Atta colombica: 108686096
Help
Entry
108686096 CDS
T11098
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108686096
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
108686096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
108686096
NCBI-ProteinID:
XP_018046673
LinkDB
All DBs
Position
Unknown
AA seq
2274 aa
AA seq
DB search
MMGILYEKRPLKRPRLGPPDVYPQELKQKEDELSLTNVKHGFMATTTQLTDESGTGRNYN
VTAAKVGAYFNAILAKKEELATMPDTGRKRQQINPKDNFWPVTARTKNGIEAWFKDLSGS
KPLVTLAKKAPNFNKKEEIFMMLCEYQVPMLRAAWFIKLSSAYTVAVSEAKIKKRQLPDP
TTEWTGTLIKFLKDQLSKLQEYYHMGNHVAASNNNNMTNNSCNNNGITGTNSSNSNSSSN
SSNNNSNNNSVNNNNNNNSSNNTSNGTGNNQPSTPTSSSQSVTGSTMNEEHKLALKQWHY
CVQLAKYMFEEGLLDRQELLQWILELLDKIRSSPSEDGILKLLLPLALQYLEEFIQSELL
ARRLAYLCCRKLAHMCNNVESNNNPQSPSITKNEVNGSKDTTVAVQGSLNLLTVAFNDYL
TCAHHRDVIYSLSTIIQVITLECPTALVWNSVGEGKAPSVLNGSPLDYLPCPPAALPCPP
ASSGNPTMKQLRIAQENIRARSQAAEGRWSCDKWQQSSAGTTTTKVLAALDALDRHSFDK
MDASNSLDTLYAKIFTPPPKDNSNERDTKTEYNPQQDSAVVEILCEWAVSAERWGEHRAM
AVAKLLEKRQSEATGETNDNDDKDSTCSNGSPPVLPIFQPLLMKFLDMDAPVLDNTSNQS
KAQFTNLVHLFSELIRHDVFSHDAYMCTLISRGDLIQGPVASKPGTPSNREPIDEDSLFP
GIDLKPTKLEVSDHGRTMDYDDSKIDDDLDKILQHIKEDQQNSMDAPDSPKEDALTGHGG
HESLDSKMPSSHSRHLLYTTHFPLPQDETCSQHDCNQRHVLLYGVGRIRDEARHVVKKMT
KEVCKLFGKKFSIDVAEGGKVKKHSRSEFNFEAVTMKFQNLSYFDQHVVTWQCATQVIEM
LNTFALAGSSYLPVHEHVAFLFDLMELALNIYGLIDVCIQILKELPEVEAQLTARNSQLV
RSYTTNLSLYIVGVLRRYHCCLLLSPEQTTAVFDLLCKVVKHVSNPSDCSSAERCVLAHL
YDLYSTCSLLKTKSHGVEAFSNAYPKIRAALYSTLQPTPSSHVYNSQFMVDVFTSPRRGG
KIEPQWARQLNETPANRYSFVCNAIVAVCSETDNDKLNDIAITCAELTACCNALNAEWLG
VLMALCCSSNSSAFYIDVLNQVDVQDLSIHNSLAIFTSILIARHCFSLEDFVVHIALPSL
VKTCNDGRGDIDIEVEAGARLTCHLLLRLFKTVECPQPALYSVSTSPHPLPSGNSRGYSI
KLSCDRHLLAAAHNNIRVGPVLAVLKAILVVGDATAAKQPPKKVDIPLSHSTKGGGPASV
GVGVGVSSSGPGELSISHILGTSDILGGGDDLGLDLAMSSSSSSAGMTTENVKGFSDFAH
HVLRQICSQEWVLERCLQNPEELCHQDMLLDNMLTPRQAQKLLHMICYPETPTEAFIDQK
THITNILENLEQWSLRMSWLDLQLMYKQFTPSSNELSQWLDTVAKAAIDVFQLNNTLSNK
SDKKSGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSKTAGRERGRSKSPSLFNHQP
FLSLVLTCLKGQDDQREGLLTSLHSQLSQFLNTSKEEKHIGSEDPKTREVLQDALQLRFS
LVGGVFDTIQRNTTATTDWAILLVQLVSYGVIDLNNNAELFTTVIDMLATLIHSTLVSDS
QSEKDENKKHYQNLMKKLKKELGDRNSSSIRFVRQLLPLPKLTMEVITCEPVGCLTDTKG
NKIAGFDSIDKKQGLQVCDSQRVSAWELLEGHKNPAPLSWAWFRAVRLERKPLTYQNAHK
LLRYHTHSQIRPASHYLDPPPLPPEDLEPDKKELEPGKADTPMSIDSPGRVGGSVGSTGV
GNVNTNGKGKAMRNKRHNRRAKGAATPTTPISQQMQQPPQLQQIAFGNQQAPVAQQPGMF
TGQPPQPQQQWYSNQQTHTPAQQYGYSQQLPPTPVGGPRYERPGMNNQSKQALSNMLRLR
LPSNQFMGSQQQPPTATPVAGPGAFQGMQRQFIRQQLRAQHGAPGINPQQGMFAAQQQQQ
QQQQQQQGIYAGIQQGMNQNYAGYGGQQMMQQQQQQQQQTSQQTQQQQQQQLLQQQQQQQ
QQQQQQGILNQQQSMMFPNQQQMMGPQRGQEYIPQQRMQPSAARPPYLQAPNVTMNAMGP
MGAGVQNQPAPPYRQSAGKPGAVGVTGVGTANVSLQQNQQFQQQQAINQRMRQQMLAMQQ
QQQQAQQQQAAQQQQQQQQGAAGGQQPTPQLVTHLQRHLSQPPQHSYQHQPPPY
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaatattgtatgagaaaaggccactgaagaggccgaggctgggtcccccagat
gtttaccctcaagaattgaagcaaaaggaggacgagctctcgcttacaaatgtgaaacat
ggctttatggcaactacgacccaactaacagatgaatctggaacaggcagaaattataat
gtcactgctgctaaagttggtgcatatttcaatgcaattctcgccaagaaggaagagctt
gcgacaatgcctgacactggtaggaagagacagcagatcaatcccaaagacaatttttgg
ccagtaacagcaaggactaagaatggcattgaagcatggttcaaggatctttcgggcagc
aagccgctagtcactcttgcaaaaaaggctccgaacttcaataaaaaggaagagattttt
atgatgctttgtgagtatcaagtaccaatgctgagggcagcttggtttatcaagcttagt
tctgcttatacagttgcggtctcagaagccaagataaagaagcgtcagttgcctgatcca
actacagaatggacaggcactctcataaaatttttgaaagatcaattgtctaagttgcaa
gagtactatcacatgggcaatcatgtagctgctagtaataataataatatgacaaacaat
tcctgcaacaacaatgggattactggaacaaacagcagcaacagcaacagcagcagcaac
agcagcaacaataacagcaacaataacagtgttaataataataataataataattcaagc
aataacacaagcaatggcactgggaataatcaaccatccacacctacctcgagcagtcaa
tctgtgacaggcagtacaatgaatgaagagcataaattagcgcttaaacaatggcattat
tgcgtacaattggctaaatatatgtttgaagaaggcttattggatagacaagaattgcta
cagtggattctcgaattgctagataaaattagatcttctccctcggaagatggcatattg
aagctcttattaccattagctctgcaatatttggaagagtttatacaatctgaattacta
gccagacgattggcatatttatgctgtcgtaaattggcacatatgtgcaataatgttgag
agcaacaataatccacagagtccgtccattactaagaatgaagttaatggtagtaaggat
actactgttgctgtccaaggatcattaaatctcttgacagttgcttttaatgattatttg
acttgtgcacatcacagagatgtaatttacagtttatctactataatacaggttataaca
ttagagtgtcccacagcattggtttggaatagcgttggtgagggaaaagctccatcagtt
ttgaatggatcacctttagattatttaccatgtcctcctgcagctttgccgtgtccaccc
gcgagttctggaaatcctacaatgaaacaactaagaattgcacaagaaaatataagagct
cgatcacaggcagcggaaggtagatggtcatgtgacaagtggcagcaaagcagtgctgga
acaacaactactaaagtattagctgcattggatgctcttgatcggcacagttttgataaa
atggacgcctctaattctcttgacactttgtatgcaaaaatctttacaccacctccaaaa
gataattctaatgaacgtgacacaaaaacagaatataatccacaacaggattcagcagta
gttgaaatcttgtgtgaatgggctgtgagtgctgaacgttggggagaacatagggcgatg
gcggttgctaagcttcttgaaaaaagacagagtgaagctactggcgagactaatgataac
gatgataaagacagcacatgtagtaatggaagtccacctgtacttccaatttttcaacca
ttgcttatgaaattcttagatatggacgcaccggtactcgataatacttcgaatcaatct
aaggctcaatttacaaatttagttcatctgttctcagaattaataaggcatgatgttttc
tcacatgatgcgtacatgtgtactcttatttcaagaggtgaccttatacaaggtccagtt
gctagcaaacccggaacacctagcaacagagaaccaatcgatgaagatagtctttttccg
ggtatagatttaaagccgactaaattggaagtatcggatcatggacgtactatggattat
gatgacagtaaaattgatgacgatttagataagatattgcaacatattaaagaagatcaa
caaaacagcatggatgcaccggatagtcccaaagaggatgcattgactggtcacggaggt
catgaaagtctcgattcaaaaatgccatcaagtcatagtagacatttattatacaccact
cattttccgctaccacaagacgagacatgtagtcagcatgattgcaatcagcgacacgta
ttgctttatggtgttggacgtatcagagatgaggctagacatgttgttaaaaaaatgaca
aaagaagtgtgtaaattgtttgggaaaaaattcagtattgatgttgctgaaggaggcaaa
gtaaagaaacattctcgaagtgaatttaattttgaagctgttactatgaaattccaaaat
ctaagttattttgatcaacatgttgtaacatggcaatgtgcaacacaagtaatagaaatg
ttgaatacatttgcattagctggttcatcttatttaccagttcatgagcatgtagccttt
ctattcgatttaatggaactagcattaaacatatatgggctaattgatgtttgtatacaa
attctgaaagaattaccagaagtggaggcacaattgacagctagaaacagtcaattagtt
cgaagttatactacaaatctaagtttatacatagtcggcgtattaaggagatatcactgt
tgtttgttattatctcccgaacagacaacagcggtatttgatttactctgcaaagtagta
aaacatgtatcaaatccgagtgattgtagttctgccgaacgatgcgtattagcgcattta
tacgacttatattcaacgtgttctctcttgaaaacaaaatcacacggagtagaagcattt
agtaatgcatatccgaaaattcgtgctgctctctatagcacattgcagccaacaccttcg
agtcacgtttataattcgcaatttatggtggatgtcttcactagtccacgaagaggtgga
aaaattgaaccacaatgggcgagacagttgaatgagacaccagccaatcgttatagtttc
gtttgtaatgcaattgttgcagtttgtagtgaaactgataatgataaattaaacgatatt
gctataacttgcgcagaattaactgcttgttgcaatgctctcaatgctgaatggttggga
gtacttatggcactttgttgctcttccaacagttctgctttttatatcgatgttttaaat
caagttgatgtacaagatttaagtatacacaattctttagctatatttacatcgatttta
attgcaaggcattgtttctctttagaagatttcgttgtgcatatagcattaccatcatta
gtgaaaacttgtaatgacggtcgcggagatattgatattgaagtcgaagcaggtgcacgt
ttaacttgtcacttattattgagactcttcaaaaccgtcgaatgtccgcaaccggcttta
tattcggtcagtacgagtcctcatccgcttccaagtggaaattcaagaggttacagcata
aaattgagttgcgataggcacttattagcagctgcacacaataatataagagtaggacca
gtactcgcggttctaaaggctatattagttgtgggagatgctacagccgctaaacagcct
ccgaagaaagttgatatacctttgagccattccactaaaggaggtggtccggccagtgtt
ggagtcggagttggagtaagcagtagtgggcctggtgaactatcaatcagtcatattttg
ggaaccagcgatattttaggaggtggcgatgatcttggccttgatctagcaatgtcttcg
tccagtagtagcgctggcatgacaactgaaaatgtcaagggattttctgattttgctcat
catgttttgcgtcagatctgcagtcaggaatgggtattggaaagatgcttacaaaatcca
gaagagctttgtcatcaagacatgctgttagataatatgctgacaccacgacaagctcaa
aaattattacatatgatttgctatcctgaaacgccaaccgaagcttttattgatcaaaaa
acacatattacgaatattttggaaaatttggaacaatggagtctaagaatgtcttggtta
gatttacagcttatgtacaaacaattcacgccaagctccaatgaactttctcaatggttg
gacacagttgcaaaagctgcaatcgatgtttttcaattgaacaatactttaagtaataaa
tctgacaaaaaatcaggttctatatggttagttgctccattagtctccaagttgccgagt
gcagtacaaggcagagttttaaaagtggcaggacaggtattagaatcaggcaattggtcg
aaaacagcaggacgcgagagaggtagatctaaatcgccttcactgtttaatcatcaacca
tttttgtcacttgtcttaacatgcttaaaaggtcaggatgatcaaagagaaggtttattg
acatctctacattcacaactttcgcaatttttaaatactagtaaagaggagaaacatatt
ggttccgaagaccctaaaactagagaagtattacaagatgctttgcaattaagattcagt
ctcgtcggaggtgtgtttgatacgatacaaagaaatacgactgctacgacagactgggcg
attctactagttcaattggtcagctacggtgttatagatttgaataataatgcagaatta
tttacaaccgttatagatatgctagcaacactgattcattccacgttagtatcagattcg
cagtccgagaaagatgaaaataaaaaacactatcaaaacctaatgaaaaaattgaaaaaa
gaattaggtgatagaaattcttcgagcattcgctttgtaagacaacttttaccgttaccg
aagttgactatggaagttattacatgcgaacctgttggatgtttgactgatactaaaggc
aataagatcgctggatttgacagcatcgataagaaacagggattgcaagtatgcgattct
caaagagtatcggcatgggaactcttagaaggtcataaaaatcctgcgccactttcctgg
gcttggtttagagctgttcgattggaacgcaaaccacttacatatcaaaatgcgcataaa
ctgttgcgatatcatacgcatagtcaaattcgtccagccagccattatttagatccacct
ccattaccaccggaagatctggagccagacaagaaagaattggaacctggcaaagcggat
actccaatgagtattgattcaccaggtcgagtcggcggcagtgtcggtagcactggagtt
ggtaatgtaaatactaatggtaaaggaaaagctatgagaaataaacgacataataggcga
gcaaaaggtgccgctacacctacgacacctatatcgcaacagatgcaacaaccacctcaa
ttacaacaaattgcatttggtaatcaacaagctcctgttgcgcaacagcccggaatgttt
actgggcaacctccacaaccccaacaacaatggtacagtaatcagcaaactcatacaccc
gcacagcaatatggatacagtcaacagttaccacctacaccagttggtggaccgcgctat
gagagaccagggatgaataatcaatctaaacaagctttgtcgaatatgttacgcttacga
ttaccctccaatcaattcatgggctcgcaacaacaaccaccaaccgctacaccagttgcc
ggaccaggcgcattccaaggaatgcagaggcaattcatcaggcaacaattgagagcgcag
catggagcacctggcataaatccacaacaaggcatgtttgcagctcagcaacagcaacag
cagcagcaacaacagcaacaaggaatatatgctggaattcaacaaggtatgaatcaaaat
tatgcgggatatggcggacaacaaatgatgcagcagcaacaacagcaacagcaacagacg
tcgcaacaaacacagcaacagcaacagcaacagttgcttcaacagcagcagcagcagcag
cagcagcaacagcagcaaggaatcttgaatcaacaacaaagtatgatgttccctaatcag
cagcaaatgatgggtccacaaaggggacaagagtatataccacaacaaagaatgcagcct
agtgctgcaaggccgccatatttacaggcgccaaatgtaacgatgaacgcaatgggacca
atgggcgcaggtgttcagaaccaacctgctcctccgtaccgacaatccgctggaaaacca
ggtgcagtaggcgtaacgggtgtaggtacggccaatgtcagcttgcagcaaaatcaacaa
ttccaacagcaacaagcgataaatcaacgtatgaggcaacagatgttggctatgcagcag
caacaacaacaagctcagcagcaacaggctgcacaacagcagcaacagcagcaacaaggt
gctgctggtggccaacaaccaacgcctcaacttgtgacacacttacagagacacttgagt
caaccaccacaacattcctatcaacatcaaccaccaccttattaa
DBGET
integrated database retrieval system
