Atta colombica: 108685391
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Entry
108685391 CDS
T11098
Name
(RefSeq) homeobox protein SIX1-like
KO
K15614
homeobox protein SIX1
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108685391
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108685391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
VPS13_N
HTH_3
Motif
Other DBs
NCBI-GeneID:
108685391
NCBI-ProteinID:
XP_018045641
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MMAYGGTAGNGGAMGPTSGGGGSGSADVLGTAAGDYSPQSTPTPLTGHSTTAGSVENAYT
PGATGAASYSPQDSPASSAGGSGNGQLPSFGFTQDQVACVCEVLQQAGSVERLSRFLWSL
PACTRLHRHESVLKAKAIVAFHRGQFKELYRILESHTFNPNNHPKLQALWLKAHYIEAER
LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYANNPYPSPREKREL
AESTGLTTTQVSNWFKNRRQRDRAAEHSGQREDKTHGGGLGDSSSESGDETKRQSGQQQQ
QQQPSSCAVQQQQQQQQQMVDHQQTSSMYQLPPPASVSVSSPHSYHQGHSSTLSHPHMQH
HDTSSESGDDKRNLHHQLQHHIQVGTHGHGLVHPAATLPPPPPSCAQQKSQLDYMQYYPQ
DYLIGTPTSADLQKSLPHTATSMQMGAIAPSMGGLSPMGPSTMLSNTMQSVNTMNTMSMN
GMGMGAYQGMGSMGMSTSHASYHSGLVLGEYHSL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctacgggggcaccgctggtaacgggggcgcgatgggcccgacgtccggcggc
ggcggcagtggtagtgcggacgtcctgggtaccgctgccggcgactacagtcctcagagc
acccctacacctttgaccggacactcgacgacggccggctcggtggagaatgcttacaca
cccggcgcaaccggggcggccagctacagcccccaggatagcccggcgagctctgccggg
ggcagtggtaatggccagctgccgagtttcggtttcacgcaggatcaagtagcgtgtgtc
tgcgaggttcttcagcaggcaggctccgtggagaggctcagccgatttttatggtctctg
ccggcatgcaccaggttgcaccggcacgagagcgtgctcaaggccaaggcgatcgtcgcc
ttccatcggggtcaatttaaggagctctacaggatcctggagagccacaccttcaatccg
aacaatcatccgaagttgcaggctctctggctcaaggcccactacatcgaagccgaaagg
ctgcgcggaaggcccctcggcgcagttggaaagtaccgagtgcgtcgtaagtttccgcta
ccgcgcacaatctgggatggcgaggagacgtcttattgcttcaaagagaagtccaggagc
gttctgagggattggtacgccaacaatccgtatccgtcgccgcgcgaaaagcgagaatta
gcggagagcaccggccttaccaccacgcaagtcagtaattggttcaaaaacaggagacag
agagatcgtgctgccgagcatagtggccagagggaggataaaactcacggcggaggtctc
ggggattccagcagcgagagtggcgatgagacgaagcggcaatccggccagcagcaacag
caacaacagccgtcttcctgcgcggttcaacagcaacagcagcagcaacaacaaatggtg
gaccatcaacaaacctctagcatgtaccaacttccgccaccagcttccgtctccgtttcc
agtccgcattcgtatcaccaaggccatagctcgaccttgagccatccacacatgcagcac
cacgacacgagtagcgaaagcggcgacgacaagagaaacctccatcatcagttacagcat
catatccaggtgggcactcacggccatggtttagtccatcctgccgccactttgccacca
ccaccgcctagctgcgctcaacaaaaaagtcagctagattacatgcaatactatccacag
gattatctaatcggaacgccaacctccgcggatctacagaagtccttaccgcacactgca
acgtcgatgcagatgggtgcgattgccccttctatgggcgggttgagcccaatgggcccc
tcgacgatgctatccaacaccatgcaaagcgtcaacaccatgaacaccatgtcgatgaac
ggcatgggcatgggcgcttatcaaggcatgggctccatggggatgtccacgtcgcatgcg
agttaccacagcggcctcgtgctgggcgaataccattcgttgtga
DBGET
integrated database retrieval system