtgccgcttcgtcgtcaggtcctggctcgcgcact
gtcgccaatggccttaaaatggcacagaaccaagcgatcgccgtggccggcttcctcgcc
gatgtcgattcgcgacaatggcgcgtctgcgcctcctgcttgtcacaccgagcgtcatcc
taccacggcagagagcgcctgtcccacagtatgcccggcagtcctgcggatcggaagccg
aactttgaggtcattggaagcgcggaaagcctcgttggacgggtcctggtggaacaaggt
ctgggcaaattctgtgatccggatttcgtacgatacacgtcgcgtgagatgcaagaggcg
ttggacatgacgcgcgaggagatggatcaggcagctcatcagttactccttcaggagcga
cgtggtcagccattgacctatgagttacagcagggcgcggagcagcaacagctgcagccg
tggagcacccaacaacagaccacaaccggtatcggttatcaaccattacaggaacagcca
ccgagtcagccggtctatcgccagctgcactcttccagctaccgtcgcagtagtaaccga
caacaacagcaacagcgacaatcgccgtcctag
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integrated database retrieval system
