Atta colombica: 108685327
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Entry
108685327 CDS
T11098
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-21-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108685327
Transcription factors [BR:
acoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108685327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
108685327
NCBI-ProteinID:
XP_018045547
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MLRLLCVRVKFVTISNGSSKLCYEELIPIKMLKHSLDQEQISYNPVSVNLNSDADSNYGF
DIHSSSLHSMYHPFSNAMTPDVIDASDIRQRTPAQQEIHIKRPMNAFMVWSREKRKLISQ
ENPKMHNSEISKMLGAMWKKLTEEDKIPYIEKSKRLRIQLLKDHPDYKYRPRRKAKRVSL
DQSIAVGLSSRHCHSFPISPYGTPIINPSAMAHALPYYPYPRSARFKLRDSDALPTSMVS
ADGNNNASLDVNSLYQFYSSMAPAVGNPTLAQHHLNSFFPTSHHTLGTNSLHSHLILPSM
SESTGSDKSNTYDANPSQSTSLSMHSPEALTPCSSSLDPDWYRYNPAPFSR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtttgttatgtgtgcgtgttaagtttgtaacaatctcaaacggatcgtctaaa
ttatgttatgaagaacttataccgattaagatgttaaaacatagtttagatcaagaacaa
atatcgtacaatccagtctcagtcaatttaaactcggacgcagattcaaactacggattc
gacatacattcatcgtctttgcattcaatgtatcatccgttctccaatgcaatgacacct
gatgttatagatgcgagtgatattaggcaacggacacctgcgcaacaagagatacatatt
aagaggcctatgaacgcatttatggtgtggtcccgtgagaaacgaaagttaatttcccaa
gagaatccaaagatgcacaattcagagatctcgaagatgctcggcgcaatgtggaagaaa
ctcaccgaggaagataaaattccttatatcgagaagtcgaagcgtctgcgtattcagctc
ttaaaggatcatccggattacaagtatcgacctcgaagaaaggccaaaagagtgtcactg
gaccaatctatagccgtgggcttatcttcgagacattgccacagttttcctatatcgcct
tacggtacgccgatcatcaatccttcggccatggctcatgcattgccctactatccgtat
cccaggtcagcccgttttaagttgagagactcagatgcgttgcctacgtcaatggtttca
gctgatggcaacaacaacgcgtccttggatgtcaatagcttatatcaattttattcttcg
atggcaccggcagttggtaatccgacattggcgcagcatcacctgaactcgtttttcccg
accagccatcatacattaggaaccaacagtctccattcccatctgatattgccctcgatg
tccgaaagtacaggaagcgataaatccaacacttacgatgctaacccatcacaatctact
tcattatcgatgcattcccctgaagcactgacaccgtgtagttcttcgttggatcctgat
tggtacagatacaatccggctccattttcacgatga
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