Atta colombica: 108685194
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Entry
108685194 CDS
T11098
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoc03041
]
108685194
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108685194
Spliceosome [BR:
acoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108685194
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108685194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
AAA_33
SAP
AAA_18
HeH
Motif
Other DBs
NCBI-GeneID:
108685194
NCBI-ProteinID:
XP_018045374
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MMDPSKLKVVELRAALSERGLDTKGNKPVLVERLRKALEEEAQECGSDLQTENIDDTALK
ETQERVVEATRSSQSPRTPNRASRSSSVTTPTKISTRNASRASTTPNSSKQSTPNKSQYD
EKAYETPMMNEETITQQQEMSKLSPEKYREEQEDDVSNILQNKIDSSDKYEEEAKHVNIL
EGNRANTFQVPVTEPSDKSSTIACVDQFSIIQEAHEVKGSSIDEVDKVQQLAEETKDITK
LEEKIEIKDEDKISIEKEYVEHKEDGSNIKDNIDIPEVEQPIHMIPDQADKMACELKHEE
KTIHDDYTVQDKKMDISANVENLDEKIDTINISQDKQQKATLDAGESNQMECNDRKRKRS
PSPAEIRQLSPMPQKSEDEPDLDESTVILSWYDSDLNLIINKDGFLSGTPMHDGDLCDMW
AGARASHGVSNGKVYYEARIVQHYPTITKDKKQSHMLRIGWSVPSTSMQLGEEKLSYAYT
SAGKQGTDKKFTDYGSPFGKDDVVGCYLDMTPESTIELFYTVNGKNVGSAFSICKEELGD
RPLFPHILSKNCTFVCNFGQEEAWCEQIPGYILVGNIESKDRIAGPRRPNGKADCEVIMM
CGLPAAGKTTWARKHAADHPDKLYNILAVHKLVEKTGDVALSDKEQNICQREIIIDRCNR
ALDQLINVASGRRRNYILDQKSNIYSSVQRRKMRNFCGYQRKAIVVIPTDKEYNQRLSMH
NTIEGNSLVSNLTEMKANFTAPSVGEFFDVVEWTGLGEEEAKKLVEKYNKEGKDAGFSQQ
PPTKQPRLDKTESIKETRDSRNNRDTRDRRNNYQDRGRNSSWRGSNMGGWRGERPQRGGY
MRHTGGYGPPPVPWRLRGRGGSAMARSDRRMGGIDRRSGNDRNRSVAPRQGGWGSMSGNY
QGSQQSSWGQQDNWSGSQATGNWNQQSGWGQQQWGGGWKGYSQGTYGQTGYNQHGYGNGN
WNSWNQQYYNNQYWGQQQQSGQTTAASGQAEITSEMVATTSTSAGYSYSQG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccgtcgaaattgaaagtggtggagttgcgagccgcactgagcgagcgcggc
ctcgacaccaagggcaacaagccagtgctcgtcgagcggctacgcaaggcactagaggag
gaagcgcaggagtgtggttcagatttgcaaacagagaatattgatgatactgctttgaaa
gagacacaagagagagtcgtagaagctacacgatcatcgcaatcaccacggacgcctaat
agagcatctaggagctcctcggtgacgactccaacaaaaatttccacgagaaacgcatcg
agagcatctactacgccaaattcttcaaaacaatctactccgaacaaatctcagtacgat
gaaaaagcatatgagacaccaatgatgaatgaagaaaccataacccaacaacaggaaatg
tcaaaattgtctcctgaaaagtatagagaagagcaagaagatgatgtgtcaaatatcctt
cagaacaaaattgattcatctgataaatatgaggaagaggcaaaacatgttaatatttta
gaaggtaatcgagcaaatactttccaagtacctgtgacagaaccgtctgacaaatctagt
acaattgcctgtgtagatcaattttctataattcaagaagctcatgaagtaaagggatct
agtatagatgaagttgataaagttcaacagctagctgaagaaacaaaagatattacaaaa
ttggaagaaaagatagagattaaagatgaagataaaatttcaattgagaaagaatatgtt
gaacataaagaagatggatctaatattaaggacaatatagacattccggaagttgaacaa
ccaatacatatgatacctgatcaggcagataaaatggcatgtgaattaaagcacgaagaa
aagactattcatgatgattatacagtgcaagataaaaaaatggacatttcagctaatgta
gaaaatttagatgaaaaaattgatactattaatatctcacaagataaacagcaaaaagca
acattagatgcaggagaatcaaatcaaatggaatgcaatgacaggaaaagaaaaagatcc
cctagcccagcagaaatccgtcaactatctcctatgccacagaaatcagaagatgaacca
gatcttgacgagtcaactgtaattttatcatggtatgattcagatttaaatttaattatt
aataaagatggatttctctctggtacacctatgcatgatggtgatctctgtgatatgtgg
gctggtgcaagagcgtctcatggtgtttcaaatggaaaagtctattatgaagctagaatt
gtacaacactatcctactatcacaaaagacaagaaacaatcgcatatgcttagaattggt
tggtcagtaccctctacatccatgcaacttggcgaggaaaaattaagttatgcgtataca
agtgctggaaaacagggtactgacaagaagttcacagattatggttctccattcggcaag
gatgacgttgtcggatgttatcttgatatgacacctgagagcactatagaattgttttat
actgtaaatggtaaaaacgttggatctgcatttagtatctgcaaagaggaacttggtgat
agaccattgtttccacacattctgagtaaaaattgtacgtttgtctgcaattttggccaa
gaggaggcatggtgcgaacaaatcccaggctatattttagtgggtaatatcgaatccaag
gacagaattgcgggtccacgtaggccaaatggaaaggcagattgcgaggtgataatgatg
tgtggtttgcctgcggcgggaaaaactacctgggcaagaaagcacgccgccgaccatcca
gataaactatacaatattttagcagttcataaattggttgagaaaactggggacgttgct
ctgtcagataaagagcaaaacatctgtcagcgagaaattattattgacagatgcaatcgc
gcactcgatcaactgatcaacgtagcaagtggtagaagacgtaactatatattagaccag
aagagcaacatatattcctctgtacaaaggcgtaaaatgcgaaatttctgcggctatcag
cggaaagcgatcgttgttataccaacagacaaagagtacaatcaacgtttgtcaatgcac
aatacaatcgaaggaaattctttagtgtccaatcttacggaaatgaaagcaaatttcact
gcaccttcggtgggagaatttttcgatgtagtggagtggaccggtcttggtgaggaagaa
gctaagaaactcgttgagaaatataacaaggaaggcaaagacgctggattcagtcaacaa
ccaccgacaaaacaaccgcgtcttgataagactgagagtatcaaagaaacgcgtgattct
cgaaataaccgagacactcgagatcgaagaaataattatcaagatagaggtcgcaattct
tcttggcgtggttctaatatgggaggttggagaggagagagaccgcaaagaggtggttac
atgaggcacactggtggttacggaccccctcctgttccatggagattacgaggacgaggt
ggatctgcaatggcacgatcagacagaagaatgggtggaattgataggagatcaggaaat
gacagaaatcgatctgttgcacctaggcaaggtggttggggctctatgagtgggaattat
caaggatcgcaacagtccagttggggtcaacaggataattggtcaggtagtcaagctaca
ggaaattggaaccaacaaagtggctggggacaacaacagtggggaggcggttggaaagga
tatagtcaaggcacatacggtcagacaggatataatcaacatggatacggcaacggtaat
tggaatagctggaatcaacagtattacaacaaccagtattggggtcaacaacaacagagt
gggcagactaccgcagctagcggccaggctgagattacaagcgaaatggttgcaacgact
tctacgagcgcaggatatagttactcacagggataa
DBGET
integrated database retrieval system