KEGG   Atta colombica: 108685253
Entry
108685253         CDS       T11098                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
acoc  Atta colombica
Pathway
acoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108685253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108685253
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108685253
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     108685253
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 108685253
NCBI-ProteinID: XP_018045444
UniProt: A0A151I4H9
LinkDB
Position
Unknown
AA seq 272 aa
MEPNQENDQGGLRVDGRRALELRQIRMRMGVFGQADGSAYIEHGNTKVLAAVYGPRQSRS
SASRNSTKAIINCQYSMAVFSFTSGERKRRPRGDWKSQERSAQLRHAMEAIIHLELYPRS
QIDVFVEVLQVDGSDYCASVNAATLALIDAGIPIKNYAIGCSITLVNKLSVEDEDKTLTT
GVLDANYVEECSPGVTLSVVALAGTNNDIEVDGNGLIVVAHGAGQRLHLSRLETLKQRVL
QGCQDIKNILDHGVRHHLTANLLPSFLHNSLD
NT seq 819 nt   +upstreamnt  +downstreamnt
atggagccaaatcaagagaatgatcaaggtggacttcgcgttgacggcagacgagcgttg
gaattaaggcaaatccgtatgcggatgggagtattcgggcaggccgatggtagtgcatat
atagaacatggcaacacgaaagttctagcagcggtgtacggtcctcgtcagtcaagaagc
agtgcatcaaggaatagtacaaaggctatcataaattgtcagtacagcatggctgtgttt
agttttacctctggcgaacggaagcgaagacccagaggagattggaaatcacaagagagg
tcggcacaattacgtcatgccatggaggctataatacacttagaactatatccacgctct
cagatcgatgtcttcgtagaagttctacaggttgacggcagtgattattgtgcatccgta
aatgctgcgacgcttgcattgattgatgccggaattccaatcaagaattatgccatcggc
tgtagcataactcttgttaataagctatcggtagaagatgaagataaaacgttaaccaca
ggagtattggatgcgaactatgtagaggagtgttcaccaggagttactttgtctgttgtt
gcattagcaggaacgaataatgatattgaagtggatggaaatggtttgatagtagtagca
catggggcaggtcagagattacatttgtcacgtttggaaacactcaaacaacgtgtgtta
caaggttgccaagatataaagaatatattagaccatggcgtgaggcatcatttaactgca
aatctgttgccttcatttctgcataattcactcgactaa

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