KEGG   Atta colombica: 108684374
Entry
108684374         CDS       T11098                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
acoc  Atta colombica
Pathway
acoc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108684374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acoc03009]
    108684374
Ribosome biogenesis [BR:acoc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108684374
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WDR55 Utp13 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 VPS8_N Beta-prop_WDR75_2nd RAB3GAP2_N Beta-prop_DCAF12 Beta-prop_VPS8 PSI_PlexinA-B
Other DBs
NCBI-GeneID: 108684374
NCBI-ProteinID: XP_018044138
LinkDB
Position
Unknown
AA seq 799 aa
MSKANLKEAFEVESKYGAFYTGGNVQWSANAEYLFCQKGGTVSILSMSKGSVISSLCITE
ADQLEDTINCFALCNEDTGIITHHKSGLFKLWDWKTNKLMKLWKSIHKGPVMQITLSNNS
ILMASGGSDGSVRLWNLQHHACTHNFKGIQGVVSVLEFYSNNEKSLLFGAGDNTKIYGWD
IITGQEKIILSGHFSKVTSLSFHENGNYLVSSGRDRVLILWDISTGTSIRVLPVYEGIEG
IFIISAKCLPVFITSRKSDGIYVASAGEKGVVKIWEMKTGKQIYVQDDPLVPPSKEEGGL
SITHLLYNSISNIFAVVSVDHNIIVHSMELFECKKQLVGYSDEILDVAYLGDNDSHIALA
TNSCDIKLYEIASMNCQLLCGHTDSILALATTLVNVNLLLSSAKDNSVRVWLLDKDTMRM
SCIGHAVRHTASISSIAISQTLPKFFTTVAQDSCLKLWELPNNLESHNQDLSLNVRHTIL
AHQKDINCVTISPNDKLIATASQDKTAKLWYAENLQLVGVLHGHRRGVWCVRFSPIDQVL
LTTSADCTMKLWSLTELNCLKTFEGHESSVLRGEFLSCGMQLITSGGDGLLKLWNIKTSE
CISTLNQHESHVWTLAVTKDQKHMISGGSDSLLVIWRDVTEERKAQAASEKAQFVLEEQR
LANLLKAEELQAALKLALKLERPLQVLKIIEAISKKTNNEFTEIIKELKPYHKETLLKCA
VTWNMNSRNSLAAQVIINALITEIGTQELQTPNLSSTLEVMMPYTDRHFKRLTKLLQDLY
LLTYTFNRMKPDIISIGTK
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgagcaaagctaatcttaaggaagcatttgaggtagagtctaaatatggagcgttttat
actggcggcaatgtacaatggagtgcaaatgcagaatacttattttgccagaaaggaggc
actgtgtccatattgtctatgagcaaaggttctgtgatatcatcattgtgcataacagaa
gctgatcaattagaggatacaatcaattgttttgcactttgtaatgaagatacaggcata
atcacccatcacaagagtggactgttcaaattatgggattggaaaactaataagttaatg
aaattatggaaatcaattcataaaggacctgtaatgcaaataactctttcgaataatagt
attttaatggcatctggtggaagtgatggatctgtcagattgtggaatttacaacatcat
gcatgtacacataattttaaaggaatacagggagtagttagcgtgttggaattttattcc
aacaatgaaaaatcacttctctttggagctggtgacaacacaaaaatttatggttgggat
atcattaccggacaggaaaaaattattctctctggacattttagtaaagtaacatctctt
agttttcacgaaaatggaaattatttagttagttcgggaagagacagagtattgatcttg
tgggatatatccactggaacatcaatacgtgttttaccagtatacgaaggaattgaagga
atttttataatatctgcgaaatgtcttccagtatttattacatcacgtaaaagcgatggt
atatatgttgcttcggctggcgaaaaaggtgtcgttaaaatctgggagatgaaaacgggc
aagcagatttatgtgcaagacgatcctttagtgccaccgtctaaggaagaaggaggctta
tcaattacgcacttactttacaacagcatctctaatatttttgcagtagtatctgtcgat
cacaacataattgttcattcaatggagttatttgaatgcaaaaagcagttggtaggctac
agcgatgaaattctagatgttgcgtatcttggagataatgatagtcatattgcactcgcg
acaaatagttgcgatataaaactttatgaaattgcctctatgaattgtcaactattatgt
ggtcatactgacagcattttggctctcgctacgactttagtaaatgtaaatctgcttcta
tcttcggccaaggataatagtgtccgcgtatggctactggataaagatacaatgaggatg
tcttgcattggacatgccgttagacatacagcatcgattagttctattgccatatctcaa
acattacctaaattcttcactactgttgctcaagattcatgcttgaaactgtgggaatta
cccaacaatctcgaatcacataatcaagatttatcattaaatgtaaggcatacaatatta
gcacatcaaaaagatataaattgtgtaaccatctcaccaaatgataaactgattgctaca
gcgtcgcaagataaaactgctaagttatggtatgctgaaaatttacaattagttggtgtg
cttcatggtcaccgaagaggcgtatggtgtgttcgattttcgccaattgatcaagtactt
ttaacaacgtctgctgactgtactatgaaattgtggtctttaacggaactcaattgtcta
aagacatttgaaggacacgaatcttctgtcttgagaggagaatttttatcatgtggtatg
caactaataacgtcgggtggagatggtcttctgaaattatggaatatcaaaacgtccgaa
tgcatatcaactttgaaccaacatgaaagtcacgtttggacgctcgcagttacaaaagat
cagaaacatatgatcagtggaggtagcgattcattattagttatttggagagacgtaact
gaagaaagaaaagcgcaagccgcatcggagaaagcacaatttgtgcttgaagagcaaaga
ttggccaatttacttaaagctgaagaactgcaggctgcattaaaattggctctaaaacta
gagcgaccattacaagtgctcaaaatcatagaagctatatcgaagaagacgaacaatgag
tttacagaaataataaaggaattaaaaccatatcacaaggaaacattactcaagtgtgca
gttacatggaacatgaacagccgaaactcgcttgctgctcaagtaattataaatgcctta
ataacagaaatcgggacgcaggagctgcagacaccaaatttatcttctactctagaagtt
atgatgccttatactgacagacattttaaaagattgacaaaacttttgcaggatctatat
ttattaacgtatacttttaatcgtatgaaacctgatattatatcaattggtaccaaataa

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