Atta colombica: 108684904
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Entry
108684904 CDS
T11098
Name
(RefSeq) probable nucleoporin Nup58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108684904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108684904
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108684904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
META
SKA1
Motif
Other DBs
NCBI-GeneID:
108684904
NCBI-ProteinID:
XP_018044931
UniProt:
A0A195BLF7
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MAFTFGSPAVTSASTGFGFAAQKPVTGFGLANTSFGTPTTTSGTLTFGALSTPTTSIGLN
FGFGTPATSTPAQCSNLLLGSNTATTMTTAPSLFPTPTTSTPLFTGLSFGTPATTNTLTF
GATSNTTATGSLTFGTATTNTPLFGSGTGSTLLGSKPTTVLTTTTTSKGLGGLDVSVNNK
GLSQGNSSSTAAKENLLPNELMQTIDKFKEFVKMQKGLSSDIARGSARPLNRCAEDTASL
MEMLSTLSGSVQRDRSSADKLKQDTARALQSAEIAQRTHDTPAGLQYENNMPLQFFMELA
ESFEQDLMLFRSQIETTEKHIQTMMAPRTLTPQELTATMSKLHESLVAVAGRLQSVHAKV
QQQKEQYLNFRKYLLKDNTNVFDNIKVNNKSNRSSIGKITSGPTPFGPGNKNFLSSTTLN
SNRPASYETRNLVWESSTPVPSATNIAIGSSTKPPTASLNFNAPINLTSPLPVNGTSSNF
QLQKPPVGNKRGKH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacgttcggaagtccagcggtcacctctgctagcacgggttttggatttgcg
gcgcaaaaaccagtgacaggctttggtttggccaacacgtcgttcggcactcccaccaca
acatctggcacattaacgtttggagccctgtctactccaacgacttctataggtctcaat
ttcggatttggtactccagcaacctctacaccagcacaatgtagtaatctccttctagga
tccaacacagctactacaatgactaccgctcctagtttatttcctacccctacaacatcc
acacccttattcacgggtctcagctttggtacaccagctacaacgaacactctaactttt
ggtgctacatctaatacaacagcaacaggaagtttaacttttggtacagctactaccaac
actcccttattcggatctggaactggaagcactttattgggttcaaagccaacgactgtt
cttactactacaactaccagtaaaggacttggtggtttagatgtttctgttaataataag
ggtctttctcaaggaaatagtagttcaacagcagccaaggaaaatctattgccaaatgag
cttatgcaaactatagacaaattcaaggaatttgtaaaaatgcaaaaaggcctatcttct
gatattgcaagaggttcggcaagaccattaaatcgatgtgcggaagatacagcgtcccta
atggaaatgttgtccacgttatctggctcagtacaacgagatcgttcttcagctgataag
ctgaagcaagacactgctagagcattgcagagcgccgaaatagctcaaagaacacatgat
actccagctggtttgcaatatgaaaataatatgcccctacaattcttcatggaattagct
gaaagtttcgaacaagatttgatgttattcagatcacaaattgagacaactgagaaacac
atacaaactatgatggcgccgagaactttaaccccacaagaattgacagcgaccatgagt
aagcttcacgagtctttagtcgcagtagctggccgactgcaaagtgtacatgctaaagta
caacaacagaaggaacagtatctcaatttcaggaaatatttgttgaaagataatactaat
gttttcgacaatatcaaggtgaacaataaatctaatcgaagcagcattggcaaaatcaca
agtggtcccactccttttggaccaggaaataaaaattttttatcatcgacgacattaaac
tcaaatcggccagcgagttatgaaacacgaaatttagtttgggaaagttcaacaccagta
ccatctgctactaatattgctataggctcatctacgaaaccgccaacagcaagtttaaat
tttaacgcgccaattaatttgacttcaccattgccagtaaatggaaccagctcaaacttt
caacttcaaaaacctcctgttggtaataaacgagggaaacattga
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