Atta colombica: 108685537
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Entry
108685537 CDS
T11098
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108685537
Membrane trafficking [BR:
acoc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108685537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
108685537
NCBI-ProteinID:
XP_018045876
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
MSSINSIDSHATLQWDMMELARHLRQERLFVNSEQQNLQTLNERVLYVSSQLAQQAWITA
QQRVNLNRLIVARPDCTPASCCLRANALENSHFIDAYKYLRYQACLSYGEFLGALRKSPK
LLASCLVEGDRAIPESMQTIVQCLAAGLYGSCILPEDKSLVLQLLRHLMLLQIIPSDNPR
RLLRHGTCAFSRFYSIFHESLFSAKLFLTAALHNPIVQLLMEDEMFLDIDPDKAPIRFPP
AERLKKFGKEGTAEYQAKLQRYRLWTVNSLYRITQRFIINIRETIHCFPTSVCWLVRQMA
GLLSKNGNVDPKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPISYVARFNLMQVGQILQ
MLSLQKYQSIDNKVIDLYKKFEKDSVSSIIDSMLDGATEELEEEPMIIDNNKFQGLSRSA
ALFTESELNSLITFLNTIVGDNNGETILHNSFDRKQLAEMLSQLPSGLLHNNKLSNEYLE
TPSKRSVAVGKGKGRGIRMTTFSPNITNESGEEINGTAVPEEETVDKNSHDVLVIPFGPT
IGESVGLLSEQKVLCMELQSGMENGPVTLNLPDDTSNEHPRQENSNVERIETQEKRTRFS
LSHDEVLFEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLSDMVSANVSGRGTP
NISGRDTPSSQITEGDDGRAAGEARQLDLPPPNIPTKQSRSEIDDKFCKFEIKKLIEGDE
TVSMVSDTWSTDVLASDSEIVEQQDRILLAVPPEQVAPVLPAEPTPTMLDISETASEAWS
TDVLASDSERLTEVDTDDTASVARSDDTARSEIEIESRADSEGNEETLQSATPCPDGSSI
SFSTISGIREDSGIGTSIVHPSPTTSPLPSSSNVTGRGGTKSDYRRSTMEYVDKNANNIS
NMDYTKPLRDDRLVHLIDKLQIDNGKQVERQAPAHNHIAAAAVAPALLLANHISAPVLPE
KSQNGDSKTEELDNCITSVGDTVGRLSTASLTSSSSSGSEPRVKSNISASDLPTPTVNGT
CDSVDGSIPNFSKPNASTGAIPKSISFDMTAERGDKELLDDDQKNKRGFFGKLKMTLRNR
RGKAIRGADDRCFDREAGGDGVDMCRHRLRRIMSEDVTSSGNVAGDTTDDILAKYRRKPS
AASDTASIESNQSRTKEVEDERLSIDPNNVELSYAFADAKRKLRMVLSTADLQHIPWNTS
ERHCWSQKENELVAFLQLQLAEAINLQDRALIAHLHETLRCVRLFNDDGCRKLFKSLRED
YQKRSPYIAYLIRCRQGLLSTLAHLDRLCVRVKCDRDAINNHLVSVCVRVFLEKREAFLL
RFCDEFKKLTLADEKQDLVDTFLGKVHAEMDNDPIWQSASANQLDLARVVVERTVMARVY
HNALYPNGDGDVYRDQLLHDHIKKLAKVVTPNHKDLRIPKVYHYECPWPWAQAELAVISA
YKTPRDKLQCVFRCATTIMNLLSMASERGIPAADDLIPVLVYVIIKTNPPSLLSTVQYVD
SFYGNRLEGEEQYWWTQFCSAIEFIKTMD
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgattaatagtattgattcccacgcgacattacagtgggatatgatggaattg
gctcgtcatttgcggcaggaaagactatttgttaattcagaacaacagaacttgcagact
cttaacgaacgagtcttgtatgtttcgtcacagttagcgcagcaagcatggataactgct
cagcaaagagtcaatctgaatcgcctgatagtggcaaggccagattgtactccagcatca
tgttgcctaagagcaaacgcattggaaaattcacattttatcgatgcgtacaagtacctg
cgctaccaagcatgtttgtcctatggagaatttttgggtgcactacgaaagtcacccaag
ctcctcgcttcgtgtttggtcgaaggggatagagccatcccagaatcaatgcagacaatt
gtgcagtgcttagctgctggattatacggtagctgtatattgccagaggataaaagttta
gtccttcagctgctgaggcatcttatgttgctgcagataattccatctgacaatccacga
agattgcttaggcatggaacgtgcgcattttccagattttactcaatctttcatgaaagc
ctgttctccgcaaagcttttcttgacagcagctttgcataatcctatagtgcagttactt
atggaagatgaaatgttcttggacattgatccggataaagcgcctattagatttccacct
gcagagagattgaagaaattcgggaaggaaggcacagccgaatatcaagcgaagttacag
cgttatagactgtggacagttaattctttgtatcgcattacgcagagatttatcattaat
attcgtgaaacaatacattgctttcctacgagtgtttgctggcttgtaaggcaaatggca
ggacttctgagtaagaatggaaacgtagatccaaaagaagtgcatgccatgtgcactgat
cttgtattcacatacttcatttgccctgctatagttaatcctgagccttacggcattacc
gatgcaccgataagttatgttgcaaggttcaatctaatgcaagttggacaaattttacaa
atgctttcgctacaaaagtatcaaagtatcgataacaaagttattgatctttataaaaaa
tttgagaaggattcagtgtcttccataatagattctatgttggatggtgcgacagaagag
ttggaggaggaaccaatgataattgacaataataaatttcaaggcctgtcacgatccgca
gcattgtttacagaaagtgaactgaattccttaattacatttttgaacacgattgttggt
gataacaatggagaaacaatattgcataattcatttgatagaaaacaattagcagaaatg
ctgtcgcaattaccttcaggtttactgcataataataaactaagtaatgaatatttagaa
acacctagtaaacgaagtgttgctgtagggaaaggaaaaggacgtggtataaggatgact
acattctcaccaaatataacaaacgaaagtggagaagaaattaacggcactgcagtccct
gaagaggaaactgtagataaaaattctcatgatgtgctagttataccttttggtccaaca
attggagaatccgtagggctactcagtgaacagaaagttctatgcatggaactccaaagt
ggtatggaaaatggacctgttactttgaatctccctgatgacacctctaatgaacatcct
agacaagagaatagcaatgtcgaacgtatcgaaacgcaagagaagagaactcgattctca
ctctcacatgacgaagttttgttcgaaggatcgattggcaatacgtccgataacttggaa
gctgtgtcagaagctgcttccaatcacagtgtcgcttcttctttagaattagaaacagaa
gatcaaaacgataacctctcagacatggtatctgctaatgtatcgggtagaggaactcct
aatatatcaggtcgagatacaccatcatcccaaattactgaaggagatgatggacgcgct
gcaggtgaagcaaggcagttggatttgccaccacctaatatcccaaccaaacaaagtcga
tccgaaattgatgacaaattttgtaaatttgagattaaaaagcttattgaaggagatgaa
actgtttctatggtatccgatacttggtctacagatgtgttggcctcagatagcgaaata
gttgaacaacaggatcgaatactgcttgctgttccacctgaacaggttgcacctgttctg
cctgctgaacctacaccaactatgttagacattagtgaaactgcttctgaagcctggagc
acagatgtattagctagcgattcagaaagattaactgaagtagatactgatgacactgct
agcgttgctagatctgatgatacagccagatccgaaatcgaaatagaaagccgtgctgat
tccgaggggaatgaagaaacgcttcaatctgcaactccatgtccggatggctcaagcatc
agtttttcgacaatttcagggattcgggaggattctggcataggaacttcaatagttcat
ccatctccaacaacatctccattaccgtcgtcgtcaaatgtaacaggtcgtggtggaacc
aaatctgattatcgacgtagtacaatggaatacgtagacaaaaacgctaacaatataagc
aatatggattatactaaaccgttacgggacgacaggctggtccacttgatagataaactt
caaattgacaatggtaagcaagttgaacgtcaagcacctgcgcacaatcacatcgctgcg
gctgcagtcgcaccagcgttgctattagctaatcatatttctgcgcctgttttgccagag
aagtcccaaaacggtgattcgaaaacagaggaattggataactgtataacatcagtcgga
gataccgtaggccgattaagtacagctagcttaacatctagcagtagttccggatcggaa
cctcgtgtgaaaagtaacatttcagcatcggatttaccaacaccaacggttaatggcact
tgtgattcagtggatggatcgattcccaatttttctaagccaaatgcatcaacgggagct
attccaaagagtataagttttgacatgactgctgaacgtggcgacaaggaattgttggat
gatgatcaaaagaacaaacgcggtttctttggtaaattaaaaatgacattgagaaatcgt
agaggtaaagcgattcgcggggcggacgacagatgttttgatcgagaagctggtggcgac
ggtgtcgatatgtgcaggcacagattacgcaggattatgtcggaagatgtaacatcatct
ggtaatgtcgcgggcgatactaccgatgatatattagcgaaatatagaagaaaaccaagc
gcagctagtgatacagcttcaatcgaaagcaatcaatctcgtacaaaagaggtggaagat
gaaagactttcaatcgatccaaataatgtagaactatcttatgctttcgcggatgctaaa
agaaaattacgcatggtacttagtactgctgaccttcaacacattccatggaatacatcg
gagagacattgttggtcgcagaaagaaaacgaactagttgcatttttgcaactgcaatta
gcagaagctataaacctgcaggatagagcattaatagctcaccttcatgaaactttacgt
tgtgtgcgtctatttaatgatgatggatgtaggaaactcttcaaatctcttcgagaagac
tatcaaaagcgatccccttatatcgcgtatttaattagatgtcgtcaagggttgctgtcg
acgttagctcacttagatagattatgcgtgcgagttaagtgcgatcgagatgctatcaat
aatcatctcgtatctgtttgcgtaagagtatttttggaaaaaagagaggcttttctcctg
cgtttttgcgatgagtttaaaaaacttacgttggctgatgagaaacaggatcttgtggat
acttttctaggaaaggtccacgccgaaatggacaacgatccgatttggcaatcggcgagc
gctaaccaattagatttggcgagagtcgtagtggaaagaaccgtcatggcacgggtatat
cacaatgcactctatccaaatggagatggagatgtatatagggaccagcttcttcacgat
cacattaaaaagttggcgaaggtcgtaactccaaatcacaaggacttacgtattccaaag
gtttatcattacgaatgtccctggccatgggcacaggctgaattggctgtgatatcggcg
tataaaactcctagggataagttgcagtgtgtatttcgttgcgcgactaccatcatgaat
cttctttccatggcgtcggaaagaggcatacctgctgccgacgatcttattcccgtgctg
gtctatgtcataatcaagactaatccaccgtcgttactatcgactgttcaatacgtagat
agtttttacgggaatcgattagagggcgaagaacaatattggtggacgcagttctgttct
gcgatcgagtttattaagacaatggattaa
DBGET
integrated database retrieval system
