Atta colombica: 108684374
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Entry
108684374 CDS
T11098
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
acoc Atta colombica
Pathway
acoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108684374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108684374
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108684374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WDR55
Utp13
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
VPS8_N
Beta-prop_WDR75_2nd
RAB3GAP2_N
Beta-prop_DCAF12
Beta-prop_VPS8
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
108684374
NCBI-ProteinID:
XP_018044138
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSKANLKEAFEVESKYGAFYTGGNVQWSANAEYLFCQKGGTVSILSMSKGSVISSLCITE
ADQLEDTINCFALCNEDTGIITHHKSGLFKLWDWKTNKLMKLWKSIHKGPVMQITLSNNS
ILMASGGSDGSVRLWNLQHHACTHNFKGIQGVVSVLEFYSNNEKSLLFGAGDNTKIYGWD
IITGQEKIILSGHFSKVTSLSFHENGNYLVSSGRDRVLILWDISTGTSIRVLPVYEGIEG
IFIISAKCLPVFITSRKSDGIYVASAGEKGVVKIWEMKTGKQIYVQDDPLVPPSKEEGGL
SITHLLYNSISNIFAVVSVDHNIIVHSMELFECKKQLVGYSDEILDVAYLGDNDSHIALA
TNSCDIKLYEIASMNCQLLCGHTDSILALATTLVNVNLLLSSAKDNSVRVWLLDKDTMRM
SCIGHAVRHTASISSIAISQTLPKFFTTVAQDSCLKLWELPNNLESHNQDLSLNVRHTIL
AHQKDINCVTISPNDKLIATASQDKTAKLWYAENLQLVGVLHGHRRGVWCVRFSPIDQVL
LTTSADCTMKLWSLTELNCLKTFEGHESSVLRGEFLSCGMQLITSGGDGLLKLWNIKTSE
CISTLNQHESHVWTLAVTKDQKHMISGGSDSLLVIWRDVTEERKAQAASEKAQFVLEEQR
LANLLKAEELQAALKLALKLERPLQVLKIIEAISKKTNNEFTEIIKELKPYHKETLLKCA
VTWNMNSRNSLAAQVIINALITEIGTQELQTPNLSSTLEVMMPYTDRHFKRLTKLLQDLY
LLTYTFNRMKPDIISIGTK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctaatcttaaggaagcatttgaggtagagtctaaatatggagcgttttat
actggcggcaatgtacaatggagtgcaaatgcagaatacttattttgccagaaaggaggc
actgtgtccatattgtctatgagcaaaggttctgtgatatcatcattgtgcataacagaa
gctgatcaattagaggatacaatcaattgttttgcactttgtaatgaagatacaggcata
atcacccatcacaagagtggactgttcaaattatgggattggaaaactaataagttaatg
aaattatggaaatcaattcataaaggacctgtaatgcaaataactctttcgaataatagt
attttaatggcatctggtggaagtgatggatctgtcagattgtggaatttacaacatcat
gcatgtacacataattttaaaggaatacagggagtagttagcgtgttggaattttattcc
aacaatgaaaaatcacttctctttggagctggtgacaacacaaaaatttatggttgggat
atcattaccggacaggaaaaaattattctctctggacattttagtaaagtaacatctctt
agttttcacgaaaatggaaattatttagttagttcgggaagagacagagtattgatcttg
tgggatatatccactggaacatcaatacgtgttttaccagtatacgaaggaattgaagga
atttttataatatctgcgaaatgtcttccagtatttattacatcacgtaaaagcgatggt
atatatgttgcttcggctggcgaaaaaggtgtcgttaaaatctgggagatgaaaacgggc
aagcagatttatgtgcaagacgatcctttagtgccaccgtctaaggaagaaggaggctta
tcaattacgcacttactttacaacagcatctctaatatttttgcagtagtatctgtcgat
cacaacataattgttcattcaatggagttatttgaatgcaaaaagcagttggtaggctac
agcgatgaaattctagatgttgcgtatcttggagataatgatagtcatattgcactcgcg
acaaatagttgcgatataaaactttatgaaattgcctctatgaattgtcaactattatgt
ggtcatactgacagcattttggctctcgctacgactttagtaaatgtaaatctgcttcta
tcttcggccaaggataatagtgtccgcgtatggctactggataaagatacaatgaggatg
tcttgcattggacatgccgttagacatacagcatcgattagttctattgccatatctcaa
acattacctaaattcttcactactgttgctcaagattcatgcttgaaactgtgggaatta
cccaacaatctcgaatcacataatcaagatttatcattaaatgtaaggcatacaatatta
gcacatcaaaaagatataaattgtgtaaccatctcaccaaatgataaactgattgctaca
gcgtcgcaagataaaactgctaagttatggtatgctgaaaatttacaattagttggtgtg
cttcatggtcaccgaagaggcgtatggtgtgttcgattttcgccaattgatcaagtactt
ttaacaacgtctgctgactgtactatgaaattgtggtctttaacggaactcaattgtcta
aagacatttgaaggacacgaatcttctgtcttgagaggagaatttttatcatgtggtatg
caactaataacgtcgggtggagatggtcttctgaaattatggaatatcaaaacgtccgaa
tgcatatcaactttgaaccaacatgaaagtcacgtttggacgctcgcagttacaaaagat
cagaaacatatgatcagtggaggtagcgattcattattagttatttggagagacgtaact
gaagaaagaaaagcgcaagccgcatcggagaaagcacaatttgtgcttgaagagcaaaga
ttggccaatttacttaaagctgaagaactgcaggctgcattaaaattggctctaaaacta
gagcgaccattacaagtgctcaaaatcatagaagctatatcgaagaagacgaacaatgag
tttacagaaataataaaggaattaaaaccatatcacaaggaaacattactcaagtgtgca
gttacatggaacatgaacagccgaaactcgcttgctgctcaagtaattataaatgcctta
ataacagaaatcgggacgcaggagctgcagacaccaaatttatcttctactctagaagtt
atgatgccttatactgacagacattttaaaagattgacaaaacttttgcaggatctatat
ttattaacgtatacttttaatcgtatgaaacctgatattatatcaattggtaccaaataa
DBGET
integrated database retrieval system