KEGG   Atta colombica: 108685666
Entry
108685666         CDS       T11098                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
acoc  Atta colombica
Pathway
acoc03030  DNA replication
acoc03410  Base excision repair
acoc03420  Nucleotide excision repair
acoc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108685666
   03410 Base excision repair
    108685666
   03420 Nucleotide excision repair
    108685666
   03430 Mismatch repair
    108685666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acoc03032]
    108685666
   03036 Chromosome and associated proteins [BR:acoc03036]
    108685666
   03400 DNA repair and recombination proteins [BR:acoc03400]
    108685666
DNA replication proteins [BR:acoc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108685666
  DNA Replication Termination Factors
   ELG1-RFC complex
    108685666
Chromosome and associated proteins [BR:acoc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108685666
DNA repair and recombination proteins [BR:acoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108685666
  Check point factors
   HRAD17(Rad24)-RFC complex
    108685666
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 RCF1-5-like_lid AAA_lid_RFC1 AAA_16 nSTAND_NTPase5 Viral_helicase1 Rad17 Mg_chelatase AAA_11 nSTAND3 AAA_assoc_2 RuvB_N AAA_18 AAA_19 AAA_24 MeaB MipZ ABC_tran AAA_28 AAA_5 NTPase_1 AAA_7 AAA_25 RNA_helicase IstB_IS21 AAA_3 DNAX_ATPase_lid ATPase_2 AAA_29
Other DBs
NCBI-GeneID: 108685666
NCBI-ProteinID: XP_018046053
UniProt: A0A195BW97
LinkDB
Position
Unknown
AA seq 355 aa
MAGDGVVVEDEPMETDYEILPSTSNNNVKIKEKYGKFGNLPWIEKYRPQIFSDIVGNEDT
VSRLSVFAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVV
RNKIKMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEE
IIEPIQSRCAMLRYGKLTDAEVLAKVLEVCEKENVSYTDDGMEAIIFTAQGDMRQALNNL
QSTYNGFNHVNAENVFKVCDEPHPLIVKDMLDDCIKGDVSKACSVMDHFWKMGYSAEDIV
SNVFKVCKNHTMDERLKLKFVKEIGITHMGVVEGINSLLQLHALVARLCRACMSK
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcaggtgacggtgttgtcgtcgaagatgaacccatggaaactgattatgagatttta
ccgtccacaagcaacaataatgtgaaaatcaaggaaaaatatggtaaatttggaaattta
ccatggattgaaaaatatcggcctcaaatcttttccgatattgttggtaatgaggatact
gtatcaagattatctgtttttgctcagcatggaaatactccaaatattatcatcgctggc
ccacctggagtgggtaaaactaccacgattttatgtttggctcgtactttattgggacca
gcattcaaagaagctgtacttgaactaaatgcttcgaatgagagaggaatagatgtagtt
agaaataaaataaaaatgtttgctcagaaaaaggtgaatcttccaaaaggaaaacataaa
atcattattttagatgaggctgacagtatgactgatggtgcgcaacaagcgttacgtcga
acaatggaaatttacagccacacaactagatttgctctagcgtgcaacaatacagaggag
attattgaacctatacaatcaagatgtgctatgttaagatatggaaagttaacggatgct
gaagtcttagccaaagttcttgaagtttgcgaaaaagaaaatgtttcttatacagatgac
ggcatggaagcaataatatttacagctcaaggtgatatgaggcaagctctaaataatttg
caatctacatataatggatttaatcatgtaaatgcagaaaatgtatttaaagtctgtgat
gaacctcatcctttgattgtcaaagatatgttagatgattgcataaagggagatgtttct
aaagcatgctcggtaatggatcatttctggaaaatgggttattctgcggaagacatagtt
agtaacgtatttaaagtttgtaaaaatcatactatggatgagagattaaaattgaaattt
gttaaggaaattggaataacacatatgggagtagtagaaggtattaacagtttattacag
ttacatgctctggtggcaagactttgtcgcgcatgtatgtcgaaataa

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