Atta colombica: 108685587
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Entry
108685587 CDS
T11098
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
acoc Atta colombica
Pathway
acoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108685587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108685587
Enzymes [BR:
acoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108685587
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
108685587
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108685587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_3
Cdd1
HHH
DUF4332
HHH_2
DUF6305
HEPN_AbiU2
Autophagy_act_C
DsrD
Motif
Other DBs
NCBI-GeneID:
108685587
NCBI-ProteinID:
XP_018045936
UniProt:
A0A195BJ08
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MGKRKATGNANNPNHDLCDFLMELADYERNVSKNVYKYNAYRKAAGTLSALTERVKSGEE
AKKLPGIGVKIAKKIDEFLQTGKLQKLEDIKKDDINIAISLLARVSGIGPAKAKELVEAG
IKTLEDLKKHQDKLTHHQKLGLKYFDDFEKKIPRAEIAQIEKILKNAIKELNSAYLITIC
GSYRRGKEESGDIDVLITHPDYISKVKDGKKKAVSLKTIIECLEKKKLITDTISLGSTKF
MGICQLPEDKSKPFRRLDIRLTFHDQYYCAILYFTGSDLFNKNMRAHALEKKYTLNEYAL
KRLTIEGRPGEAEKITSEEDVFKFLGLPYKDPKDRNI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaaaggccacaggcaatgcgaacaatccaaatcatgacctgtgtgatttt
ttgatggaactggcagattatgaacgtaatgtcagcaagaacgtttacaaatacaatgca
tatcgcaaagctgctggaacattaagtgctctgacggagagagttaagagtggagaagag
gcgaaaaagttacctggaataggagtaaaaatcgcaaagaagatagatgaatttcttcag
actggaaaactgcaaaaactagaagatatcaagaaagatgatattaatatcgctattagt
ctattagctcgggtgtctggcataggtcctgctaaagcaaaggaattagtggaagctggt
atcaaaactttggaagatcttaagaagcatcaagacaagcttacgcatcatcagaaactg
ggattgaagtattttgatgactttgagaagaaaataccaagagcagaaattgcacagata
gagaagatattgaagaatgctatcaaggaactaaacagtgcttatctcataactatctgt
gggagttacagacgtggcaaagaggaaagtggagatatcgatgttcttataactcatcct
gattatatatcaaaagtaaaagatggaaaaaagaaggctgtatcattgaaaacaattatt
gagtgtcttgaaaagaaaaaattgattacagatacaatatctcttggttctactaaattt
atgggaatatgtcagttaccagaagataaaagcaagcctttcagaagattagacatacgt
cttacatttcacgatcaatattattgcgccatactttatttcactgggagtgatctgttc
aacaagaatatgagagctcatgcattggaaaagaaatatactttgaatgaatatgcatta
aagcgtcttacaatcgaaggtcgtccaggagaagctgaaaaaattacatcggaagaagac
gttttcaaattcctaggtttaccctataaagatccaaaagacagaaatatataa
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