Atta colombica: 108685494
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Entry
108685494 CDS
T11098
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108685494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108685494
03036 Chromosome and associated proteins [BR:
acoc03036
]
108685494
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108685494
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108685494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
108685494
NCBI-ProteinID:
XP_018045802
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MDEVDNAQIIVIADDVCRRAGIATTWISSNRFGIHAYKHVDKYSQDIRSQFAPCDARVHF
LRPEIILFSPLLRKLVNESNGIFLSIQKLKSSSGDIRPELLKHSKQYRSILRACVENLQE
ILPKESLSEEKTMLENFLTIFYQVECLWHLTEILYVDVVPGDVVLPQLLEWISFHFPSRE
LAASKILSQKTMCADLENINYWEAIMGCAFHGKLNLVCRLLALHSKADHSAFITADNIIR
TMPVYNVYGGYSVNEFIMRWKHWQMDLCSNLETNCFVIDNNLEMLMKLIAGDESVLWEYS
MYTEAWYELLAAKLFYSAPCCKQLELSRYANSVAERWQANRHLDRVILALMENDLYQVIK
EIQYMSDNGWFAAHLMDLLYKCGKLNILSKEKTNVTAQLHESLILEYGTTLMSHRSLWQC
GASYLIHCSTQGLARLEILLQSLPTGTEARINKIIDVARDNNMPHVVTSICKIQGMKSIR
QGRLGNALTWALKAHDGNFITYIADQFLKHYAEYGELECRDLLENLGSCMLASDRLTFLG
KYCEFHHMYGMDEYREAASLLVSLLVSNLTPKYFWSILLTDAIPLLEAEDVIFSSNDCYE
LLRCVEAHGDDPKFQDKISIFRIGVARNLARALSLEGCQAEH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtcgacaatgctcaaataattgttatagcagatgatgtttgcaggagagca
ggtatcgcgacaacctggatcagcagcaatagatttgggatacatgcatataaacatgtg
gataaatattcgcaagacatcagaagtcaatttgcaccttgcgatgctagagtacatttt
ctccgaccagaaatcatattattctcaccacttttacgtaaattggtaaatgagagcaat
ggaatctttctgtcaattcaaaagcttaaatcttcctctggcgacattaggccagaactt
ctcaaacatagcaaacaatatagatctatattgagagcctgtgttgaaaacttgcaagag
atattaccaaaggaatcattatcagaagagaagactatgctagaaaattttctcactata
ttttatcaagtagaatgcctttggcatttaacggaaattctttatgttgatgttgtacca
ggcgatgttgtgctaccacagttattagagtggatcagctttcattttccctcaagggaa
ctggcagcatcaaagattttgtctcagaaaactatgtgtgccgatttagaaaatataaat
tattgggaagctataatgggctgtgcattccatggtaaattaaatctagtttgtcgtctt
ctggcattgcacagtaaagcggatcattcagcatttattactgcggacaatattatcaga
acaatgccagtttataatgtatatggcggatattctgtaaacgaatttattatgcgatgg
aaacactggcaaatggatctttgctcaaatctagagaccaattgctttgttatagataac
aatctggaaatgcttatgaagttgatagcaggagatgaatcggtgttgtgggaatattcc
atgtatactgaagcatggtatgaattgctggcagcaaaattattttattcagctccctgc
tgcaaacagctggaactttcacgttatgcgaatagcgttgctgagagatggcaagctaat
aggcatttggatcgtgtaatccttgctttaatggaaaatgatttataccaagttatcaaa
gaaatacaatatatgagcgataatggctggtttgcagcccacctaatggatctattatac
aaatgtggaaaattaaacattctcagcaaagaaaagacaaatgtgactgcacagcttcat
gaatctctcatattggagtatggcaccacactgatgagccatcgctcattgtggcagtgt
ggtgcaagttatttgatacattgctccacacaaggcttggctagattagaaattttgttg
cagtcgctaccaacaggcacagaggcgagaatcaacaaaattattgacgtcgcgcgagac
aataatatgccgcacgttgttactagtatatgcaagatccaaggaatgaaaagtataaga
caagggagattgggcaatgctcttacatgggcgctcaaggcacacgacggcaactttatc
acatacatcgcggaccagtttttaaaacattacgcagaatacggagaattagaatgtcgc
gacttgttagagaacttgggttcctgcatgttggctagcgacaggctcacatttttggga
aagtattgtgagtttcatcatatgtacggaatggatgaatatcgcgaagcggcgagtctg
ttggtgtctcttttagtttcaaatttgacgccgaagtatttttggtccatcttgctcaca
gatgctataccgttgttagaagcggaagacgtaatcttttcttcgaatgattgctacgag
ttgctacgttgtgtggaggcacatggcgacgatccaaaatttcaagacaagatttctatc
ttccgaataggcgttgcacgaaatctagcaagagctttaagtctagaaggttgccaggcc
gaacattga
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