Atta colombica: 108686051
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Entry
108686051 CDS
T11098
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
acoc Atta colombica
Pathway
acoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108686051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108686051
Enzymes [BR:
acoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108686051
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
HECT type E3
108686051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
ARM_ARMC5
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
108686051
NCBI-ProteinID:
XP_018046600
LinkDB
All DBs
Position
Unknown
AA seq
2088 aa
AA seq
DB search
MADQQDQLSSGGSVEKASASADTSKSRGKSSSSSSSYRKRQSTGAIPDSVEEKRRRQTTS
DPQTSQVDSNTPHTHSIDSSKGEGRIRGERRSHGAGLESYSETDWRSHHKIHQVSYNSSS
STRVRSAARTSLPESSLTPTDCVASRTRSRTPQNPQALTQGTSSYDLSLSSGYGSRKTST
YSSLVASASATSITSHPSTSRGKGGQRMSECLEGFVSAVKALFPISTQTYHQEDSKSHGG
ATCSATSSSTSSQVLGVKSSIRVGNAASNSVESGGGALAHDGAGTSGITSTATANPPVSA
TVSANPTHPHSTHKHLLRSRAKATGEQPKELPSSNKTSGKHHKKDTTTGSCSSSRHRSSS
RVRKPVVESGSGGLGSVMSGNDSISATSVSSSIPSSQLVSTTGEEESASTATSATDRVIQ
NFDFLLAREAGGGPSGMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLN
RSMGASSAAKAQQLLAGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALIN
LLGIEHNFAIMTHACRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALA
MLSRRHSKTILHAGGVSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVVDSLPLL
TSRLTNQDKKSVECVCQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSTNN
FITVLRMLSVISNRCPDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPRTPQEWFEIT
CLIEELMPPLPTDGIFSVNSLLERTSNQQETVQWEWRDERQCSHPFSTIDSRIIEMAFQN
GEDEICLTSLGRTYTIDLTVMKQINEDIGMTRSIFRRVNANPTEGKSPTCSSSMDVVPPV
IETNEWLVSFIRTLFSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVS
SHIAGMLASQDLRIVIGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSP
PKCPSGTSLPSPQPGPSNTPLSSTTMLSSSSATSPVVSPSSNGNILFGTIASSCQYKPNI
SASLEPHRTELNNSVEETSAPQSAHLRIGDVLKKKRQNKKGRFSRLGGTTTPQQTQQPES
LFTGFTPKNNRFLGNLNPAKWGRKSSSSSTSNDKRDSSSSTNLSKPPSNPSLTGGNRDKA
KAWVREQAAQFLARYQDDAPCSHPALTVLARLTAAIQRLQSNELDEMLSALTELRDIVLE
SDISPFEMNYSGLIKALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIMDLNPGAF
GALVTKLNSCVAQLEQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLK
QWKGGTVKIDPLALVQAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGP
PKHKLQFLIGDIVLPFNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYR
PVPEEDAATSPKSGSSSQGNSRKGKGKSTKISSKRKEDSLWLEGTVPLQHCPLAPYLSPT
LPPSVTITDASLDGLCLLRLLHALNRHWGILFPHLKSMSLLSPQDFINNKIAAKASRQLQ
DPLVIMTGNLPSWLQQIASVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDS
QERVTPRLERRKRTISRTDILKQAELVIQDLASNKALLEVQYVNEVGTGLGPTLEFYALV
SKELQRADLDLWHGNSNPTENGYVNSSHGLFPTPIPWNTKVSHLAKLKTKFKFLGKFMAK
AIYDSRMLDLPFSLTFYRWLLGEEHTLTLADLTYVCPDVYRTLSKLQEVVRKKEAMEKDQ
TLRPHEKAQLIEALDLDTCPISELGLVFELPGYENIELRKGGSEISVTIYNLDQYIKLVV
HWFLYEGVFRQMEAFREGFESVFPPLQLKLFFPEELEAVFCGHAQTGGQWDVKTLAECCR
TDHGYTPDSRAIRFLFEVMSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFD
PSMKTDDFLPSVMTCVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagttgtcatcaggggggtctgtagagaaggccagtgcttca
gcagacacctctaagtcaagggggaaaagctctagtagctcgagtagctacagaaaacga
caaagtactggtgcgatcccagatagcgtggaagagaagaggcgtagacagaccaccagt
gacccgcagacatctcaagtggacagtaatacaccgcacacgcattcgattgattcttcc
aagggagaaggcagaatcagaggtgaacgaagaagtcatggagctggcttagaatcttat
tcagaaaccgactggaggtctcatcataagattcaccaagtcagttacaacagtagtagc
agtacaagagtgcgtagtgcagcaagaacgagtctgccagagtcaagtttaacacctacc
gattgtgtggcatcgcgaactcgttcccgtacaccacagaatcctcaagcattgacacag
ggaactagcagttacgatctgtcactgtccagtggatacggtagccgaaaaacaagtacc
tacagcagtttggtagcttcagcgagtgctacatcgattactagtcatccatccacatcg
agaggaaaaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgctgtcaaa
gcactttttccaatatcaacacaaacctaccatcaagaagattcgaaatctcacggcggt
gcgacctgtagcgcaacgagtagcagcacgagtagtcaagtcctgggtgtcaagtccagc
atcagagtgggtaacgcagcaagtaactctgtggagagtggtgggggggcgttggcacat
gacggggcaggcacgagtggcatcacttcaacggccactgccaatccacctgtgtctgcc
accgtttctgccaaccctacacaccctcattctacacacaagcacctgctacgctctcgc
gcgaaagctaccggtgaacagccgaaggaattgccatctagcaacaagacttcggggaaa
catcacaagaaagatactacaacgggttcctgttcgagttcgagacatcgctcttcatca
cgcgtgaggaagccggtggtggagagcggctccggtggattgggtagtgtaatgtcaggc
aatgactctatcagcgctacctccgtatcatcttctattccgagcagtcagttagtctca
accacaggtgaggaggagtcagcatcaactgcgacatccgccacagatcgcgtcattcaa
aatttcgatttcctacttgcacgcgaagctggtggaggaccatctggaatgtcaggaaca
acaggtgacagcgaaagcgacgatggagaagttggacgattgcaagctttattggaggct
agaggtttaccgcctcatgtgttcggtgcattaggaccgcggatgcaacacttacttaac
agaagcatgggcgcaagttccgctgctaaagcgcaacaacttctagccggcttacaagct
gttgaagacgagggagaacaattgcaggccgtcatgaacatgggagagattcttgtaatg
ggcaacgaggatactttaaccggttttccggtcaaacaagtggttgcagctttaattaat
ttattggggattgaacataattttgcgataatgacccatgcgtgtcgtgcccttacgtat
atgatggaggcgctgccacggtcgtccactgttgtagtggatgcagtgccggtattctta
caaaaactcgaatcgatcgagtgcatggacgtagctgaacagtgtttgacagcattagcc
atgttgtcacgcagacatagcaaaacaattttacatgcgggtggggtttcagcctgtttg
aaatttgttgatttcttcaacatcacagcacaacgtgcagcgttaacaattaccgcaaac
tgctgtcaaaaccttcatcctgatgattttcatttagtagtggatagtttgccattatta
acgagcagattaacgaatcaagataaaaagagcgtcgagtgtgtgtgtcaagcattcagt
cgattagttgacagtttccaacatgatcctgtaatgctgcataaaattatcaatgctgaa
ctcttacagaatctacaacagctgctcatgattacgccgccggttaacagcactaacaat
ttcataactgtattacgaatgctctctgtgatatcaaatcgctgtcccgacttggcgcaa
ttgttgctgcaacaaaatatagctttcacattaagttatcttttaactggatctctggaa
gttaaaacggaagacgtagagttggtgccgcgtacaccgcaggagtggtttgaaattaca
tgtttaatcgaggagcttatgcctccattaccaacagatggaatattcagtgtaaatagt
ttactcgaaaggaccagcaatcaacaggagactgtccagtgggaatggcgtgacgaaaga
caatgttcccatccgttcagtactatagactctagaattatcgagatggcgtttcaaaat
ggcgaagatgagatatgccttacctccttaggacgaacttacactatagatctgactgtg
atgaaacaaattaacgaggatataggaatgacaagaagtatatttcggagagtaaacgct
aatcccactgagggaaagagtccaacttgctcatctagtatggatgttgtgcctccggta
attgaaacgaacgaatggctagtgtcttttattcgaactttattctctgtactatatgaa
gtttatagcagttcagctggacccgctgtaaaatgcaaatgcctccgagctcttcttcgt
atggtgtattatgcttcaactgatttacttaaagatgttctaaagaatcaagtggtttcg
tcacatatagctggtatgttagcgtcgcaagatttacgtatagttatcggagctcttcaa
atggcgagtatcttgatgaaaagattgccacaagtatttggggttcattttcatcgcgag
ggcgtactgcatcaagttcgtcaattagcagatcccgaagtacctctcggtgtttcacca
cctaagtgcccttctggtacatcattaccaagcccacagccaggtccgtctaatacacca
ctttcttccaccacaatgttgtcttctagtagtgccacatctccagttgtctctccatct
tcgaatggcaacatattgtttggcacaatcgcgtcgtcgtgccagtataaaccaaatatc
agtgcttcgctggaaccacacagaacggaattaaacaacagcgtagaggaaacaagcgca
ccgcaaagtgctcacttaaggattggtgatgtactgaagaaaaaacgacagaataagaag
ggtcgtttctccagattggggggcaccaccacaccgcaacaaacacaacagccggagtcc
ctgtttactggttttaccccaaagaataatcgatttttgggaaatctcaatccagccaaa
tggggtcggaaatcgtcctcgtccagtactagcaacgacaagagagactcgagctcatcc
acgaatctgtcaaaaccaccgagtaatccaagcttaactggtggaaatcgggataaggca
aaagcatgggtgcgtgaacaagcagcccaatttttggcaagataccaagatgatgcacct
tgctcgcatcctgccctaacagttcttgctcgattaactgctgcgatacagcgattgcaa
tcaaatgaattggacgaaatgttatcagcactaacggaattacgggacatagttctcgag
agcgatatatcgccgtttgaaatgaattacagcggccttatcaaggctctgttgaactac
ctcactaccacagatgcaccgggtaaccgttacgaccgtcttcgtatgttttggaaattg
tttgcggagtctactatgcaacagaacaacgatattatggatcttaatcctggggcgttt
ggtgctttagtaacgaaattgaatagctgcgttgcacagctagaacaattcccggtgaaa
gttcacgatttacctgcgggttctggcgctggccgtggcggtaccagtgctctgaaattc
ttcaatacgcatcaacttaagtgtaatcttcaacggcatccggactgtaataatttgaag
cagtggaagggcggtactgtaaaaatagatccgcttgcattagtacaggccattgagcgt
tatttgatggtacgtggatatggcagaatacgggacgctgattcgatggtcagtgatgac
gacaatagcgaagatgacattgatgatactctggcggcagttgtgataagccaaggaccg
ccgaaacataaacttcagtttttaattggcgacatagtcctaccttttaacatgacggtt
tatcaagctgtcaggcaatttggatgttccggagtggatcactctgaggcagaggccgat
agtgaaccgccacttggacacgatgcggtatgggtgcaaacccatacgatatactataga
cctgtaccagaagaagatgccgcaacctctccaaaatcagggtcgagctcacagggtaat
agcaggaagggcaagggaaaaagtacaaagattagttcaaagagaaaagaagatagtctt
tggctagaaggcacggttcctcttcaacactgtcccctcgcgccatatctatctcccaca
ttaccgccctcggtaactatcacggacgcctctctcgatgggttgtgtcttttgcggctc
ttgcacgctcttaatcgccattggggcatattgtttcctcatctaaaaagcatgagcctg
ctatcacctcaggactttatcaataataagatcgccgcaaaagctagcaggcaactgcag
gatccactggtgatcatgactggaaacttgccatcttggttacaacagatagcgtctgtc
tgtccttttctctttccatttgagacgaggcagcttttgttgtatgcaacatcgtttgat
cgagatagagcactacaacgtctcttggattccgcgccagaactttcaggatcagacagt
caggagcgtgttacgccacgcttagaacgaagaaagagaactatctcgagaacggacatt
cttaagcaagcggagttagtgattcaagatttagcctctaataaggccttacttgaagtg
caatacgtcaacgaggtcggtactggtctcggtccaactctggaattctacgctctagtc
tctaaggaactgcaacgcgctgatttagacttgtggcatggcaattcgaatcctactgaa
aacggatatgttaattcctcgcacgggctcttcccgacgccaatcccatggaacactaaa
gtatcgcatctagcaaaattgaagaccaagttcaaattccttgggaaattcatggcgaaa
gcaatatacgattccagaatgttggatttgccatttagtttaaccttctatcgttggtta
ttgggagaggaacatactcttacattagccgacttgacatacgtatgtcccgatgtatat
cgcactcttagcaagctccaagaggtcgtgaggaagaaagaagctatggagaaggatcag
acgctacgaccgcacgagaaagcgcaattaattgaggctctcgatttagacacatgtccc
atttccgaactgggtcttgtgtttgaattaccgggctacgagaatatcgaattaaggaag
ggcggtagcgaaatatctgttactatttacaatttggatcaatatattaagttagtggta
cactggttcttatacgaaggagtattcagacaaatggaggctttccgggaaggtttcgag
tcggtatttcctccgttgcaactgaaactattcttcccagaagaactggaggcggtattt
tgcggtcacgcacaaaccggcggacaatgggacgtgaaaactcttgccgaatgttgtaga
accgatcatggttatacaccggactcacgggccattcgttttctattcgaggtcatgtcc
aaatacaacagcgaggaacaacgacagttcattcagtttgtcaccggttcaccgcgtttg
cccgttggaggtttcaaaagcttaacccctccgttaacaatagtgcgcaaaacctttgat
ccgtctatgaagacagacgattttctaccatcagtaatgacttgcgttaactacctaaaa
ctgcctgattataccactttggaaataatgcgggaaaagttgcggatagccgcgcaagag
ggtcaacactcgttccatctctcctag
DBGET
integrated database retrieval system
