Atta colombica: 108684350
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Entry
108684350 CDS
T11098
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
acoc Atta colombica
Pathway
acoc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108684350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoc04515
]
108684350
Cell adhesion molecules [BR:
acoc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
108684350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
C2-set_2
Ig_Rha78A_N
C2-set_3
NDNF
fn3_2
Ig_J
Ig_C17orf99
Fn3_Dep-1_3rd
C1-set
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108684350
NCBI-ProteinID:
XP_018044105
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MEPRPFTILLALLLTTLARINAGGLDFTIEPRDVVVEQGGSASLDCEAKSVLGTPSIQWR
TDDGQPITFIGDSYRSQLANGSLYINSVYAGSAELIGSYQCLASIDNVGAIVSRTATIKL
ASLPGFEREPQDTMVYAGQIAYLSCALPASSSLLKIQWLKNEHPLVLEESRMTILPSGAL
EIDNVQYHDVGSYRCNASGYGQYRLSNKAQLGLLSSDIDEGSSAPVFVAQPLQQIVTEGS
DVTLECAANGYPKPSIFWLKDGVALDSTTQDSRYHKVAASSLMITNVRESDHGSYQCRAE
NMVDSLDAVAELIVQVPPKFIKKPEDKIASESQDLEFECEIYGKPEPKITWLKNGERITL
SAYWQIVNGYNLRINGLLPIDAGIFQCMGMNPAGSVQASARLTINQPKRTNLYRTTPKTI
PKKKLLLHRQLYNKTWQHPSTLLGHTFSSNMPSPPLSISPSDDPADLLPNSFKYPNPLYD
PNSRFVDDTDTLEAFDGGGIPSPPRNLSLVIVTARFVTLRWQEPENANSDALNYFVYYKQ
EGAMRERVANSLQKLEAMIRGLQPGMTYQFHVVAQNSRGTSAPSEILQVTTLIEANVPGF
PMNLEGQPTSSMSITLSWEEPQVINGRISKYIITFMEGDGEEITRETTSTTYELVDLVPY
TEYSIRVQAVNENGPGAFSKDIVIRTYSAQPTQPPHNVTLEAASSTSIIIRWEPPLEGQN
GIITGYRIRYRRYPHDSRSGDRRSPITVTTEGNQRLYVLTGLEKHVVYQVRICAFNVNGT
GPWTEWTKIETYENDLDETKVPNAPSNLRANAMADSILVSWHPPKDQSIKVRKYKLGWGK
GYPDVEIQVLDGKQRSYAIKPIEPTMEYVISLRATNNVGDGQPAYANVRTPERFVSESAV
PLIPPVGLKAIVLSASTVVLYWTDTTLSKSQYITDSRYYVVRYTFYHHSSSPRYRYYNAT
DLNCMIHDLKPNTQYEFTVKLVKGKRSSPWSMVVLNQTQEAAPSTAPRDLIIQTIEDRPT
SVLLRWQPPKQPNGQITGYLIIYSTDNTKWDRDWLVEGVIGDKVDAVVKGLHPNTAYYFK
IQARNSKGYGPFSTTVSFKTPPNNGMDDELHDRDGRSFSNLLIYIIVGLSIVFVTAISVV
IVVCCKCNPSSPDHKKGYMKDSSNQKTNIKPPDLWIHHDQMELKALEKSSLNGEASTSGV
TSNTLPRSGNQEYNQDNIHGNSSSLDKRTYVPSYMGNTDEKCSTLNRQHSRGSHKSKLIT
LPIDSAPLHQPIATATPIVNSSMSQPTIHTSCSDTSSVRQNYPRTVAQYSLNRAHVTLEP
TPESSPDSCIPSSYEPLQNQLPYGGTSGQSYSGNTQYASGHYGNNTQPMSSAVGENNTSK
RLQGHPLKSFSVPAPPPQSAPSTPAQQKHGVSHVTVRPTMSGSPYKKSQGSSSQLTKNRL
ASVSNPAHTSEELERLKPSYSTEELNQEMANLEGLMKDLNAITASEFEC
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgtcctttcaccatcctgctggctttgttgttgacaacgctcgcacgaatt
aatgcgggaggcttggactttaccattgagccgcgggatgtggtggtggaacagggaggt
tctgcgagcctggattgcgaggcaaagagtgtcctcgggacaccgagtatacaatggcgc
acggatgacggacagccaattacttttatcggagatagttatcgatcacagctagcaaat
gggtccttgtacataaatagcgtatacgctggtagtgcagaattaattggaagttatcaa
tgcttagcatccatagacaatgtcggagcgattgtctctcggacagccacaatcaaatta
gcaagtctccctggcttcgaaagagaacctcaagacaccatggtttatgcgggacagatt
gcatatttgagttgtgcgttaccggcttcttcgagtttgttaaaaatacaatggttaaaa
aacgaacatcctttagtacttgaagaaagtcgaatgacaatcttgccttcaggcgcattg
gaaatcgacaatgttcaatatcacgatgtgggatcgtacagatgtaacgctagtggctat
ggtcaatacagactgagtaataaagcacaattaggattattatctagtgatattgatgag
ggttctagtgctccagtattcgttgcacaacccttgcaacaaatagttaccgagggatcc
gatgtgaccttggaatgtgctgccaacggctatccgaaaccgtcgattttttggcttaaa
gacggcgtcgctctcgattcgacgacgcaagactctagatatcacaaagtcgcagcctct
agtctcatgatcacgaatgtcagagaatcggatcatggttcgtatcaatgtcgcgcggaa
aatatggtcgattctctggacgcagttgccgaattaatcgtacaagttccaccgaagttt
ataaagaagccggaggataaaatagcgagtgaaagtcaagatctagaattcgaatgcgaa
atctatggaaaaccagaaccaaaaattacttggctaaagaatggcgagcgtattacatta
agtgcatattggcaaattgtcaatggatacaatctgagaattaatggactattacccata
gatgctggaattttccagtgcatgggaatgaatcctgctggtagtgttcaagcttcagca
cgtcttacaatcaaccagcccaagagaacgaatctctatagaacaactcccaagacaatt
cctaagaaaaaattattattacaccgacagttgtataataaaacgtggcaacatcccagt
actctcctaggacacacgttctcgtcgaatatgccgagtcctccgctttcgataagtcct
tctgatgatcctgcggatcttcttccgaactcgtttaagtatcctaatcccctttacgat
ccaaattcccgttttgtagatgatacagataccttagaagcattcgacgggggtggcata
ccctctccaccgaggaacttgagtcttgtcatcgttaccgcgagattcgttacgctacgc
tggcaagagccagaaaatgcaaacagcgatgctctcaattatttcgtatattataaacag
gaaggggccatgagggagagagttgccaactcgctgcagaaactagaagccatgatacgc
ggtttgcaaccgggtatgacgtatcaattccatgtagttgcgcaaaattctcgaggaacc
agtgctcctagtgaaatattacaagttacaacgctaatagaggccaatgttcctggattt
ccgatgaacctggaaggtcaaccaacaagcagcatgagtattaccttatcgtgggaggag
ccccaagttattaacggtcgaatatctaaatatataattacatttatggagggcgatggt
gaggaaataacgcgtgaaactaccagtacaacatatgaattggtagatcttgtgccttat
acggaatacagtattagagttcaagcagtcaacgaaaatggcccgggcgcatttagtaag
gatatcgttatacggacttacagcgcacaaccgacgcaaccaccgcataacgttacttta
gaagcagctagttcaacgagtattattataagatgggaacctccactcgagggacagaat
gggatcatcacaggttatagaatacgctaccgtagatatccgcacgattctcgatctggg
gatcggcgatccccgatcacggtaacaactgaaggaaatcaacgtttgtatgtgctcact
gggctcgagaagcacgttgtgtatcaagtccgcatatgtgccttcaacgtcaatggaact
gggccttggacagaatggacgaaaatagagacatacgagaatgatttggatgagacgaag
gtacctaatgcacccagtaatctgagagcaaatgctatggcggattctatattagtgtca
tggcatcccccgaaagatcaaagcatcaaagtgagaaagtataaattaggctggggcaaa
ggttaccctgatgtcgagatacaagttcttgatggaaaacaacgctcttatgctattaag
cctatagaaccaacaatggaatatgtaatatctctaagagcaacgaataatgttggtgat
ggtcaaccagcatacgcaaacgtaaggactcccgaacgttttgtatctgaatctgcagtg
cctttaataccacccgttggccttaaagctatcgtactgtcggcttctaccgttgtgctg
tattggacagacactactttatcgaaaagtcaatatatcaccgatagtcgatactacgtg
gtgcgttatacattctaccatcacagcagtagcccacgatacagatattataatgctact
gatctcaactgtatgattcacgacttaaagcccaatacgcagtatgagtttacagttaaa
ttggtcaagggtaaacgaagttcaccgtggagtatggtcgttctaaatcaaactcaagag
gctgcacctagtacggcacctagagatcttattattcaaaccatcgaagatcgtccaacc
tctgttctattgcgatggcaacctcctaaacaacccaacggacaaatcacaggatatctc
ataatttattccactgataacacgaaatgggatcgtgattggctagtcgaaggtgtcatc
ggagacaaagtggatgccgttgtgaagggtttgcatcctaatacggcatattactttaaa
atccaagctcgtaactccaaaggatatggaccattctctacgacggtttcatttaaaacg
ccaccaaacaatggcatggatgatgaattgcatgatcgagatggacgaagtttctctaat
ctattgatttatatcatagtcggtctttcgatcgtctttgtcactgctatatcagtagtg
attgtagtgtgctgtaaatgtaatccaagttcgccagatcataagaaaggatacatgaaa
gattcatcaaatcagaaaacaaatattaagccaccagatttgtggattcatcacgatcaa
atggagctgaaagcacttgagaaatcttcgttaaatggcgaagcctccaccagtggcgtc
accagtaatacattacctagatcgggcaatcaggaatacaatcaagataatatacatggg
aattccagttcgctggataaacgtacttacgtgccaagttatatgggtaacactgatgag
aagtgctcgaccctgaacagacagcacagtcgtggaagccacaaatctaaattaattaca
ctccccattgacagtgcacctttgcatcagcctatagccacggctacgccgattgtgaat
agcagcatgtcgcagccaaccattcatacctcgtgtagcgatacatcgtcggtgagacag
aactatccgcgaaccgtcgcgcaatacagcttaaatcgcgcgcacgttacgttggaacca
acccctgaatccagcccggattcttgcatacctagttcatacgagccattacagaatcag
ctgccatatggtggtacgagtggacagtcgtacagtggaaacactcaatatgcttctggt
cattatggcaataacactcaaccgatgagcagcgccgttggggagaacaacacaagcaaa
cggttgcaaggacatcccttgaaaagcttcagcgtaccggctcctccgccgcagagtgct
ccttcaacaccagcgcaacagaagcatggtgtgtcacatgtgacagtaagaccaacaatg
tccgggagtccgtataagaaatcacaaggttcgtcatcacaattaacgaagaatcgctta
gcttctgtgtcaaatccggcacatacttcggaggaacttgaacgattaaagccttcatat
agcaccgaagaattaaatcaggaaatggccaacttagaaggtcttatgaaagatctaaat
gccataacagcatcggaatttgaatgctaa
DBGET
integrated database retrieval system
