Atta colombica: 108686400
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Entry
108686400 CDS
T11098
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108686400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108686400
03009 Ribosome biogenesis [BR:
acoc03009
]
108686400
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108686400
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108686400
Pre-60S particles
108686400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
Arm
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
TPR_IMB1
Cnd1
HEAT_EF3_N
TPR_IPO5
IBN_N
HEAT_MROH2B_C
TPR_DNAAF5
MMS19_C
PDS5
HEAT_GCN1_C
Adaptin_N
Ltn1_1st
Dopey_N
SCD
HEAT_MROH2B_1st
RTP1_C1
PIK3R4-like_middle
HEAT_DAAF5
INTS7_N
TPR_TTI1_C
XMAP215_CLASP_TOG
CandA_N
Urb2
Motif
Other DBs
NCBI-GeneID:
108686400
NCBI-ProteinID:
XP_018047187
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MKMAWQPQEEGLRQILTLLKESQSPDTATQRAVQQKLEELNKFPDFNNYLIFVLTKLTSE
DEPTRSLSGLILKNNVKTYFHKFLPEVINFVKQECLSAVGDPSPLIRATVGILITTVASR
GELTTWPELLPALCQMLDSQDYNVCEGAFGALQKICEDSAEILDSDALNRPLNILIPKFL
QFFRHSSPKIRSHAIACVNQFIIQRTQALMIHIDSFLENLFHLASDDDSEVRKNVCRALV
MLLEVRMDRLIPHMHNIIEYMLMRTQDVDEGVALEACEFWLSLAEQPICKEALAPHLTRL
VPILVKGMKYSEIDIILLKGDVEEDEMIPDREEDIRPRFHKSKTHHSHHANGMGKQPIVD
ENGINGGCDDEDIDVEDGCDDDSTLSDWNLRKCSAAALDMLANVFREELLPVLVPILKET
LFHQSWEIKESGILALGAIAEGCMSGMIPHLSELIPYLIGCLSDKKALVRAITCWTLSRY
AHWVCAQPHETHLKPLMTELLKRVLDSNKRVQEAACSAFATLEEEACTELVPYLGFILET
LVFAFSKYQHKNLLILYDAIGTLADSVGHHLNRPDYINLLMPPLINKWNVLKDEDKDLFP
LLECLSSVATALRSGFLPYCEPVYRRCVSLVEQTLNQHIASTQSPEQFEAPDKDFMIVAL
DLLSGLAEGLDGHMERLVLNSNVMQLLYQCMQDSMPEVRQSSFALLGDLTKACFQHVLPC
IPEFMPILGQNLHPQFISVCNNATWAIGEISIKLGPDTSAYIPLILAQLIEIINRPDTPK
TLLENTAITIGRLGYVCPHDVAPMLQQFVRQWCTSLRSIRDNEEKDSAFRGMCQMITVNP
AGVVPDFIFFCDAVASWSAPKEDLKEMFQKILFTFKNQVGEENWKRFSDQFPPQLSERLH
NMYGV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcgtggcaaccacaggaggaaggactcaggcaaattctgacgctgctcaag
gagtcgcagagcccggacacggcgactcagcgggccgtacaacaaaaattggaagaattg
aataaatttccggatttcaacaactatctgatttttgttctaacaaaattaacatcagaa
gatgaacctactaggtcattgagtggactgatattaaaaaacaatgtaaagacgtacttc
cataaatttttaccagaggtcataaatttcgtaaagcaagaatgtctgtcagctgtcgga
gatccatcaccgctgattcgtgcgaccgtcggtattttgatcactactgtcgcatcaaga
ggtgaattaacaacttggccagaattgttgccagcgttgtgtcaaatgttagactcgcaa
gattacaacgtttgcgagggtgcgtttggcgctctccagaagatttgtgaggattcggca
gagatattagattcagatgctctaaatcgacccttgaacattctgattccaaagttcctt
cagttctttagacattcaagtcccaagatcagatcccacgcgatagcgtgtgtcaatcaa
tttatcattcaacgcacgcaagcacttatgatacatatagacagctttttggagaatctc
ttccatttagcttcggatgatgattctgaggtccgaaaaaacgtatgcagggcactggta
atgctgctcgaggtacgaatggacagattaataccacatatgcacaatataatagaatat
atgctaatgagaactcaggatgttgacgagggagtggcactggaagcttgtgagttttgg
ttgtcactagcagaacaaccaatttgcaaagaggcacttgcaccacacctgacacgatta
gtacctatcttggtgaaaggtatgaaatattcggaaattgacataattctcctcaaagga
gatgtggaggaggatgaaatgattccagacagagaagaagacatccgaccacgttttcat
aaatctaagacgcatcactcgcatcatgctaacggtatgggcaaacagcccatcgtcgat
gagaacggaataaacggtggatgcgacgatgaggatatagatgttgaggacggatgcgat
gatgattcaactctgagcgattggaacttgaggaagtgctctgccgctgcgttagatatg
ttggctaatgtttttagggaagagcttctaccggttttagtaccgatcttgaaggagact
cttttccatcagtcttgggagatcaaagaatccggtatcttggcactgggagctatcgct
gaaggttgtatgagtggtatgattccacatttgtcggagctcatcccttatttgatcggt
tgtttgagtgacaagaaggctcttgtacgtgccataacttgctggacattgagccgttac
gcacactgggtttgtgcacaacctcacgagacgcatttgaaacctctgatgacggaactg
ctcaaaagagtgcttgatagtaacaaacgtgttcaagaggcggcatgttctgcctttgcg
actttggaagaagaagcatgtaccgaattggttccttatcttggatttattctcgaaacg
ctcgtctttgcatttagtaaatatcagcataaaaatcttttaattctatacgacgccatc
ggtactctcgctgattctgtgggtcatcatctaaacagaccagattacatcaatcttttg
atgccgcctcttattaataagtggaacgtattgaaggatgaagataaagatctgttccca
ttgctggaatgcctttcttcagtagcgaccgcattgcgctcgggtttcttaccgtattgc
gaacctgtgtacaggcgatgcgtatcacttgtggagcaaacgctgaatcaacatatagcg
agcacgcaaagtccggagcaatttgaggcacccgataaagattttatgatagttgcattg
gaccttctcagcggattagcagaaggactggacggtcacatggaacgtttagtgttgaac
agcaacgttatgcagctgttgtatcagtgtatgcaggatagcatgcctgaagtcagacag
agtagcttcgctttgttaggagatcttacaaaagcttgcttccaacacgtgctcccctgc
ataccggagtttatgccaatacttggacaaaacttgcatccgcaattcatatcagtatgt
aacaacgcgacatgggcgatcggtgaaatttcgataaaactcggtcctgacacaagcgcg
tacatcccattaattttggcacagctcatcgaaatcattaatcgaccagacacgccaaaa
acactgttagaaaatacggccataacgatcggtcgcctaggttatgtgtgtccccacgac
gtcgcccccatgttacagcagtttgttcgacagtggtgcacttctttgcgaagcataaga
gataacgaagagaaggattctgccttcagaggcatgtgtcaaatgatcactgtcaatcca
gccggtgttgttccggatttcatcttcttttgtgacgccgtggcgtcgtggtctgcgccg
aaagaggatttaaaggagatgttccagaagatattgtttactttcaaaaatcaagtaggt
gaggagaattggaaacgattttccgatcaatttccgccgcagctgagtgagcggttacat
aacatgtacggcgtttga
DBGET
integrated database retrieval system
