Atta colombica: 108685300
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Entry
108685300 CDS
T11098
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
acoc Atta colombica
Pathway
acoc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108685300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108685300
Membrane trafficking [BR:
acoc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
108685300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_22
AAA_14
AAA_16
nSTAND3
AAA_18
AAA_lid_3
NPHP3_N
NACHT
RuvB_N
TsaE
AAA_5
Mg_chelatase
AAA_33
TIP49
AAA_17
DUF815
RNA_helicase
AAA_19
AAA_28
AAA_7
ABC_tran
FtsK_SpoIIIE
NTPase_1
Viral_helicase1
IstB_IS21
NB-ARC
AAA_23
AAA_29
AAA_2
Parvo_NS1
MazE_antitoxin
PduV-EutP
Sigma54_activ_2
G-alpha
ResIII
TK
SRP54
PEX-2N
AAA_3
MobB
ATP_bind_1
TrwB_AAD_bind
DUF4642
Motif
Other DBs
NCBI-GeneID:
108685300
NCBI-ProteinID:
XP_018045512
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MQHERFVVKYIAANNCFAHLSAIWLRRLETKENAIEILHNGKKYYLSCITRVNNEETLCI
GATFARSLNIQEGDEVLVSSVKNIPSLSSVQIAPHTTSDRELLELQMERVQSSLLSQVRI
VAKGQPLVAWISKFSSVTFIAEDSEPKFTYGLLEEFTEVHVLDAIASATIKDEVVKKKEV
NTKIGNSLAKILPYFAKKKDHRNSRDNAANYALLQSFRSRSAPRVFRVYPLPDFRSFDQL
NAHDMILQGPCHVLIPRSCAPKNIRPSGIMMCKVKKVPENRQYVNVTSTNFLKDDSLKPP
QELVVRIYILEDILDKCSASLDREYFDLNSIHSCIYVSASLKITLGLKVGSRVIMQMIEG
DESPPRPLSVNIFPFNQSVTPEVIANYVKLHSRHEPLLLNSGTTILLEDGERCVIRMSPA
DCDYAMIDGKDAEDLVVLVSSADPSDGKIPQNCPEPNSRMEKISTRYIEGILENCEIALD
LSLGLRRAVDFWYDRENILICGAMGSGKTTICKKLIQCYCEAPCFVHTHVIDCRSLKGKK
VETMQKIITSVMNECVYYQPSILFLDNLESITNVSLNDEENTIDAMNASRITDMLIKTVM
QYQECHYISIVATCVNVSKIGSRLRPVRGVQFFRTVLQIPNLEKVDRIDILRLTLEDKLC
VPGDMNWNYYGNKTEGWMPQDIVDLAEKARFVTWKRHATERLKVPIIMTEEDVNTALKDF
TPMSLQGIQLYKSSGHSWSNIGGLANTKTSLMEILQWPLKYPEIFKNAPIKLQSGVLLYG
MPGTGKTMLAKAIASECGVNLISIKGPELLSKYIGVSEESVRNIFERALRAKPCVLFFDE
FDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEDREGVAVVAASSRPDLLDPALLRPGRLDK
CLHCPLPNELEREEIFTVLCNAQNIDTAMLDLKILVQLSDGFTGADINAVITSAKLSAFE
DALATATDGKVSETAIKVTQTHLVESVKLTRPSLSTAEKLKYTKIYARFSKGDNFTKDVL
KNQKATLA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgaacgtttcgttgtgaagtacattgcggcgaacaattgcttcgcacatctg
tctgctatctggctgcgccgtttggaaactaaggaaaatgcgatcgaaatattacacaac
ggaaaaaaatactatctttcttgcattactcgcgttaataatgaagaaacattatgtatc
ggagcaacattcgcgagaagtttgaacattcaagagggagacgaagtacttgtgtcctct
gtgaaaaatattccttcgttaagcagcgttcagattgctcctcacacaacaagcgatcgc
gagcttttggaattacaaatggaaagagtacaatcgagtctcttgagccaagtgagaatc
gtcgcgaaaggacagccactcgtggcatggatctcaaagttttcctccgtgactttcatt
gcggaggattcagagccgaaattcacttatgggctgctcgaggagtttacagaagtgcac
gtgcttgatgcaatcgcaagcgcaacgataaaggatgaggttgttaagaagaaggaggtt
aacacgaagataggcaattctttggccaagatcttgccttacttcgccaaaaaaaaggat
catcgcaattcgagggataatgccgcaaattatgcgttactgcaaagctttcgcagcaga
agcgcgcctcgcgtgttccgtgtgtatcctttgccggacttccggtccttcgaccagttg
aatgcacatgatatgatcctgcaaggtccctgtcatgttctgattccgaggagctgtgcg
ccgaaaaacataagaccgagcggaataatgatgtgtaaagtcaaaaaagtgccggaaaat
cgacagtatgttaatgtcaccagtacaaatttcctaaaggatgattctctcaagcctcca
caagaacttgtcgtgaggatttacattctcgaagacatattagacaagtgctctgcgtcg
ctagacagagagtatttcgatctgaattcgatccattcttgcatttacgtgtcagcgagt
ttgaagatcactttaggattgaaagtcggaagcagagtgatcatgcagatgattgagggg
gatgagtcaccgccgagaccgttgtcagtgaacatttttcccttcaatcaatcggtaaca
ccggaagttatcgcaaattatgtgaaactccattcgagacacgagccattgttgcttaat
tcgggtacgacgattttactcgaggatggcgaacggtgcgttatacgaatgtcgcctgcg
gattgcgattacgcgatgatagatggaaaggatgcggaagatttggtcgttcttgtttcg
tctgcggatccgagcgacgggaaaattcctcagaactgtcctgagccaaattcgagaatg
gagaaaatttccacaagatatatagagggtattcttgaaaactgtgaaatcgccctcgac
ctcagcttgggtttgcgaagagcagtggacttctggtatgatcgggaaaatattctgatc
tgcggcgccatgggttctggtaaaacgaccatctgcaaaaagctaattcagtgttactgc
gaggcaccatgtttcgtacatacgcatgtgatcgattgcagatcgctgaagggtaaaaag
gtagaaacaatgcagaagatcattacatccgttatgaacgaatgcgtgtattatcaacca
tccatcctgttcctggacaatttggagagcattaccaatgtgtcattaaatgacgaggaa
aatacgatagatgcgatgaacgcttccagaattactgatatgctgatcaaaactgttatg
caatatcaagaatgtcattacatctcgatcgtcgctacttgtgtcaatgtgagcaaaatc
ggttcgagattacggccagttagaggagtgcagttttttaggactgtcttgcagattccg
aatctcgaaaaggtggatagaatcgatattttgcgattaacgctcgaggacaagttgtgc
gtgcccggagacatgaattggaattactatggaaacaagaccgaaggctggatgccccag
gatatcgtcgatctggcggagaaggcgcggttcgtcacatggaagcgccatgcgacagaa
agattgaaagtgccgattatcatgacggaggaagacgttaacaccgcattgaaggatttc
acgccgatgtccttgcagggcatacagttgtacaaaagtagcggtcactcttggtccaac
atcggcggactggcgaatacgaagacttctctcatggaaattttgcagtggccgctcaag
tacccagagatcttcaagaatgctccaataaaactccagagcggtgtcctgttgtacggg
atgcccggcactgggaaaactatgctggccaaagcgatagccagcgagtgtggtgtgaat
ttaatcagcatcaagggtccagaattattgtcgaagtacataggcgtcagtgaggagtct
gtcagaaatatattcgaaagagctcttcgcgccaagccgtgcgttttattctttgatgaa
tttgatagtcttgcaccaagacgcggacatgacagtactggagtcaccgatcgagtggtg
aaccaactactgacgcaacttgacggggtcgaagatcgcgaaggggtggcggtcgtggca
gcatcttcaaggcccgacttattagatccggctcttttgagaccaggacgtctcgacaag
tgtttgcattgtcctttaccgaacgagttggaaagagaagagattttcacagttctatgc
aatgctcaaaatatagatacagccatgctggatctgaaaatattagtccagctctctgac
ggatttactggggctgacatcaatgcggtgattacttcggcaaaattatcagcgtttgag
gatgccttggcgactgctacggacggcaaagtcagtgagactgccatcaaagttacgcaa
acacatctcgtggagtctgtcaaattgacgagaccatctttgtccactgctgaaaaattg
aaatataccaagatttatgctcggttttccaagggagacaacttcacgaaggatgtgttg
aagaaccagaaggcgacattggcttaa
DBGET
integrated database retrieval system
