Atta colombica: 108686290
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Entry
108686290 CDS
T11098
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
acoc Atta colombica
Pathway
acoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108686290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoc03041
]
108686290
Spliceosome [BR:
acoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108686290
Complex C
U5 SnRNP specific factors
108686290
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GFIT
Other DBs
NCBI-GeneID:
108686290
NCBI-ProteinID:
XP_018047006
UniProt:
A0A151I415
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MSIPPYLLNPNPWATMMAQQQAQIAAQVHAQAAAAHAQAAHHAHMQAIAGPPLPQMPKQP
EVLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPAEHIRKIIRDHGDMSSRKYR
HDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIA
QWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEEDES
VASWFYEHKPLVGTKYVNGSTYRRWNLALPQMATLYRLANQLLTDLVDQNFFYLFDPKSF
FTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNM
PHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPQIEDDEDFVLPGE
VQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVKV
RVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQ
YRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGK
GPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDL
ELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYV
KMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISP
EEAVAIFTTSVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREE
LGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLD
QYLWYEADKRRLFPPWVKPADTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKFEK
LYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAQY
YGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRFSA
DEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPR
STTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEITKE
RTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQE
LLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWS
KQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRL
TLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGK
LWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR
SGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ
KVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPS
LLADSKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLI
AIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYL
SSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIH
TSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIV
IKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL
HVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVASLT
QSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSNYE
TQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQ
IAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQPN
ELPQLSPQDISTHARIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNTD
KGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANPKE
FYHEVHRPAHFLNFSSLEDGDGVGADREDMFA
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgtctattccaccgtatttgttgaacccaaatccatgggccacgatgatggcccaacaa
caagcccagatagcagcccaagtacatgcccaggctgctgcagctcatgctcaagctgct
catcatgctcacatgcaggctatagctggaccaccattacctcagatgcctaaacaacca
gaagttttatctgaggataaacttcaggaaaaagcacaaaaatggcagcaattacaatca
aaacgatttgcggagaagagaaagtttggctttgtagatgctcagaaagaagatatgccg
gctgagcatataagaaagatcattagagatcatggtgatatgagcagtagaaaatatcgt
catgataagcgtgtttatttgggagcattaaaatacatgccacatgccgttatgaaactg
ttggaaaatatgcctatgccatgggaacaaataagggatgtaaaggtcttatatcatatt
actggagccattacttttgtcaatgaaattccttgggttatagaacctgtatacatagct
caatggggcactatgtggattatgatgagacgagaaaaaagagatcgtagacattttaaa
agaatgagattcccaccttttgatgatgaagaacctcctttagattatgcagataatgtt
ctggacgttgaaccattagaagctatacaaattgaacttgattcagaagaagacgagtct
gtggcatcatggttttacgaacacaaacccttggttgggacaaaatatgttaatggatct
acatatcggagatggaacctagcgttaccacaaatggccactctgtatcgtttggctaat
caattgttaaccgacttggtagatcaaaattttttttatctatttgaccccaaatcattc
ttcactgcaaaagccctaaacatggctatccctggaggaccgaaatttgaaccattagtg
aaagattcaaatgctgctgatgaagattggaacgaatttaatgacataaataagatcatt
atcaggcagcctatcagaactgaatacaggattgcgtttccttacttgtacaataacatg
cctcatttcgtgcatctttcatggtatcatgcaccaaatgttgtgtacataaagaccgaa
gatccagatttgcctgcattctatttcgatcccttaatcaatccaatttctcacagaaat
tcactaaagacgatggaaccacaaattgaagacgatgaagactttgttttacctggtgag
gtacaaccatttcttcaggaaacacctctttataccgacaacacagcaaatggaatagca
cttctgtgggcaccaagaccatttaacacacgttctggtagaacaagaagagctattgac
attccattagtcaagtcatggtacagagaacattgtccacctggacaacctgtaaaagtg
cgagtcagttatcaaaaactgttaaaatattttgtgttgaacgctctgaagcacaggcca
ccgaaaccgcaaaaaaaacgctatttattccgttcatttaagtctaccaagttcttccag
acaacgacgatagactgggtggaagccggtctgcaagtgtgtcggcaaggatataacatg
ttgaatctattgatacaccgaaagaatctcaactatcttcacttggattacaatttcaat
ctgaaacctgtcaagacgctcacgacgaaagagagaaaaaaatcacgttttggtaacgct
tttcatctgtgtcgtgaaatccttcgtttgactaagctcattatcgattctcacgttcag
tatcgattaaacaatgtggatgcctttcaacttgctgatggattacaatatatctttgca
catgttggtcaattgactggcatgtatcgatacaaatacaaattaatgcgacagattagg
atgtgcaaagatttgaaacatctaatctattatcgtttcaataccggaccagtcggtaaa
ggacctggctgtggattctgggcacctggctggcgtgtctggttgttcttcatgagaggt
atcactccattattagaaagatggctgggtaatttactgtcaagacaatttgaaggtcgt
cattcgaagggtgtggcgaaaacagtgacgaagcaacgagttgagtcgcacttcgatctt
gaattacgagcatctgtaatgcatgacatagtagatatgatgcctgaaggaataaaacag
aacaaagcacggactatccttcaacatctaagtgaggcctggcgttgttggaaggcgaat
attccatggaaagtgccaggtttaccaattccaatcgagaatatgatattgcgttacgta
aaaatgaaagccgattggtggacgaatacggctcattacaatcgagagagaattcgacgc
ggtgctacagtggataaaaccgtatgcaagaagaatcttggtcgtttgacgcgtctctat
ttgaaagctgagcaagaacgacagcataattacttgaaagacggtccgtatatatccccg
gaagaagccgtagcaatctttactacttcggtgcattggctggagtctcgaagattcgct
ccgatccctttcccaccattatcgtacaaacacgacacaaagctactgatattggctctg
gaacgcttgaaagaagcgtatagtgttaaatctagattaaatcaaagtcaacgagaagaa
ttaggattgatagagcaagcatatgacaatccacacgaggcactatctagaattaaaaga
catttgcttacgcaaagagccttcaaggaagtcggcattgaattcatggatctttatagt
catttgattcctgtgtatgatgtagagccgctcgaaaagatcacagatgcttacctcgat
caatacttgtggtatgaggcggacaaaagacgactattcccaccctgggtgaaaccagcc
gacacggaacctccaccactccttgtttacaagtggtgccaaggtatcaacaatctacag
gacgtgtgggatgtcagtgagggtgagtgcaatgtattgctcgaatcgaagtttgagaaa
ctgtacgaaaagatcgatctcacactgcttaacagactgttgcgtctaatagtcgatcac
aatattgccgattacatgacggcgaagaataacgtagtcatcaattacaaggatatgaat
cacactaacagttacggtattatcaggggattgcaatttgcatcttttattgctcagtac
tatggactggtattggatctgctcgtgttaggtctccaacgagctagcgagatggctggc
ccgccgcaaatgccaaacgacttcttgacgtttcaggatgtcgcctctgaaacggcgcat
cctattcgattgtactgtcgctatgtcgatagaatacatctattcctgcgcttctctgct
gacgaagcgagagatcttattcagcgttatcttactgagcatcctgatccaaataatgag
aacattgttggctacaacaataagaaatgttggccgcgagacgctcgtatgaggctgatg
aagcacgacgtgaacctaggtcgcgccgttttctgggacattaaaaaccgactaccacgt
tccaccactaccattcaatgggagaatagctttgtcagcgtctatagtaaagataatccc
aatttattgttcaacatgagtggttttgaatgcaggattctacccaaatgtagaacaact
cacgaggaatttacacatcgggatggcgtctggaatcttcagaatgaaatcacaaaagag
agaacagcgcaatgcttcctacgtgttgatgatgagagtttgcagcgtttccataatcgt
gtcagacaaatcttgatggcctcgggttcaactactttcacgaagatcgtaaataagtgg
aatactgcattaatcggtttaatgacttatttcagagaggcagtggtgaacacacaagaa
ttattggatctgctagtcaagtgtgaaaataagattcagacacgtattaaaatcggactg
aattccaaaatgccatcgcgttttccacctgtcgtcttttacacgcccaaagaattggga
ggtctgggaatgttatcgatgggtcatgtattaataccgcaatcagacttgagatggtcg
aagcaaaccgacgtgggcatcactcacttccgttcgggtatgagccacgacgaagatcaa
ctgattccgaacttgtatcgttatatacagccatgggaatcagaatttatcgattctcaa
cgcgtttgggcagagtacgccctgaaacggcaagaggccaacgctcagaatcgcagactc
actctagaagatctcgaggatagctgggatcgcggtattcccagaataaatacgctattt
cagaaggaccgacacacgctggcctatgacaagggctggcgcattcgcactgaattcaaa
caatatcaagtgttgaaacagaatccgttttggtggactcatcaacgtcatgatggcaaa
ctatggaatttgaacaactaccgaactgacatgattcaagcgctcggtggtgtcgagggc
atcttggaacatactctctttaagggaacttacttcccgacgtgggagggtctgttttgg
gagaaagcatctggtttcgaagaatccatgaaatacaagaaattgacaaatgctcaacgt
tccggtctcaaccagattcccaatcgtcgattcactctatggtggtcacccactattaat
cgcgccaacgtttacgtcggtttccaagtgcagcttgatctgacagggatattcatgcac
ggaaaaataccaaccttaaaaatctcgttgatccagatattccgcgctcatttgtggcaa
aaggtacacgaatccattgtgatggatctttgccaggttttcgatcaagaattggatgca
ctagaaattgaaactgtgcagaaggagacgatacatccgcgaaagtcttacaaaatgaac
tcctcatgtgccgacattctactattctccgcctataagtggaacgtgtctcgaccatct
cttcttgctgactccaaagatgtgatggataacacgaccacgcaaaagtattggatcgat
gttcaattgagatggggcgactatgactcacatgacatcgagcgatatgctcgtgcgaaa
ttccttgattatactacggataacatgtccatctatccatcacccactggtcttctcata
gccatcgatttagcatataatttacatagcgcttacggtaattggttccctggttgcaaa
ccacttatacagcaagccatggcaaagatcatgaaagcaaatccagccttgtatgtgtta
cgtgaacgtattcgcaaggcattgcagttatactcgtccgaaccgacggagccttatctc
tcctcgcaaaattatggcgaactcttctccaatcagatcatatggttcgttgacgacacg
aacgtgtatcgcgtaactatccacaaaacttttgaaggcaatttaacaacaaaaccgata
aatggtgcaattttcatcttcaatccacgcacgggacaactctttttgaaaattattcac
acttccgtttgggcgggccaaaagcgtctgggtcaattggccaaatggaagactgctgaa
gaagttgctgcgctgattcgttctctaccagtagaggaacaaccaaaacagattatcgtc
accagaaagggaatgttagatccactggaagtgcacttgttggattttcccaacatagtt
atcaaaggatccgagttacaattaccattccaggcatgtctcaaagtcgagaagtttggt
gatttgattttaaaggcaaccgagccacagatggtactattcaatctttatgacgactgg
ttgaagacaatctcatcttatactgcgttctcacgactgattctgatcttacgcgctctg
catgttaacactgagagaaccaaagttgtcctcaaacccgacaagactaccatcactgag
ccacatcatatatggccatcactgacggacgacgaatggattaaagtagaagtacaatta
aaggatctgattctagcagactatggcaagaagaacaatgtcaatgttgcatcgctcacg
caatccgagattcgcgatatcattttgggtatggaaataagtgctccatctgcgcaacgg
caacaaattgccgagattgaaaagcagactaaggaacagagccaattaaccgctaccacc
acgcgaacagtaaacaaacacggtgatgagattattactgcgactacgtccaattatgag
acgcagactttcagctctaagactgagtggcgagtacgtgctatctctgcaactaatctc
catctcagaacaaatcacatctatgtttcatccgatgatatcaaagagactggttatact
tacatcttacctaaaaatgtattaaagaaatttgttaccatttctgatttgcgagcgcag
atagctggttatttgtatggcatcagtccacctgacaatcctcaggtaaaagaaatcaga
tgtattgtaatggcaccgcaatggggaactcatcagaccgttcatttaccaaatacacta
cctaatcatcaatatttaaaagagatggagccactaggatggatacacacgcagccaaat
gagctgccacaactctcgccacaggacatatccactcacgctcggattatggcggagaat
tccatttgggacggcgagaagaccatagttatcacttgcagtttcacgcctggttcttgc
tctctcacagcgtacaaactaactccgagtggtttcgaatggggcaagcaaaatactgat
aagggcaacaatccgaaaggttatctacctagtcattatgagaaggtacagatgcttttg
tctgatcgtttccttggcttctttatggtgcctagtcaaggctcgtggaattacaatttc
atgggcgtgagacacgatcccaacatgaaatatgagttacaactagcgaatccaaaggaa
ttttatcatgaggtgcacaggccggcccattttctcaatttttcaagcttggaagatggt
gacggtgttggagctgatcgagaagatatgtttgcgtaa
DBGET
integrated database retrieval system
