Atta colombica: 108684295
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Entry
108684295 CDS
T11098
Name
(RefSeq) uncharacterized protein LOC108684295 isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
acoc Atta colombica
Pathway
acoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108684295
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
acoc01007
]
108684295
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoc03016
]
108684295
Enzymes [BR:
acoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
108684295
Amino acid related enzymes [BR:
acoc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108684295
Transfer RNA biogenesis [BR:
acoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108684295
Prokaryotic type
108684295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
108684295
NCBI-ProteinID:
XP_018044036
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MDIEKNGFCKPSSLEGRLRLRKNDKESMDNKVLPNNNESNTDDTACTSQSPLDDSILDFK
SPKRIHSMQSKIINSNRFPDKVKKKVLHSKPKIIINEKKSKSGKPLQSKKIRDIQQPLIE
SSFFKSEKKEIESPQSSTVVQTAFVCPLCFKNLKDENSQAVHMKSCATKNNMSTKKLMDA
VELQERQAAERKSLGLLSAPILQDKKKSAPRKIASLDDPDLQLALALSKSLYEKEEMEKW
DEVQIVAISSNPSVSDNNAECPQKATLQNFGFSSSRNVLPTNNLPTSRTKKRKPIEPTIL
QRRTALERERILTERIAEILMDCKDFTQRSQEKVEESNGVKEKIDIKSQLLQQLRQIENT
LWDRTKLILTKDIFYVKQLLPQIIPLEKKEQKSNEEKNAIKLMELNINNENSLNNEQMQE
IKDIQDVIKTMDTNEALTISSNINICCKEKQFLDNLATNWRNILNDSFASDIIVFVRNSK
HIWTHKLVFYTRCANILLDVISNDTEFSTAKEKICWLDTDYNVAMAFLEFIYCGIIDKYS
KILDSQITLSGIRALGRKYKINDLFVYLRQKKSKSTAEVKHNCNTYEKSTENVHPNIETT
FDVSKLNKSFNKSPNCTHNVVKNIPCSQKTLLEGVNDDLYLLENNYAAAKNEYILQDEKD
TSLKLSEEMNFKSNTLAKRETSVSPDMFDETFVMKHNDKSTVHSKDLEDSNIHILLNLLK
QDADVDICNQKLSTAKPQNTKHLKLDRSTSICLKNLEQSVEINPVESNSLKFSINDMHNN
FLMDISQNNISECSQDFSKIIKQKSNITLFIEEIQKENAESDALINATEMECSVQISSIK
HKNPFCIDKYDNSNLQPYDNDEQSVDTEKKPSRLSIIEQCMQSYAAKNPEFYSRLSNEDV
KDVKQTNNSHIDSLLSKKITESSHNNILNCTQNFTLSDERNVSEQVTTVPIVCSQHTETM
NRSLSETIFDLETNEKEISMYSKYMRDHKDNSIAKYRRAISRNKSDNNLSNKSILSDFLN
EDSNVNKAEKDEILTQSVLTQKDVDVIVSSDSDVESTSSNVSHILENNDSSCENIMSHSL
QQSKKEIEKNKKDMTNEKNSQSFEINKFSKAMTTYLEEKKNINSAKLNPDKLNTTEIMTQ
KYKFNELNDAQKKESIPSPIMVSSSPDFLNNESCSPILHMEDLLQGKLCTENVSGLEACK
LRKSTTFSFDFEDDIYLANVDIDKYEKQHILEKSRSFNISSIRKFNNSSTRKSNDKNNHG
NIKGRDIAANYCGNLDNNVTSLTQNFTSVKKFKKKSLSEGQINTNRLRNQGVSKQFQCNY
IQNIGNAKMLKITDKDVTPPPIYNDMSTPELHKEMKKYGLKVQKRSRAVKLLTHIYNELH
PLMPEKTIEQQVTEISSDENEEPPLKKRNVDDNSFEKLSNSEDSENELLCSQDSNDSISP
TKETLNKEMEFYETESSSVLENSSNITEAFMKLINIDKALHNKILQYEPVNIDHLRCMLQ
THGFKCNLPNLMNFLDQQVRFLYYILFTRTECQENSQKSIIHQYLQFLYN
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaaaagaatggattctgtaaacctagtagtttagaaggaagattgagatta
aggaaaaatgataaggaaagtatggataacaaggtccttcctaacaataatgaatctaat
acggatgatactgcttgtacatctcaatctccacttgatgacagtatattggattttaaa
tcgccaaaaagaatacattccatgcaatcgaaaattattaatagtaacagatttccagat
aaagtcaaaaagaaagtactccattctaaacctaaaattattataaatgaaaagaaatct
aaaagtggaaaaccattacagagtaaaaagattcgtgatatacaacaaccattaattgaa
tcatctttttttaaatctgaaaagaaagaaatagagtcaccgcaaagttcaactgttgta
caaactgcttttgtatgtccattgtgttttaaaaatcttaaagatgaaaattcacaagct
gtacatatgaagagttgtgccacgaaaaataacatgtctacaaaaaaattaatggatgct
gtggaattacaagaacggcaagctgcagaaagaaaatcattggggcttctctccgctcct
atattacaagacaaaaagaaatctgctcctcgtaaaatagcatcgcttgatgatcctgat
cttcaacttgctttagccctttccaaatctctatatgaaaaagaggaaatggaaaaatgg
gatgaagttcagatcgtagcaatatcctctaatccatcagtatcagataataatgcagaa
tgtcctcagaaagcaacattgcaaaattttgggtttagtagcagtagaaatgtattacca
acaaacaatttgcccaccagtagaactaagaaaagaaagcctattgaaccaaccattttg
caaagacgtacagctctagaaagagaacgtattttaacagagagaatagctgagatactt
atggattgtaaagattttactcaaagatctcaggaaaaagtagaagagtctaatggcgtt
aaagagaagattgacataaagagtcaattacttcaacaattacgtcaaattgagaataca
ttgtgggatagaacaaaactaattctaactaaagatatattttatgtaaaacaactattg
cctcaaataataccattagaaaagaaagagcagaaatcaaatgaagagaagaatgctata
aagcttatggaattaaacataaacaacgaaaattctttaaataatgaacaaatgcaagaa
ataaaagatatacaggacgttataaaaacaatggacactaatgaagcattaacgatttct
tcaaatattaatatatgttgtaaagaaaagcaatttcttgacaatttagctacaaattgg
agaaatatactaaatgatagttttgcaagtgatattattgtgttcgttagaaatagcaaa
cacatatggacgcataagttggttttctatacacgttgcgcaaatattttacttgatgta
atatctaatgatacagagttctctactgcaaaagaaaaaatttgttggcttgatacagac
tataatgtcgccatggcctttttagaatttatttattgtggtataatcgataagtattca
aaaatacttgattctcagataactttatctggtattagagctttaggaaggaaatacaaa
ataaacgatttatttgtttatttgcgtcaaaagaaatctaaatctacagcagaagttaaa
cataattgtaatacttatgaaaaaagtacagaaaatgtacatccaaatatagaaacaact
tttgatgtttcaaaattaaataaatctttcaacaaatcaccaaattgtacgcataatgtt
gtgaaaaacattccatgctctcagaaaacactattagagggtgttaatgatgatttatac
cttcttgaaaataattacgcagctgcaaagaacgagtacattttgcaagacgaaaaagat
acttcactgaaattatcagaggaaatgaatttcaagagcaacacactggcaaaacgagaa
actagtgtatctcctgacatgtttgatgaaacatttgtgatgaagcacaatgataaatct
acagtacactctaaagatttggaagattctaatatccatatattactgaatttgctcaaa
caagatgcagatgttgatatctgtaatcaaaaattatcaactgcaaaaccccagaataca
aaacatttaaagttagatagaagtacatctatttgtttgaaaaatttggaacaaagtgta
gaaattaatccagtcgaatcaaattctctgaaattttctatcaatgatatgcataacaat
tttttaatggatatatcccaaaacaatatatctgaatgtagtcaggatttttcaaagata
ataaaacagaaaagtaatatcacattatttatcgaagaaatccagaaagaaaacgcggaa
tcggatgcgttgataaatgccacagagatggaatgttctgtacaaatatcttctataaag
cataagaatccattttgtatagataaatacgataactccaatcttcaaccttatgataat
gatgaacaatcagttgatacagagaaaaaacccagtagattatctataatagagcagtgt
atgcagtcatatgctgccaaaaatccagaattttattctcgtctttctaatgaagatgta
aaagatgttaaacagactaataattcgcacatagattctctattatctaaaaagataaca
gaatcttcccataataatatattgaattgtacacaaaactttactttatcagatgagaga
aatgtttcagaacaagtcacaactgtaccgatagtatgttcacaacatactgaaacaatg
aatcgatcgcttagcgaaacaatttttgatttagaaacgaatgagaaagagatttctatg
tattctaaatatatgagagatcacaaggacaatagcatagcaaagtatcgaagagcaatc
agtagaaataagtcagataataatctatctaataaaagtatattatctgatttcctcaat
gaagacagtaatgttaataaggctgaaaaagatgaaattttgactcaatctgttttgaca
caaaaagatgtagatgtaattgtttcatcagattcagatgttgaaagtacatcttccaat
gttagccatatcttagagaacaatgactccagctgtgaaaatatcatgtctcattctctg
caacaatctaaaaaagaaatagaaaaaaacaaaaaggatatgacaaatgaaaaaaacagt
caatccttcgaaattaacaaattttcaaaagcaatgacgacatacttggaagaaaaaaaa
aatattaatagcgcaaaattaaatccagataagttaaatactacagagataatgacacaa
aaatataaatttaatgaattaaatgatgctcagaaaaaggagtctataccaagtccgatc
atggtatcttctagcccagattttttaaataatgaaagctgcagtccaattctacatatg
gaagacttgcttcaaggtaaactttgtaccgaaaatgtatcaggattagaggcttgtaaa
ttaagaaagtcaaccactttttcttttgattttgaagacgatatatatcttgcaaatgtt
gatattgataaatatgagaaacaacatattttggagaagagtcgatcatttaacatatca
agtataagaaaatttaataatagtagtacacgcaaaagcaatgataaaaataatcatgga
aatatcaaagggagagatatagcagcaaattattgtggaaacttagataataatgttaca
tctttgactcaaaattttacaagtgttaagaaatttaaaaagaaatctttatccgaggga
cagattaacacaaatagattacgtaatcaaggagtgtccaaacaatttcaatgtaattac
atccagaacattggaaatgcaaaaatgcttaaaataactgataaagatgttacacctccg
cctatttacaacgatatgagtactcctgaattacacaaagagatgaagaaatatggatta
aaggtacaaaaacgtagcagagctgtaaaattattaacgcatatttataatgaacttcat
cctttaatgcctgagaaaacaatagaacaacaggtcactgaaatttcgagcgatgaaaat
gaggaacctccattgaagaaacgaaacgtagatgataacagtttcgaaaaattgagcaat
tcagaagacagtgaaaatgaattgctttgttctcaagatagcaatgatagtataagccct
acaaaagaaacactcaacaaagaaatggaattttatgaaaccgagtcatcatcggtactg
gaaaattcatcgaatattacagaagcctttatgaaactaatcaatattgataaagcttta
cataataaaatattacaatatgagccagtgaatattgatcatttgcgttgtatgttgcaa
acacatggatttaaatgcaatttgcctaatctcatgaactttctagatcaacaggtgcgt
tttctttattacattttattcaccagaacagaatgccaagagaactcgcagaaaagcata
attcatcaatatttacaatttctttataattaa
DBGET
integrated database retrieval system
