Atta colombica: 108684337 Help Entry 108684337         CDS       T11098                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism acoc  Atta colombica Pathway acoc03018   RNA degradation Brite KEGG Orthology (KO) [BR:acoc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108684337  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acoc03019]     108684337 Enzymes [BR:acoc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      108684337 Messenger RNA biogenesis [BR:acoc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      108684337   mRNA degradation factors    3'-5' decay     Ski complex      108684337 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C ResIII DEXQc_Suv3 MTR4_beta-barrel ATPase_2 nSTAND3 DUF3067 PhoH DUF3516 Motif Other DBs NCBI-GeneID:  108684337 NCBI-ProteinID:  XP_018044093 UniProt:  A0A151I5F7 LinkDB All DBs Position Unknown AA seq 1209 aa AA seqDB search MESTQLFAEPPPIWPDIRSELRQYIECPERLPIHQLDNTQCYWPRKADVLSLLEFDLAPV NTTLKFDRDPITGKIGEIQEIDLQGAGETARNSMSMTRAPGLLTDGVRGNPSNIPFWPGG FEEPKIPKNEDMDDIDFEKDLRTLAKGFSSGLEFKSDNCTPINCMRYEVEASILEETEKL IINNDNINLMAVIHEEGNLLGSWPSIEEPKKESVQIVDNNIPFIDNSILSKETDIPVLKI SETQTELTKAEWAEQLDVSAPVTDFNKRIPDPAITFNYELDTFQKQAILKLEENSNVFVA AHTSAGKTTVAEYAIALSQKHMTRVIYTSPIKALSNQKYRDFKRKFESVGLLTGDLQINQ TASCLIMTTEILQSMLYCASDVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQNINIV MLSATVPNPIIFADWVGRIKKRKMYVISTLKRPIPLLHYLYTGTDGKTKDDKFLVLDSNS QFLLDGWYKATNASDKKKDKTSKDCRRKIQMTPKQEEVLWRAFVSHLQNNDMLPVVVFTL SRKRCDMNAVTFRNLDLTTAREKHQVHVFFQHNIKHLKGSDRELPQVLMMQELLEKGVGI HHSGILPILREIVEMLFQSGVVKLLFATETFAMGVNMPARTVVFDSIRKYDGNNFRTLFP TEYIQMAGRAGRRGHDTTGTVIVMCRHDVPHFNDLKPMMCGEPQTLESKFKVTYSMLLNL RRVNESVTVEAMMRKSFKESPLASQEASYNNELRKIERELSNLPPLTEIQKKLSTFYHQA VDYLEDVKFLNSYLLTSKKATKSLIEGRILLISYADHYNKLALLLQVLHHKSSAQYKVLI LKDANVSTSETTDFKSSQIFEKWCEIISLTKKEIFVPSINPSHEVLTLFPWHILKITNCQ IKIDCSLILNDWEKRQISRFKNDPPGQTCQTAVQELTSLSFNASTNARILQPYIEPSSKN DFQLRIQHRNKLKANLNDMKCIEIPNFEEQFRPVFERNHLEDKKRQLQLKLSDEGMALYP DYLNMVALLKHFRYIDNDERVALKGRVALQMGSNELLITELILKNVLTVLQPAEIAALLS ALIFQQRTDVEPQLTPTLANACKIMNEVHAELEHLEQYYQLSTLLPLNFGLVEVVYEWAQ AKSFAEIMKMTDVQEGIIVRCIQQLGETLRDVKNAAVTIGDPILKEKMEEASTAIKRDIV FAASLYTQD NT seq 3630 nt NT seq  +upstreamnt  +downstreamnt atggaatcgacgcagttatttgctgagcctccacctatttggcctgatattagatcagaa ctgcgacaatatattgaatgccctgaacgattacctatacatcaactggacaatacccaa tgttattggccacgtaaagcagatgtcctttccttgctagaatttgatttagctcccgtt aataccacgcttaaatttgaccgtgatccaataacaggcaagattggtgagatacaagaa attgacttacaaggtgcaggggaaacggcaagaaattctatgtctatgactcgtgcccct ggattacttacagatggagttcgaggtaatcctagcaatattccattttggcctggtggt tttgaagaacctaaaatacctaaaaatgaagacatggatgatatcgactttgagaaggat ttaaggacattagccaaaggctttagctcaggtttagaatttaaaagtgacaattgtaca ccaatcaattgcatgagatacgaagtagaagcttcaatattagaagaaactgaaaaatta ataatcaataatgataatataaatttaatggctgttatacatgaggagggaaatttgctt ggttcatggccttcaattgaagagccgaaaaaagaaagtgttcaaattgtggataacaac attccctttatagacaattccattttatccaaagaaacagatatacctgtcttgaaaata tccgagacgcaaacagaacttacaaaggcagaatgggcagagcaactggatgtatctgca ccagtaacagattttaacaagagaatacctgatccagcaattacattcaattatgaacta gatacttttcaaaagcaagctattcttaaattggaagagaacagcaatgtcttcgttgct gcacatacatcagcaggaaaaactactgttgctgaatatgccattgcattgagtcaaaag catatgacaagagtgatttatacatcccccataaaagctctgtcaaatcagaaatatcgt gattttaaaagaaaatttgaaagtgttggattattaacaggtgatttgcaaataaatcaa actgcttcatgtctaatcatgacaacagagatcctacaatcaatgttgtattgtgcatcc gatgttttacgagatttagagttcgtcatatttgatgaagtgcattatataaataatgaa gataggggtcatgtatgggaagaaatagttattcttttaccacagaatattaatatagta atgttatctgcgactgtaccaaatccaataatattcgcggattgggttggtcgcatcaaa aagcgaaaaatgtatgtgattagcactttgaaaagaccaatacctctgttacattacttg tatactggcactgatggcaagactaaggatgataagttcttagttcttgatagcaacagt caatttttattggatggatggtacaaagcgacaaatgcatccgataaaaagaaagacaaa acttcaaaggactgtaggagaaaaattcagatgacaccgaaacaagaagaagtattatgg agagcatttgtaagccatcttcagaacaatgatatgttacccgttgtcgtatttactcta tcgaggaaacgctgtgatatgaatgctgtcacattcagaaatctcgatttaacgaccgcg agagaaaagcatcaagtacatgtattttttcaacataatataaaacatctaaaaggtagt gacagagaattaccacaagtacttatgatgcaagaactcttggaaaagggtgtgggtata caccacagtgggatattaccaattttgagagagatcgtagaaatgttatttcaaagtgga gttgtcaagttactatttgcgacagaaacttttgccatgggagttaacatgccggcgcgc acagtggtgtttgattccatacgaaaatatgacggaaacaactttcgtactttatttcca actgaatatatacaaatggctggccgtgccggacgacgaggtcacgacactacgggtact gttatagtgatgtgcagacacgacgtgccgcactttaatgacttgaaacctatgatgtgt ggtgaaccgcagacattggaatcgaaatttaaagtcacatactctatgcttcttaatcta agaagagtgaacgaatccgttaccgttgaagcgatgatgcgcaaatctttcaaggaatcg ccgttagcctcgcaagaagcgtcatataacaacgagttacgaaaaatcgaacgcgaatta tcgaatttaccgcctttgaccgaaatccaaaaaaaactctctacgttctatcatcaagcg gtcgattatttagaagatgttaaatttctgaattcttatttgctcacctcaaagaaggca acgaaaagtttaattgagggcagaattttgttaatatcatacgcggatcattacaataaa ctagccttgttattgcaagttttacatcataaaagctctgcccagtacaaagtcttgata cttaaggacgcgaatgtatccacttccgaaactactgattttaaaagttctcagatattc gagaagtggtgcgagattattagcttaacgaaaaaggagatatttgtaccaagtattaat ccgtcacacgaagttttgactctgtttccatggcatatattaaaaataactaattgtcag ataaaaattgactgctctttgatattgaatgattgggaaaagaggcaaatctcacgattc aaaaacgatccaccaggacaaacgtgtcagacagcggttcaagaattgacttctttatca tttaatgcttctactaatgctcgcattctacaaccatatatcgagccttcatcgaaaaat gattttcaattaagaatacaacatagaaacaaattaaaagctaatctgaatgacatgaaa tgtatagaaataccaaactttgaagaacaatttagacctgtatttgaacgaaatcatctt gaagataaaaaacgacagcttcaacttaaactcagcgatgaaggaatggcgttatatccg gattatctgaatatggtagcactcctcaaacactttaggtacatagataatgatgaaaga gtcgccctcaaagggagagtcgcgctgcaaatgggtagtaacgaactgctaataacagaa ttgattctaaaaaatgtgttaactgttctacaaccggcagaaatagcagcgttactatca gcactaatctttcagcaacgcacggatgttgagcctcaactcacaccaactcttgctaat gcttgcaagataatgaacgaggtgcacgcggaattggaacatctagagcaatactatcaa ctatcgacattactaccactgaattttggcttagtggaagttgtctatgaatgggcacag gccaaatcatttgccgagatcatgaagatgactgatgtccaagaaggaattatagtccgt tgcatacagcaattaggcgaaacattacgagatgttaaaaatgcagctgtaactataggt gacccgattttaaaagagaagatggaggaagcgtcaaccgcgattaaacgtgacatagta tttgctgcgtccttatatacccaagactga

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