Atta colombica: 108685324
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Entry
108685324 CDS
T11098
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108685324
Transcription factors [BR:
acoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108685324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
108685324
NCBI-ProteinID:
XP_018045544
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MCDGSFTETLRSMQGMTGTSPPGSAGVGHMGVGLMGGSSPLGSAGKKVPVEHIKRPMNAF
MVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEHPDY
KYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGSMGQAAMGSYYTPAAAYGSLSAAS
MAAAAAAAAQQSAASGLMSSLGSTPPIPVDSMTMKYSMEPDKYRAAYMPPSTLAMSMYPD
PKYLDSSNPKTYLDRTYLDAKAYFEQSKLYMDQKPTIGEYNRPNYEPNKLYEESSPSSVV
GGNGPARSPPAESPDTSKQHERTEQGSSSASSTSTSSAASPGALPYPYPASVQASGLLTP
QMAQYGGYQMAPASGNESFRRPLVIL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacggctccttcacagaaaccttgcgtagtatgcaagggatgacgggtacgtcg
ccaccgggtagtgccggtgtcggtcacatgggggtcggcctcatgggggggagtagtcca
ctcggctcggcaggcaagaaggtgccggtggaacacatcaaacggccaatgaacgccttc
atggtatggtcacgactacagcgacggaagattgcacaagagaatccgaaaatgcacaac
agcgaaatctccaagcgactaggtgcagaatggaagctccttacggaggatgagaaacgt
ccattcatcgatcaggcgaagaggttacgtgcacaacacatgaaggaacatcctgattat
aaatatagaccgcgaaggaaacccaaaactttgcgaaaagaaggctatccttatagtatt
ccatacccaagtgttcccatggacgctcttcgagcaggaatggctggtagcatgggacaa
gctgcaatgggctcctattacacccccgccgcggcttacggctcgctctcggcggctagc
atggctgcagccgcagcagcggctgcacaacaatcggctgcatctggtctcatgtctagt
ctcgggtcaactcctccgataccggtggactcgatgaccatgaaatattctatggagcct
gacaaatatcgcgctgcctatatgccgcccagcactctagcaatgagcatgtatccagac
cctaagtacttggattcttctaatcccaagacttatctagaccgtacttacttagacgcg
aaggcatacttcgagcaatcgaaactgtacatggatcagaaacccaccattggagaatac
aatcggccgaactacgagcccaacaagctctacgaggaatccagtccaagtagtgtcgtt
ggcggaaatggacccgcaagatcaccgcccgcggaatcgccagacacaagcaagcaacac
gaaagaacagaacaaggctcgtccagcgcgagttcgacatcgacatcatcggccgcgagt
cccggtgctttgccgtatccgtatcccgcatcagtccaagctagtggcctgctgactccg
cagatggctcaatacggtggataccaaatggcaccggcatcgggaaatgaatcttttcgg
cgaccgttggtcatcttgtga
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