KEGG   Atta colombica: 108684635
Entry
108684635         CDS       T11098                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
acoc  Atta colombica
Pathway
acoc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108684635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108684635
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108684635
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N MMR_HSR1 GTP_EFTU_D2 AAA_22 Dynamin_N
Other DBs
NCBI-GeneID: 108684635
NCBI-ProteinID: XP_018044545
LinkDB
Position
Unknown
AA seq 695 aa
MSRHRDVRSMNYSDEYDAYDDVYGHSIEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESSPLFNEEKFNLSELEKAKLMSCLETIRNVIGDTVSDSKLKEKIILSNFDAN
IALDAILKESSPKKITDSIENKKEQLERHPGSKLSSKPTLQVTTPSTVKVVPTGTKPIVK
GFDLSGVENTDLLSPRCGSPSSNRNSPEIKRKEDIIQKEKRIVSSKMNSPRCQSPISGHI
TPELDTKVKSNASNEEKVDVEAIYHSKRDGSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQ
VPQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAP
GHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKDRFNEIVDKMSVFLKQAGFRDTVTFVPCSGLSGENIVTKPKEQLSNWYIGP
TLVNVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLSDKVLVLPQNEI
AIVKGLQSDEASTANAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPITTCFQAHVVIF
AIAKPITKGLPVVMHQQSLVQPAVIIKLIAQLHRSTGDVIKKKPRCLSKNSSAIIEVATQ
TPVCMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgtcgcgacatcgagacgttcgttctatgaattattctgatgaatacgatgcctatgat
gacgtttatggacattcaatagaggacgactattgcgtatcacctagtgtggagcagttt
ttatttgatcgaagcaaacaacaaaatattgcttcattcatcacagaacctgatatagtg
gaagataatgaagatattgatgagtcttcaccattgttcaatgaagaaaaattcaatctt
tctgaattagaaaaggcaaaattaatgtcttgtttggaaacaattagaaatgttataggt
gatacagtatctgattctaaattgaaagagaaaattattctgtcaaattttgatgcaaat
atagcacttgatgctattttaaaggagtcttcaccaaaaaaaatcactgattctatagag
aataagaaagaacaattggagcgacatccaggtagcaaattatcgtcaaaacctacgttg
caagttacaacaccatctactgtaaaggtcgtaccgaccgggacaaaacctattgtgaaa
ggttttgatttaagtggtgtagaaaatacagatttgttgagcccacgttgtggaagtcca
tcttccaatcggaacagtcctgaaatcaaacgcaaggaagatatcatacaaaaggagaaa
agaatagtctcgtcaaaaatgaatagtccaaggtgccaatcacctatatcgggtcatata
acaccggaattagatactaaagtaaagtctaatgcatctaatgaagaaaaagtggatgtc
gaagcgatatatcacagtaagagagacggcagcaaggaacagcttcacttggtagtcgtg
ggacatgttgatgccggaaaaagtacattacttggacgtttactctgcgatttaggtcaa
gtaccacagagacttattcataaatatcaacaagagagtaaaaaaataggaaaacaatcg
tttgcttatgcttgggtactcgacgaaactggcgaagaaagagagcgaggaataacaatg
gatataggtcactcgaagtttgaaacggacacaaaatctatcactctgctagatgcacca
ggacacaaggattttattccgaatatgataaccggtgctacgcaagcagatgtagctttg
ttagtagtcgatgcaacgagaggcgagtttgaaactggattcgatagtggaggacagaca
cgcgaacatgccctattattacgctctttaggagtatcgcaactagcagtagttgttaac
aaattggataccgtaaattggtctaaagatagattcaatgagatagtagacaaaatgagt
gtgttcctaaaacaagctggcttcagagataccgtgactttcgtaccttgcagcggttta
tctggagagaatattgtaacaaaaccaaaggagcagctctctaattggtatatcggacct
actctagttaacgttatcgataattttaagtgcccagagcggcctataaataaaccattt
cgtttttcggtgaatgacatatttaagggtactggatctggattctgtgtgtctggtcat
gtggaaacgggtatggtatccttgagtgataaggttttagtactacctcaaaacgagatt
gcaattgttaaaggtcttcagtcggatgaagcttcaacggcaaatgcttttgctggtgat
cacgttgcgctgacattagcgggaattgaacagcaaaatgtgggtatcggcgatattatc
tgtaacccgcagaatccagtaccgataacgacctgttttcaagcgcacgttgttatattt
gcgatagcaaaaccaattacaaaagggcttccagtagtgatgcaccaacaatctttggta
caaccagcggttatcataaaattaatagcgcaacttcatcgaagtactggtgacgtgatc
aagaaaaagccgcgttgcttatctaagaattctagtgcgatcattgaagtcgcaacgcag
acaccagtttgcatggagttgtataaggatatcaaacagctaggtagagttatgttacga
ttagaaggtaccactattgcagctggtttgattacaaagattttataa

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