Atta colombica: 108685837
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Entry
108685837 CDS
T11098
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
acoc Atta colombica
Pathway
acoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108685837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108685837
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
GTPases
108685837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
DUF2846
Motif
Other DBs
NCBI-GeneID:
108685837
NCBI-ProteinID:
XP_018046309
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MRFISIEKLNEIQTDATHIRNICILAHVDHGKTTLADSLVASNGIISNKLAGKLRYLDSR
PDEQIRGITMKSSSITLYHVYNEMDHVINLIDSPGHVDFSSEVSTAVRLSDGAVILVDVV
EGVCPQTRSALSIAYVEGLKPILVLNKVDRLITEMKLTPLDAYVRLTQVLEQVNAIMGEL
FASDVMEREEREETVASTWDKVNERDLADWQSVLEEIDDSNLYFSPEQGNVLFTSAIDGW
GFSIMEFAKIYSNKLGFSEKVLRKTLWGDFYINNKMKRIMKGAQEKAKKPLFVQLILDNI
WVLYDIIVIRKDKDKLPTIAEKLNIKLTTRDLRHTDSKAQLQAVCSQWLPLAQNCLDMVC
EKVPAPHNLTHEKIERLISGNNDFSALPLETQQLKRAFLSCNPSLEAPIIVFVSKMFPVE
KDMLPENRPKSLTPEELAQRREIVRQKHAERLEQKTCTAIEDHEDTKEDTPDMIISNNIN
HEDVIEDKSDGTLVAFARVYSGTIKIGDEVFVLGPKHNPSIALEREKAGEKINPSYVLKD
LKPGRHITKVTVNKLYILMGRELEAVNKVPAGNVFGIGSLEEHVLKTATLSTTIACPSFT
ELTSLAVPILRVALEPKHPNDLPKLINGLKLLNQADACAIVHIQETGEIVLSTAGEVHLE
RCLEDLKLRYAKIDINVSDPIVPFRETVVPPPKLDMVNEAIEKKAAEVNLEVWTSNRQCR
FEIDTKPLPENITKLLEKNANLIKLLDSYCDRYTKENGEHEAIAGENQLNERFMSDKKQK
EAKVFKNELETAFLEAGWKDNIMDKIWSFGPRKCGPNILLNETDYTQKKFWEQQNTNVDS
RAAYDNSIVNGFQLATLAGPLCEEPMMGVCFVLKKWEIFETPQSDSGGQSQGHLGGQLMS
ACKEACRRIFSLRHPRLMTAMYSCSVLVNSDVLGRLYAVFGKRQGRIVSTESAYGFGGQF
RVLATLPVLESFHLARELRTQTSGLASPQLVFSHWEVIEQDPYWVPSTEEEYLHFGEKAD
SDNRAKCYMDAVRRRKGLPVDSQLVTHAEKQRTLSKNK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttatcagcattgagaagcttaacgagatacaaactgatgccacacatatcagg
aacatatgtatcctagcgcatgtggatcatggaaagactaccctggcggattctcttgtt
gcaagcaatggcatcatatccaataaactggctggcaaacttagatacctggatagtaga
ccagatgaacagatacgtgggattacaatgaaatctagctccataacgctatatcatgta
tacaacgaaatggaccatgtgataaacttgattgactctccaggacatgtggacttctcc
tctgaagtttcaacagcagtcagattgtcagacggagctgtcatcctagttgatgtagta
gaaggcgtatgtccccagacacgtagtgccttatctatagcctacgtcgagggtttgaaa
cctattttagtacttaataaagttgaccgattgatcacggaaatgaaattgacaccattg
gacgcttacgtacgtttgacacaagtcttggaacaagtaaatgccatcatgggagagtta
tttgcgagcgacgtgatggaacgtgaagaacgcgaggagacggtcgcatctacgtgggac
aaggtgaacgaaagggatctggccgattggcaatctgtattggaagagatagatgattca
aatttatacttctctccggaacaaggaaacgttcttttcactagtgcaattgatggctgg
ggatttagtatcatggaattcgcgaaaatttattcgaacaaattaggatttagcgaaaag
gttctacgtaaaacgttgtggggagatttttatataaataacaaaatgaagaggatcatg
aagggagctcaggagaaggctaagaagccacttttcgttcaattgattttggataatatc
tgggtattatacgatattatagtgatacgaaaagataaagataaattgccgactatagct
gaaaaattaaatattaaattgacaacgcgcgatttgaggcacacagattcaaaagcacag
ttgcaagccgtttgctcgcaatggcttccactggcgcaaaattgtctcgatatggtatgc
gagaaggttccagcaccgcataatttaactcatgagaaaatcgagcgattgataagcgga
aacaacgacttctctgctttacctcttgaaactcagcaactgaaaagagcattcttatca
tgcaatccatcgttggaagcgccgattatcgtattcgtatcgaaaatgtttccagtggag
aaggacatgctgcccgaaaacagaccgaagtcgctaacaccggaagaattggcacaaaga
agagaaattgttcgacagaagcatgcagagagactggagcaaaaaacttgtactgccatt
gaagatcatgaagatactaaggaagatacacccgatatgataatctccaataacataaac
catgaagatgttatcgaggataaatcggacggcacattagtagccttcgccagagtatat
tcgggaactataaagattggagatgaggtattcgttttaggaccaaaacataatccttct
attgctttggaacgcgagaaagcgggtgagaagataaatccttcctacgtgctgaaggat
ttgaagcccggcagacatattacgaaggtgactgtaaataaattgtacattcttatggga
agagagcttgaggctgtaaataaggtaccagcgggtaatgttttcggaattggtagccta
gaagagcatgttttaaagaccgcgactctttcaacgacaattgcttgtccttcgttcaca
gaattaacttctctcgcagttcctatattgagagtagccctggagccgaaacatcccaac
gacttgccaaagctcatcaacggtttgaaactattgaaccaagcggatgcctgcgccatc
gttcacatacaagagactggtgagatcgtcttaagcaccgcaggtgaagttcatctggaa
agatgcctggaggatctcaagctgagatatgctaaaatcgatattaacgtgtctgatcca
atcgtgccatttcgcgaaaccgtagtgccacctccaaaactcgatatggtgaatgaggcg
atcgagaagaaggcggcggaagtcaaccttgaagtctggacgtcaaatcggcagtgtcgt
tttgagatagacacgaaacctcttccggaaaatataacaaaattattagagaaaaatgca
aatctgataaaattgttggatagttactgtgacagatacacaaaagagaatggggaacac
gaggctattgctggcgagaatcaactcaacgagagattcatgtctgataagaagcagaag
gaagcaaaagtattcaagaacgaattggagacagcttttctcgaagcgggatggaaggat
aatataatggataaaatatggtcatttggcccacgaaaatgcgggcccaatatcttattg
aacgaaactgattacacgcagaagaaattctgggagcagcaaaacacgaatgtcgattct
cgagcagcatacgataatagtatagtcaatggattccaacttgctactctggctggtccc
ttatgcgaggagcctatgatgggcgtctgcttcgtgttgaagaagtgggaaatttttgag
actccacaaagcgattccggtggccagagccagggacatttgggcggtcaattaatgtcg
gcgtgtaaagaggcttgtcgacgaattttcagcctgcgacacccccgactgatgacggcg
atgtatagctgtagcgttttagtcaactccgacgttcttggaagattgtatgctgtgttc
ggtaaaagacaaggccgaatcgtatctacggaaagtgcttacggtttcggtggacaattc
agagtattggccactctaccggttctagagagcttccatctcgcaagagaattacggacg
caaacgtccggattggctagtccgcaactagtttttagtcattgggaagtaatcgaacag
gatccttattgggtaccatccacggaggaagaatacctccattttggtgaaaaggcggac
agtgataatcgagctaaatgctacatggacgcggttcgtcgaagaaaaggccttcctgtg
gactcccaattagttacgcatgctgaaaaacaacgcactctttcgaaaaacaagtga
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