Atta colombica: 108685158 Help Entry 108685158         CDS       T11098                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism acoc  Atta colombica Pathway acoc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:acoc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     108685158  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:acoc00536]     108685158 Glycosaminoglycan binding proteins [BR:acoc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108685158 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  108685158 NCBI-ProteinID:  XP_018045312 LinkDB All DBs Position Unknown AA seq 1698 aa AA seqDB search MRLLDHTRGQWRTLRSTWIVLLVHSLFLMIILSDLQRNAVDAALQDTSKNAIDIIEAVGM QEQLFGMRRTESRCKDDTIAYDIMEAAILMAPTNVLFPAGIPQDFSILVVAKPKANESTS KNYSTSVLFTIYGDSGEEQLILSLGRDIKFFYSTNPDDRNELISFDVDISDGQWHRLGVS IKGDSVTIILDCNRHITKKLRRNVEKTIAGILMIGQQLKGDLYLGSLEMLKIALNPDAAY EICTMFAPDCEHESRYGLNYNSSFNEDDYEEENESDSDEDDNQDFLPHGTITNTINILTK NFTSYEMEITTMANVYNAESNHQQNYGESTNPYDEEYIKHYNTRGSPGLRGFPGPPGVPG PPGEKGEPGRDGLSGLPGVSGPPGNVFVIPSLTHQSNEKGPDSQAEMLRQMISQHILAMR GVEGPMGLTGVPGPDGPLGPQGQKGEPGEIGEPGLRGDQGSPGNPGREGRRGRPGRDGER GPSGLPGMKGEQGQIGLPGLPGDKGERGSSGKPGESGLPGHEGMQGEDGPPGLPGLPGEL GPRGFIGSRGFPGLPGNPGIPGNEGPPGIKGNDGPLGPPGAPGQSGSTGSIGPPGPQGPP GPIGLVGPQGKPGIPGLSGADGSPGLPGNPGIPGTKGEQGPTGLQGPVGFPGVRGVKGDE GQRGLAGERGEKGDRGLEGEKGDTGAKGEPGATGPQGIPGLEGLEGPKGFEGLRGETGPA GLPGEKGKLGLPGYAGYPGNPGEKGDKGQLGNQGASGDKGERGNSGLQGERGTMGPRGFR GTRGRRGAEGLPGPKGDTGQPGPAGPSGEIGPPGVEGPRGFVGPSGLPGLDGKDGIPGPP GERGPTGESGSPGSPGIPGVIGLPGPPGELGQPGEPGASGSPGAPGEIGLPGEQGKEGPP GPFGLTGLKGSPGPGGLPGFPGERGLSGLPGLPGLKGEMGPIGVQGLLGNKGIQGEPGKD GSPGPEGKQGHKGDMGSIGLKGEKGNPGPVGPVGRDGLPGQRGLPGPPGPVGSPGEDGDK GNVGPPGEKGFKGSQGNVGFPGPQGVQGPRGESGSVGPPGEKGPPGEIGQRGPKGEVGPI GATGSAGSVGPSGLPGQPGIKGEVGDPGTIGPIGPLGIPGERGPRGSKGLKGTEGPTGPE GRQGEKGDDGMPGPPGKPGLEGKQGERGLPGIKGEEGKLGLLGLPGLRGLTGPEGAKGDT GLPGLPGPPGEPGLMGAKGEPGKDGEDGRVGDSGVPGEVGLPGKEGLPGPPGKSGPEGPA GQQGNTGLPGEKGDIGLPGAPGFEGRVGPQGPSGLPGLPGEKGLSGPAGENGIVGMPGTV GAPGIIGPIGSKGQKGDKGRRGIKGYRGESGLIGIKGDHGKRGEKGDRGFPGTQGFKGNP GHPGQVGPRGEQGFVGLPGLPGSPGLKGNAGNDGMRGDIGPAGPPGPPGPPGLSIGQSDF DRIIPPMIYRDQSARRKRDAFEDVDEEEIFDKKLSDINKAFYNIRQELHLMRKPIGTRDN PARTCRDLFYGHPDFKDGWYWIDPNLGMPDDAISVICNITNMGETCIFPDIHSSHMPSIP WRKEDNKTDWYSHLRGGFRISYETIGVVQMNFLRLLSQEAYQNFTYTCTNSVAWYDDENR SYNLSLRLLGDNGDEFSYNNIRPHLIADECKSRSGKEETIFLIRTSKLQQLPLIDFYPVD YGLPQQAFGFKVGPICFK NT seq 5097 nt NT seq  +upstreamnt  +downstreamnt atgcggctactggaccacacgagagggcaatggagaacactgcgatccacgtggatcgtg cttcttgtacattcattgtttttgatgattatcctatctgatttgcagcgaaacgcagtg gatgctgcgctgcaagatacatcgaagaatgcgattgatataattgaagctgtggggatg caagagcaacttttcggaatgagaagaacggaaagccgttgcaaagatgatacgatcgcg tacgatattatggaagctgcgattttgatggctcctaccaatgtattatttccggccggc ataccacaagatttttctatcttagttgttgcaaagccgaaagctaacgaatcaacatcc aaaaattactccacgtcggtgctttttactatctatggtgacagtggcgaagaacagtta attctttcgttggggcgtgacattaaatttttctatagcacaaatccggatgacagaaat gaacttatttcttttgatgtcgatatttctgacgggcaatggcatcgattaggagttagt attaagggagactccgttacaattattctcgattgtaatagacatattacgaaaaaatta cggaggaatgtggagaaaacgatcgctggcatccttatgattggacagcaacttaagggc gatttatatctgggaagtcttgagatgctgaaaattgctctaaatccagacgctgcttat gaaatctgtacaatgtttgcgccagattgtgaacatgaatcaagatatggactgaattat aattcatctttcaacgaagatgattacgaagaagaaaacgagagtgactcagatgaagat gataatcaggattttctacctcatggcacaataacaaatacaattaacattttgacaaag aattttacatcttacgaaatggaaataacgacgatggcgaatgtgtataatgcggaatca aatcatcagcagaattatggagaatcgacaaacccttacgacgaagaatatataaagcat tataatacccgaggttcacctgggctccgtgggtttcctgggccgccaggagtacccggc cctcctggcgagaagggcgaacccggacgagatggattatccggattgccaggtgtatct ggtccgccaggtaacgtcttcgtgataccctcgttgactcatcagagcaacgaaaaagga ccggattctcaggcagaaatgttgcgacagatgatatcacaacacatacttgcaatgaga ggcgtagaaggtccgatgggccttacaggtgttccgggtccagatggaccccttgggcct caaggtcagaagggagaacctggtgaaatcggcgaacctggacttagaggagaccaagga agtcctggaaatcctggtagagagggtagaagaggtcgtcccggcagagacggcgaacgc ggtcctagtggactgccaggaatgaaaggagagcaaggacaaataggattaccaggtcta ccaggtgataaaggcgaacggggatcctcaggtaaacctggtgaatcaggtttgcctggt cacgaaggaatgcagggtgaggacggtcctccaggtttaccaggtctacccggtgaattg ggtccaagaggatttattggatcaagaggttttcctggattacccggtaatcccggtatt cctggaaacgaagggccacccggtattaaaggtaatgatggtccactcggtccacccggt gcaccgggacaatcaggatctacaggttcaataggaccacctggacctcaaggtccacca gggccgatcggtttagttggtccacaaggaaagccaggaattcctggtctgtcgggtgct gatggatctcctggacttccaggcaatcctggaatcccagggacaaagggcgagcaaggt ccaacgggtttacagggtccggtaggatttccgggtgttcgaggtgtaaagggcgatgag gggcaacgtggtttagcgggtgaacgcggtgaaaaaggtgatagaggtttggaaggcgaa aagggcgatacaggagcgaaaggagaacccggagcaacaggtccgcagggcattcctggc cttgaaggtttggaagggccgaaaggttttgagggacttcgtggtgaaactggacccgct ggtttacctggagaaaaaggaaagctaggcctaccagggtatgctggttatcctggaaat cctggagaaaaaggggacaaagggcaactaggaaatcaaggagcaagcggcgataaagga gaaagaggaaatagcggattacaaggagaacgaggtacaatgggcccacggggttttaga ggaactcgtggaagaagaggtgcggaaggattaccaggaccaaaaggcgacactggtcaa ccgggtcccgctggaccatcaggagagattggacctcctggtgttgaaggtccacgtgga tttgtgggaccatcaggtctaccgggtctcgatggaaaagacggtataccaggtccaccc ggtgaacgtggtccaactggtgaatcaggatctccaggatctccgggaattcccggtgtt atcggtcttccaggaccacctggagaacttggtcaaccaggcgagcctggagcatctggc agtcctggggctccgggtgaaatcggtttaccgggtgaacaagggaaagaaggaccgcca ggtccattcggcttgacaggactcaaagggtctccgggtcctggtggattaccgggattt ccaggtgaaagaggtctgagcggtttaccgggattgcctggcttgaagggtgaaatggga cctatcggagttcaaggactgctcggtaacaagggtattcaaggagaacccggaaaagac ggatcaccaggtccagaaggaaaacaaggacacaaaggagatatgggttctatcggcctc aaaggcgaaaaaggtaatcctgggccagttggacctgtcggtcgtgacggtctaccggga caacggggtttaccaggcccacccggaccagttggttctcccggcgaagatggcgataaa ggaaacgtaggtccacctggtgaaaaaggatttaaaggatctcaagggaacgtaggtttt ccaggtccgcaaggagtacaaggaccacgtggtgaatctggttcagtaggtcctccagga gaaaaaggaccaccgggtgaaattggacagcgaggaccaaaaggcgaggtcggtccgatc ggagcaactggatctgctggatctgtaggaccgagtggtttaccaggtcaaccaggtata aaaggtgaagttggagatcctggaactattggtcctataggtcctttaggaattccggga gagcgaggtccaagagggtccaagggccttaagggtacagaaggtccgacgggtccggaa ggtcgtcaaggtgaaaaaggagatgatggaatgccaggacctcccggaaagccaggatta gaaggaaaacagggagaaagaggtctaccaggaataaaaggagaggaaggtaaattagga cttcttggacttcctggactacgaggattaactggtcccgagggagcaaaaggtgatact ggattacctggtcttcctggtccgcctggcgaacccggtctcatgggcgcgaaaggcgag cctggaaaggacggcgaggatggacgagtaggcgattctggcgttccaggcgaagttgga ttacctggtaaagaaggattacccggtccccctgggaaatcgggtccggaaggacctgcg ggtcagcaaggtaatacaggtttgccaggagagaaaggagatatcggtctccctggagcg ccgggttttgaaggacgtgtcggacctcaaggtccttccggtttgcctggcttaccaggc gaaaaaggtttgtcaggcccggctggggaaaatggtattgtaggtatgccgggaactgtt ggagctcctgggattattggaccgattggttcaaaaggacagaaaggtgataaaggtcgt agaggaattaaaggatatcgaggcgaatcgggactgattggaattaaaggcgatcatgga aagcggggagagaaaggtgatcgcggatttcctgggacacaaggatttaaaggaaatcct ggacatcctggtcaggttggacctagaggagaacaaggatttgttggtctacccggacta ccgggatcacctgggctaaaaggtaatgctggaaatgacgggatgcgaggtgacataggt ccggcgggtccgccaggcccaccaggaccgcctggcttgtcaataggacagtccgatttt gacagaataataccaccgatgatatatcgtgaccaatcagccagaagaaaacgtgatgct tttgaggatgtcgacgaagaggagatatttgacaagaagctttcagacataaacaaggct ttttacaacatacgacaggaattgcatttaatgcgtaagccaattggtaccagagataat ccggcgagaacatgcagagatttgttttacggacatcccgattttaaggatggttggtac tggatcgatccaaatttgggcatgccagacgacgctattagtgtgatttgtaatatcaca aacatgggcgaaacttgtatctttccagacattcacagtagtcatatgccgagcataccg tggaggaaagaagataataaaaccgactggtactcacatttacgtggaggattcagaata agttacgagacaatcggagttgtgcagatgaacttcctacgtcttcttagtcaagaagct tatcagaattttacgtatacatgcacgaacagcgttgcttggtacgatgatgagaatcgc agttacaacctctcgctgcgattactcggtgacaacggagacgaattttcgtataacaat atcaggcctcacctcattgcggacgaatgcaagagccgaagtggtaaagaggagaccata ttcttaattcgcaccagcaagttacagcagctaccgttgatcgatttttatccagtcgat tacggattaccacaacaagctttcggcttcaaagttggcccaatttgtttcaaatag

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