Atta colombica: 108684968
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Entry
108684968 CDS
T11098
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
acoc Atta colombica
Pathway
acoc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108684968
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108684968
NCBI-ProteinID:
XP_018045030
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MLHYGHVALAALIIIIITLAGPASSQHVRDKVPSRGSHAKRPHPCEQSSCYPATGNLLIG
RKDKLTASSTCGLHGPERFCIVSHLKDRKKCFFCDASIPKQQHNIENIVSGSWWQAENGV
ENVTIRFDLEAEFHFTHIIIRFQTFRPAAMLIERSYDFGKTWQVYRYFAHNCEHYFPDIP
THQPQRLTDVICETRYSAVAPSTGGDVIFRVLPRNLEIDNPYSKEVQNLLKITNLRIIMT
RLHTLGDDLLDDRAEIREKYYYAIQDMVIRGSCSCYGHASRCLPLPGVSDEENMVHGRCE
CTHNTKGLNCESCEDFYNDLPWKPAVGKQTNACRPCNCNNHTNSCHFDEMVYERSGRVSG
GVCDDCQHNTRGQNCEQCKPFYYHDVTKDISDPEACQPCDCDLGGSLDDGICDSRTDPLS
GDESGRCHCKVNVDGRRCDRCKNGFWNFDPDSPEGCQACTCNILGTIDNQGCNVVTGECT
CKRYVTARDCNQCLPEYWGLSEDRDGCKPCDCDPGGSYENSCDVITGQCRCRPHVSGRTC
NQPEQSYYTGSLDFLIYEGELSRATDNCQVVIREPYRDGRNSTWTGTGFMKALEGSVLNF
TIDDIRRSMWYDVIVRYEPVHPGVWEDVQVILERDSLPDPNGPCADWKPEYDHLWVQLPL
RSRSAVAQPSVCLEAGKRYNLLLQFRKFNSHVDTPLASILVDSIVLKPRIDVIPFFKAPG
LGELRRQEYERYHCNEIYNDVNSVWNNVPDICRKYQNSIGYYVFDGAHSCECNPTGSRSL
LCKNYGGMCPCKPNVVGRRCDRCAPGTYGFGPEGCIPCDCDGVGALDNFCDVETGRCKCR
PNTYGRTCGQCEPGFWNFPHCQRCECHGHADSCDSKTGACINCRDFTTGHNCDRCVDDFY
GDPRIGVDIPCRACPCPGTRESGHSYANSCSLDSITQDVVCECFEGYSGPRCEHCAENYF
GNPEISGGSCQLCNCNNNTDLRRVGNCDPHTGHCLQCLFNTDGYTCEVCKAGFYGDALRQ
NCQDCRCNVLGTDKTAGSCDHHTGQCPCLPHVIGQLCDSCEENHWRIASGQGCDPCECDV
VGSISDRCNPYDGTCECKPGFGGRRCNECQTNFWGNPNVECYPCECDVIGSASQQCDRET
GVCVCHKGIGGEKCDQCDRGYHGEAPQCSPCGECFDNWDLILDGLRNKTYAVIQEASRIQ
KVGTTGVYSQEFDDMEESLNEVQDLISNTTIRSQDLDALDNLAEELAKNISESARQLDEA
NNHLENLSQRVNLGDVALKKLRNRTNSLHEAAADLRENATRLQEENVLGALNVTQQMAEQ
SRQAEKMANDSTNVLGDAERFRKHTENLLAKNRASVDEAQERNKESLTKLNEKLKTFRMA
VPELNLRMCGDNVTECSSVCGGAGCGTCGGLSCDVGAVSKANQALDVAKQQAAKIKSHKD
DAEQLLRNMSQIKQDATAARSNAQDAFNIAWEAQSFFEKLAKNMANMIKQMLSTQDEDQP
TPAMVRALAYAILARNIQLEPDQIAQLADRIEDMVGSLTDSEKILADTKDDLRLAHDLEE
RANQIKSTAIEKQVLANKMILLLNDAQKAQHLAQDAIDKAEADVSKSQKDLADIADVTKA
AQIQANSTTQTVEALDARLKQLQTQSAKNSFVLTEIGTEAKKVADEAQAIDGKTKKLSEE
YKRADESLNQRVNKTKGDIQRAKRLLTRASELTADTSTKSKDLDGMESVYKENERLLKEL
MGDVDMLMMEMERNMAEIEKKSQLYRQCSA
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattatgggcacgtggctctcgcagctttaattattataattattactttagca
ggacctgcgagttcacaacatgtacgggacaaagtaccatccagaggatcgcacgcgaaa
agaccgcatccctgcgaacagagctcgtgttatcccgcaaccgggaacttgctaatcggt
cgtaaagacaaactgactgcttcgtcgacatgcggtcttcatggtcctgaaagattctgc
attgtttctcatcttaaagacagaaagaaatgcttcttctgcgatgcatcgataccaaaa
caacagcataatattgagaacattgtgagcgggtcgtggtggcaagccgaaaatggagtg
gaaaacgtcacgatacgcttcgatcttgaggcagagtttcacttcacgcatatcattatt
cgcttccaaactttccgaccggctgctatgttgatcgagcgatcgtacgattttggaaaa
acctggcaggtatatcggtatttcgctcataactgcgagcattatttccccgatatcccg
actcatcaacctcaaagattaacagatgtcatctgcgaaacgagatattcagctgttgca
ccgtccactggcggtgacgtaattttcagggtgttaccacgaaatttggaaatagataat
ccttattcgaaggaagtccagaatctattgaagatcaccaatctcagaatcatcatgact
agactccatactctaggcgatgatttgctcgacgatcgggctgagattcgcgagaaatat
tattacgccatccaagatatggtgattcgtggttcgtgttcttgttatggacacgcctct
agatgtttaccgttaccaggagtctctgatgaagagaacatggtccacggcagatgtgag
tgtacacacaatactaaaggtctcaattgtgagagttgcgaagacttctacaatgatctg
ccgtggaagcccgctgtcggcaaacaaacgaacgcttgtagaccttgcaattgcaacaat
cataccaattcttgtcacttcgacgaaatggtctacgagagatcgggcagagtgtccggc
ggagtctgcgacgattgccagcacaatacgcgagggcagaattgcgaacagtgcaagcca
ttctattatcatgacgtgacaaaggatatctctgatccagaagcttgtcaaccctgtgac
tgtgacctaggcggatccttggatgatggcatatgcgactcaagaactgatcctctaagt
ggcgatgagtctggacgctgtcactgtaaagtgaatgttgatgggcgtcgttgtgaccgc
tgtaaaaacggcttctggaatttcgatcccgacagtccagagggatgtcaagcctgcact
tgtaatatcttgggtaccatcgataatcagggttgcaatgtggtgaccggtgaatgcacg
tgcaaacggtatgtcacagcgcgtgactgcaatcaatgcttaccggagtattggggactc
tccgaggaccgcgatggatgcaaaccatgcgattgcgatcctggtggatcctacgaaaat
tcctgtgacgtcatcaccggtcagtgcagatgcagaccacacgtcagcgggagaacttgc
aatcaaccagagcaaagttactataccggctcgcttgattttctcatttacgaaggagag
ttgtctagggctactgataattgtcaagtggtgatcagagagccttatcgcgatggtagg
aacagtacgtggaccggtacaggtttcatgaaggccctcgagggctcggtattgaatttc
actatcgacgatattcgcagatcaatgtggtatgatgtgattgtacgatatgaaccggtg
catccaggagtttgggaggacgtgcaggttattcttgagagagatagtttacctgatcct
aatggaccgtgtgcggattggaaacctgaatacgatcacctgtgggttcaattacctcta
cgttcgagaagtgccgtggcacaaccatctgtatgtttagaggcaggaaaacgttacaat
cttctgctgcaattccgcaaatttaacagccacgtggacacgcctttagcctccatcctg
gttgattcgattgttttgaagccaaggatagacgtgatacccttcttcaaggcgccgggt
ctgggtgaactgcgtcgccaagaatacgaacgttaccactgtaatgaaatatataacgat
gtcaacagcgtgtggaataatgtacccgatatctgcaggaagtatcaaaatagcattggt
tattatgtcttcgatggtgctcattcttgcgaatgtaatccaacgggttctcgcagtctt
ctatgcaagaactacggcgggatgtgcccgtgcaagccaaatgtagttggtagacgttgt
gatcgttgcgcaccgggaacctacggattcggtccggagggatgcattccctgcgattgt
gacggcgtcggtgcactcgacaatttctgcgacgtcgagaccggacgttgcaaatgtcgt
cccaacacctacggcagaacctgcggtcaatgtgagcctggcttctggaacttccctcat
tgccaacgttgtgagtgtcacggacatgcggacagttgcgactcgaagaccggagcctgc
atcaattgtcgagatttcaccaccggacataattgcgatcgttgcgttgacgatttctat
ggcgatccgcggattggtgtagatataccttgcagagcgtgtccttgtccaggcacacgt
gagtccggtcattcctatgccaacagctgttcattagactcaataacgcaggatgtagtg
tgcgaatgtttcgagggatactccgggccccgctgcgagcattgtgccgagaattatttc
ggcaacccggagatatcaggtggtagctgtcaactctgtaactgtaacaataacacagat
ttacgtcgtgtcggcaactgcgatccgcacaccggtcattgtctccaatgtctcttcaac
actgacggttatacttgcgaggtgtgcaaggcagggttctacggagacgctctacggcag
aattgtcaagactgtagatgtaacgtcctaggcaccgataaaaccgcgggatcgtgcgac
catcataccggacaatgtccgtgtctgcctcacgtcataggacagctttgcgactcctgc
gaggaaaatcattggagaatagccagcggacaaggttgcgatccttgcgagtgcgatgta
gttggaagtatttcggacagatgcaatccctacgacggtacttgcgaatgcaaaccagga
tttggtggcaggcggtgcaatgagtgtcagacaaacttctggggaaatccgaacgtggaa
tgttatccatgcgaatgtgacgtgatcggttccgccagccagcaatgtgatagggagacc
ggagtatgcgtttgccataagggtatcggcggtgagaagtgcgatcaatgcgaccgtggc
taccacggcgaagctccgcagtgcagcccttgtggtgaatgcttcgacaattgggatctg
atattggatggtcttaggaacaagacatacgcggtcattcaggaggcctcgaggatacag
aaggttggtacgaccggtgtttacagtcaggaattcgacgacatggaggaatccctaaat
gaagtacaagacttaattagcaacactaccattcggagtcaagatttagacgcgttggac
aacttggccgaagaattggcgaagaatatctccgaatcggccagacaattggacgaagcg
aataatcatttggagaatctcagtcaacgagttaatcttggtgacgttgcgttgaagaaa
ttgaggaacaggactaacagcttgcatgaggccgccgctgatttgcgggagaatgccacc
agattacaagaagagaatgttttaggcgctctcaatgtaactcagcagatggcagagcaa
tccagacaagccgagaaaatggcaaacgattctacgaatgttctgggcgatgcagagcga
ttccgcaagcatactgagaacctcctggcgaaaaatcgagcatccgtggacgaggctcaa
gaaaggaacaaggagtcattgacgaagttgaatgagaaattgaagacgtttcgtatggcg
gtacctgagctaaatctacgcatgtgtggtgacaatgtaacggaatgcagtagcgtctgc
ggcggtgcgggttgtggcacttgtggaggattatcttgtgacgtaggtgcggttagcaag
gctaatcaagctttagatgttgccaaacagcaagctgccaagatcaagagtcataaggat
gatgccgaacaattattacgtaatatgagccaaatcaagcaagatgcaacagcggcaaga
tcaaacgctcaagatgctttcaacattgcatgggaggcacaaagcttctttgagaagctt
gccaagaatatggcaaatatgatcaaacaaatgttgagtactcaggatgaggatcaacct
acaccagctatggtaagagctcttgcgtacgcaatactcgcgaggaatatccagctggag
ccggatcaaatcgcacagttggccgatcgcatcgaggatatggtaggttctctcactgat
tctgagaagattctcgccgataccaaagacgatctacggttggcacatgacctcgaggaa
cgcgctaatcaaattaaatcgacagccatcgagaaacaagtcttggcgaacaaaatgatt
ttgctattgaacgacgcacaaaaggcgcaacatctggcgcaggacgcgattgataaggcg
gaagctgacgtgtccaaatcgcagaaagatctcgcggacattgccgacgtaacaaaggct
gctcagatccaagctaacagcaccacacaaacggtagaagcattagatgcccgtttaaag
caacttcagacgcaatctgcaaagaacagtttcgtcctaacggagatcggcacagaagca
aagaaagtcgccgatgaggcacaagcaatcgacggcaagacgaaaaaactgtcggaggaa
tacaagagggcggatgaatcactgaatcagcgagtcaacaagaccaaaggcgatattcag
cgggcgaagagactcttaacgcgtgcttccgagctaacagcagatacatcgactaagtcc
aaagatctggacggcatggagagtgtttataaggaaaatgaacgactgttgaaggaatta
atgggcgatgtagacatgctgatgatggaaatggaaagaaacatggcggagatcgagaaa
aagtcgcagttatacagacagtgttctgcttaa
DBGET
integrated database retrieval system